RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CHMP4CQ96CF2 233 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 NBPF4Q96M43 638 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 STRN4Q9NRL3 753 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 KIF24Q5T7B8 1368 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 TNNT1P13805 278 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 PTGS1P23219 599 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 CHRNA2Q15822 529 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 ISM2Q6H9L7 571 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 SSH3Q8TE77 659 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 ZBTB3Q9H5J0 574 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 REREQ9P2R6 1566 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 CCDC171Q6TFL3 1326 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 IQGAP1P46940 1657 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 SBNO1A3KN83 1393 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 AATKQ6ZMQ8 1374 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 TYRO3Q06418 890 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 CCDC129Q6ZRS4 1044 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 RUFY3Q7L099 469 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 LINS1Q8NG48 757 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 RASSF8Q8NHQ8 419 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 POLR3DP05423 398 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 CCDC57Q2TAC2 916 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 ADCK5Q3MIX3 580 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 CCDC158Q5M9N0 1113 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 PPP4R3BQ5MIZ7 849 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 ANKRD13DQ6ZTN6 518 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 CEP57L1Q8IYX8 460 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 FAM200AQ8TCP9 573 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 OSBPL3Q9H4L5 887 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 ZHX1Q9UKY1 873 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 IBTKQ9P2D0 1353 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 IFIT1P09914 478 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 AKAP4Q5JQC9 854 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 VPS53Q5VIR6 699 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 FSIP1Q8NA03 581 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 NFATC2IPQ8NCF5 419 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 DDX19AQ9NUU7 478 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 TTC41PQ6P2S7 1318 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 ADGRB3O60242 1522 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 ALDH1L1O75891 902 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 EIF4A1P60842 406 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 AKAP17AQ02040 695 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 Q6ZUG5 572 aa8.07□□□□□ -1.12
SYNPO2-206ENST00000610556 ROBO2Q9HCK4 1378 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 LRRC7Q96NW7 1537 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 ME3Q16798 604 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 TOM1L2Q6ZVM7 507 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 CDC37L1Q7L3B6 337 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 CCAR1Q8IX12 1150 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 IFT172Q9UG01 1749 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 SERPINC1P01008 464 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 LMBR1LQ6UX01 489 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 MNS1Q8NEH6 495 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 SUCLG2Q96I99 432 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 U3KPZ7 1027 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 QRICH2Q9H0J4 1663 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 DHX16O60231 1041 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 IDH1O75874 414 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 CNNM1Q9NRU3 951 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 NLRP1Q9C000 1473 aa8.06□□□□□ -1.12
SYNPO2-206ENST00000610556 SLC27A2O14975 620 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 IGSF3O75054 1194 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 GCP02774 474 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 GTF2E1P29083 439 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 TFCP2Q12800 502 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 CUL4AQ13619 759 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 PROSER3Q2NL68 480 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 IP6K1Q92551 441 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 CCDC34Q96HJ3 373 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 RNMTO43148 476 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 JAK2O60674 1132 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 LARGE1O95461 756 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 PTPN14Q15678 1187 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 EAF2Q96CJ1 260 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 PRIMPOLQ96LW4 560 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 STAP2Q9UGK3 403 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 PRAMEF22A3QJZ6 481 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 DDIT3P35638 169 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 SAFBQ15424 915 aaKnown RBP eCLIP8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 HSP90AB3PQ58FF7 597 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 TTLL5Q6EMB2 1281 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 KRT28Q7Z3Y7 464 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 CABLES1Q8TDN4 633 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 C8orf76Q96K31 380 aa8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 V9GYY5 206 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-206ENST00000610556 ATP7BP35670 1465 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 DIP2CQ9Y2E4 1556 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 LIG1P18858 919 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 APOBRQ0VD83 1088 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 BEND3Q5T5X7 828 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 OLFM4Q6UX06 510 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 CCDC144CPQ8IYA2 1237 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 PRDM11Q9NQV5 511 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 MTMR6Q9Y217 621 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 ZNF500O60304 480 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 TIMM10P62072 90 aa8.04□□□□□ -1.12
SYNPO2-206ENST00000610556 ERCC4Q92889 916 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms