RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 TEFQ10587 303 aa17.21■□□□□ 0.35
LINC01278-206ENST00000610088 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
LINC01278-206ENST00000610088 NEFMP07197 916 aa17.2■□□□□ 0.34
LINC01278-206ENST00000610088 HUNKP57058 714 aa17.2■□□□□ 0.34
LINC01278-206ENST00000610088 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
LINC01278-206ENST00000610088 ADARB2Q9NS39 739 aaKnown RBP17.2■□□□□ 0.34
LINC01278-206ENST00000610088 SAGE1Q9NXZ1 904 aa17.2■□□□□ 0.34
LINC01278-206ENST00000610088 MRC1P22897 1456 aa17.19■□□□□ 0.34
LINC01278-206ENST00000610088 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
LINC01278-206ENST00000610088 RNF186Q9NXI6 227 aa17.19■□□□□ 0.34
LINC01278-206ENST00000610088 SIPA1L3O60292 1781 aaPredicted RBP17.19■□□□□ 0.34
LINC01278-206ENST00000610088 SCN7AQ01118 1682 aa17.19■□□□□ 0.34
LINC01278-206ENST00000610088 UBR2Q8IWV8 1755 aa17.18■□□□□ 0.34
LINC01278-206ENST00000610088 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
LINC01278-206ENST00000610088 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
LINC01278-206ENST00000610088 PSMD1Q99460 953 aa17.18■□□□□ 0.34
LINC01278-206ENST00000610088 COL4A5P29400 1685 aa17.17■□□□□ 0.34
LINC01278-206ENST00000610088 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
LINC01278-206ENST00000610088 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
LINC01278-206ENST00000610088 ALDH1B1P30837 517 aa17.16■□□□□ 0.34
LINC01278-206ENST00000610088 FXR1P51114 621 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC01278-206ENST00000610088 RTF1Q92541 710 aaKnown RBP17.16■□□□□ 0.34
LINC01278-206ENST00000610088 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
LINC01278-206ENST00000610088 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
LINC01278-206ENST00000610088 DLL1O00548 723 aa17.15■□□□□ 0.34
LINC01278-206ENST00000610088 IL6STP40189 918 aaPredicted RBP17.15■□□□□ 0.34
LINC01278-206ENST00000610088 BCORQ6W2J9 1755 aa17.15■□□□□ 0.34
LINC01278-206ENST00000610088 KLRG2A4D1S0 409 aaPredicted RBP17.14■□□□□ 0.33
LINC01278-206ENST00000610088 A1BGP04217 495 aa17.14■□□□□ 0.33
LINC01278-206ENST00000610088 RGMBQ6NW40 437 aa17.14■□□□□ 0.33
LINC01278-206ENST00000610088 DZIP3Q86Y13 1208 aaKnown RBP17.14■□□□□ 0.33
LINC01278-206ENST00000610088 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
LINC01278-206ENST00000610088 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
LINC01278-206ENST00000610088 FAM155AB1AL88 458 aaPredicted RBP17.13■□□□□ 0.33
LINC01278-206ENST00000610088 TPTE2Q6XPS3 522 aa17.13■□□□□ 0.33
LINC01278-206ENST00000610088 CDC37L1Q7L3B6 337 aa17.13■□□□□ 0.33
LINC01278-206ENST00000610088 USP48Q86UV5 1035 aa17.13■□□□□ 0.33
LINC01278-206ENST00000610088 HDAC9Q9UKV0 1011 aa17.13■□□□□ 0.33
LINC01278-206ENST00000610088 ZNF157P51786 506 aaPredicted RBP17.12■□□□□ 0.33
LINC01278-206ENST00000610088 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
LINC01278-206ENST00000610088 IL17REQ8NFR9 667 aa17.12■□□□□ 0.33
LINC01278-206ENST00000610088 PHACTR3Q96KR7 559 aa17.12■□□□□ 0.33
LINC01278-206ENST00000610088 GMPSP49915 693 aaPredicted RBP17.11■□□□□ 0.33
LINC01278-206ENST00000610088 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
LINC01278-206ENST00000610088 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
LINC01278-206ENST00000610088 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
LINC01278-206ENST00000610088 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
LINC01278-206ENST00000610088 MKI67P46013 3256 aaKnown RBP17.11■□□□□ 0.33
LINC01278-206ENST00000610088 TCERG1O14776 1098 aaKnown RBP17.1■□□□□ 0.33
LINC01278-206ENST00000610088 PPIP5K2O43314 1243 aa17.1■□□□□ 0.33
LINC01278-206ENST00000610088 GTF2E1P29083 439 aaPredicted RBP17.1■□□□□ 0.33
LINC01278-206ENST00000610088 PKN2Q16513 984 aaKnown RBP17.1■□□□□ 0.33
LINC01278-206ENST00000610088 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
LINC01278-206ENST00000610088 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
LINC01278-206ENST00000610088 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
LINC01278-206ENST00000610088 PIP4K2AP48426 406 aaPredicted RBP17.09■□□□□ 0.33
LINC01278-206ENST00000610088 HIRAP54198 1017 aaPredicted RBP17.09■□□□□ 0.33
LINC01278-206ENST00000610088 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
LINC01278-206ENST00000610088 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
LINC01278-206ENST00000610088 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
LINC01278-206ENST00000610088 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
LINC01278-206ENST00000610088 CSRNP1Q96S65 589 aa17.09■□□□□ 0.33
LINC01278-206ENST00000610088 BCL2L13Q9BXK5 485 aa17.09■□□□□ 0.33
LINC01278-206ENST00000610088 NIP7Q9Y221 180 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC01278-206ENST00000610088 ZNF652Q9Y2D9 606 aa17.09■□□□□ 0.33
LINC01278-206ENST00000610088 HEG1Q9ULI3 1381 aa17.09■□□□□ 0.33
LINC01278-206ENST00000610088 SNED1Q8TER0 1413 aa17.09■□□□□ 0.33
LINC01278-206ENST00000610088 RALBP1Q15311 655 aa17.08■□□□□ 0.32
LINC01278-206ENST00000610088 C2orf69Q8N8R5 385 aa17.08■□□□□ 0.32
LINC01278-206ENST00000610088 TRPM4Q8TD43 1214 aa17.08■□□□□ 0.32
LINC01278-206ENST00000610088 MAPK8IP3Q9UPT6 1336 aa17.07■□□□□ 0.32
LINC01278-206ENST00000610088 CXCL9Q07325 125 aa17.07■□□□□ 0.32
LINC01278-206ENST00000610088 AOC3Q16853 763 aa17.07■□□□□ 0.32
LINC01278-206ENST00000610088 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
LINC01278-206ENST00000610088 GBA2Q9HCG7 927 aaPredicted RBP17.07■□□□□ 0.32
LINC01278-206ENST00000610088 CEMIPQ8WUJ3 1361 aa17.06■□□□□ 0.32
LINC01278-206ENST00000610088 CLEC4GQ6UXB4 293 aa17.06■□□□□ 0.32
LINC01278-206ENST00000610088 MCM10Q7L590 875 aa17.06■□□□□ 0.32
LINC01278-206ENST00000610088 HTATSF1O43719 755 aaKnown RBP17.05■□□□□ 0.32
LINC01278-206ENST00000610088 RPGRQ92834 1020 aaKnown RBP17.05■□□□□ 0.32
LINC01278-206ENST00000610088 AKAP11Q9UKA4 1901 aa17.05■□□□□ 0.32
LINC01278-206ENST00000610088 SLC10A3P09131 477 aa17.04■□□□□ 0.32
LINC01278-206ENST00000610088 GRIPAP1Q4V328 841 aa17.04■□□□□ 0.32
LINC01278-206ENST00000610088 SLC17A8Q8NDX2 589 aa17.04■□□□□ 0.32
LINC01278-206ENST00000610088 ZNF296Q8WUU4 475 aaPredicted RBP17.04■□□□□ 0.32
LINC01278-206ENST00000610088 ZNRF3Q9ULT6 936 aa17.04■□□□□ 0.32
LINC01278-206ENST00000610088 SHTN1A0MZ66 631 aa17.03■□□□□ 0.32
LINC01278-206ENST00000610088 FBXO46Q6PJ61 603 aaPredicted RBP17.03■□□□□ 0.32
LINC01278-206ENST00000610088 KRT26Q7Z3Y9 468 aa17.03■□□□□ 0.32
LINC01278-206ENST00000610088 CNOT7Q9UIV1 285 aaKnown RBP17.03■□□□□ 0.32
LINC01278-206ENST00000610088 H7C1D1 291 aa17.02■□□□□ 0.32
LINC01278-206ENST00000610088 PPEF1O14829 653 aaPredicted RBP17.02■□□□□ 0.32
LINC01278-206ENST00000610088 RAD17O75943 681 aa17.02■□□□□ 0.32
LINC01278-206ENST00000610088 TBC1D8O95759 1140 aa17.02■□□□□ 0.32
LINC01278-206ENST00000610088 DCTN1Q14203 1278 aa17.02■□□□□ 0.32
LINC01278-206ENST00000610088 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
LINC01278-206ENST00000610088 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
LINC01278-206ENST00000610088 TMX4Q9H1E5 349 aaPredicted RBP17.01■□□□□ 0.31
LINC01278-206ENST00000610088 COLQQ9Y215 455 aaPredicted RBP17.01■□□□□ 0.31
LINC01278-206ENST00000610088 LAMB4A4D0S4 1761 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms