RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 FOXO4P98177 505 aa27.24■■□□□ 1.95
USF2-216ENST00000607959 RABL6Q3YEC7 729 aaPredicted RBP27.24■■□□□ 1.95
USF2-216ENST00000607959 TNS1Q9HBL0 1735 aaKnown RBP27.23■■□□□ 1.95
USF2-216ENST00000607959 GNPATO15228 680 aa27.23■■□□□ 1.95
USF2-216ENST00000607959 SMARCA5O60264 1052 aaPredicted RBP27.23■■□□□ 1.95
USF2-216ENST00000607959 TSHZ2Q9NRE2 1034 aa27.23■■□□□ 1.95
USF2-216ENST00000607959 APBB1O00213 710 aa27.22■■□□□ 1.95
USF2-216ENST00000607959 SYNE4Q8N205 404 aa27.22■■□□□ 1.95
USF2-216ENST00000607959 SCN7AQ01118 1682 aa27.22■■□□□ 1.95
USF2-216ENST00000607959 PCCAP05165 728 aaPredicted RBP27.21■■□□□ 1.95
USF2-216ENST00000607959 SLC27A3Q5K4L6 730 aa27.21■■□□□ 1.95
USF2-216ENST00000607959 FAM89AQ96GI7 184 aa27.2■■□□□ 1.95
USF2-216ENST00000607959 BCL2L12Q9HB09 334 aa27.2■■□□□ 1.95
USF2-216ENST00000607959 TXNRD1Q16881 649 aa27.2■■□□□ 1.94
USF2-216ENST00000607959 C16orf71Q8IYS4 520 aaPredicted RBP27.2■■□□□ 1.94
USF2-216ENST00000607959 PA2G4Q9UQ80 394 aaKnown RBP27.2■■□□□ 1.94
USF2-216ENST00000607959 NOP58Q9Y2X3 529 aaKnown RBP27.2■■□□□ 1.94
USF2-216ENST00000607959 UBR3Q6ZT12 1888 aa27.19■■□□□ 1.94
USF2-216ENST00000607959 C4AP0C0L4 1744 aa27.19■■□□□ 1.94
USF2-216ENST00000607959 ZBTB38Q8NAP3 1195 aaPredicted RBP27.19■■□□□ 1.94
USF2-216ENST00000607959 PLSCR1O15162 318 aa27.18■■□□□ 1.94
USF2-216ENST00000607959 RFX5P48382 616 aaPredicted RBP27.18■■□□□ 1.94
USF2-216ENST00000607959 SURF6O75683 361 aaKnown RBP27.18■■□□□ 1.94
USF2-216ENST00000607959 OTUD7AQ8TE49 926 aaPredicted RBP27.18■■□□□ 1.94
USF2-216ENST00000607959 RTCBQ9Y3I0 505 aaKnown RBP27.18■■□□□ 1.94
USF2-216ENST00000607959 APBA3O96018 575 aa27.17■■□□□ 1.94
USF2-216ENST00000607959 ARHGEF1Q92888 912 aaKnown RBP27.17■■□□□ 1.94
USF2-216ENST00000607959 SRP68Q9UHB9 627 aaKnown RBP27.17■■□□□ 1.94
USF2-216ENST00000607959 LMBR1LQ6UX01 489 aa27.16■■□□□ 1.94
USF2-216ENST00000607959 NARFQ9UHQ1 456 aa27.16■■□□□ 1.94
USF2-216ENST00000607959 SUSD4Q5VX71 490 aa27.16■■□□□ 1.94
USF2-216ENST00000607959 KLHDC4Q8TBB5 520 aa27.16■■□□□ 1.94
USF2-216ENST00000607959 CDHR2Q9BYE9 1310 aa27.15■■□□□ 1.94
USF2-216ENST00000607959 CLEC4GQ6UXB4 293 aa27.15■■□□□ 1.94
USF2-216ENST00000607959 PLA2G12BQ9BX93 195 aa27.15■■□□□ 1.94
USF2-216ENST00000607959 AK7Q96M32 723 aa27.14■■□□□ 1.94
USF2-216ENST00000607959 USPL1Q5W0Q7 1092 aa27.14■■□□□ 1.93
USF2-216ENST00000607959 LRRCC1Q9C099 1032 aa27.14■■□□□ 1.93
USF2-216ENST00000607959 TRMT112Q9UI30 125 aaKnown RBP27.14■■□□□ 1.93
USF2-216ENST00000607959 RGL2O15211 777 aa27.13■■□□□ 1.93
USF2-216ENST00000607959 PLEKHM2Q8IWE5 1019 aa27.13■■□□□ 1.93
USF2-216ENST00000607959 NIP7Q9Y221 180 aaKnown RBP eCLIP27.13■■□□□ 1.93
USF2-216ENST00000607959 PTPN12Q05209 780 aaKnown RBP27.12■■□□□ 1.93
USF2-216ENST00000607959 RAB11FIP3O75154 756 aa27.12■■□□□ 1.93
USF2-216ENST00000607959 PHF14O94880 888 aa27.11■■□□□ 1.93
USF2-216ENST00000607959 RHPN1Q8TCX5 695 aa27.11■■□□□ 1.93
USF2-216ENST00000607959 COPRSQ9NQ92 184 aa27.11■■□□□ 1.93
USF2-216ENST00000607959 ZNF652Q9Y2D9 606 aa27.11■■□□□ 1.93
USF2-216ENST00000607959 SALL3Q9BXA9 1300 aa27.11■■□□□ 1.93
USF2-216ENST00000607959 NTSR2O95665 410 aa27.1■■□□□ 1.93
USF2-216ENST00000607959 PARP10Q53GL7 1025 aa27.1■■□□□ 1.93
USF2-216ENST00000607959 BCL11AQ9H165 835 aa27.1■■□□□ 1.93
USF2-216ENST00000607959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.1■■□□□ 1.93
USF2-216ENST00000607959 RGPD3A6NKT7 1758 aaPredicted RBP27.1■■□□□ 1.93
USF2-216ENST00000607959 RGPD4Q7Z3J3 1758 aa27.1■■□□□ 1.93
USF2-216ENST00000607959 CSF1RP07333 972 aa27.1■■□□□ 1.93
USF2-216ENST00000607959 C8orf34Q49A92 452 aa27.1■■□□□ 1.93
USF2-216ENST00000607959 TBC1D9BQ66K14 1250 aa27.1■■□□□ 1.93
USF2-216ENST00000607959 USP42Q9H9J4 1324 aaKnown RBP27.09■■□□□ 1.93
USF2-216ENST00000607959 IRS4O14654 1257 aaPredicted RBP27.09■■□□□ 1.93
USF2-216ENST00000607959 TRAPPC3LQ5T215 181 aa27.09■■□□□ 1.93
USF2-216ENST00000607959 IL1RAPL2Q9NP60 686 aa27.09■■□□□ 1.93
USF2-216ENST00000607959 MYH3P11055 1940 aa27.09■■□□□ 1.93
USF2-216ENST00000607959 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.08■■□□□ 1.93
USF2-216ENST00000607959 FAM177BA6PVY3 158 aa27.08■■□□□ 1.93
USF2-216ENST00000607959 SASH1O94885 1247 aa27.08■■□□□ 1.93
USF2-216ENST00000607959 ILDR1Q86SU0 546 aaPredicted RBP27.08■■□□□ 1.93
USF2-216ENST00000607959 UTP14AQ9BVJ6 771 aaKnown RBP27.08■■□□□ 1.93
USF2-216ENST00000607959 BACH2Q9BYV9 841 aa27.08■■□□□ 1.93
USF2-216ENST00000607959 DDX60Q8IY21 1712 aaKnown RBP27.08■■□□□ 1.93
USF2-216ENST00000607959 SIL1Q9H173 461 aa27.08■■□□□ 1.93
USF2-216ENST00000607959 COL24A1Q17RW2 1714 aa27.07■■□□□ 1.92
USF2-216ENST00000607959 ZNF827Q17R98 1081 aa27.07■■□□□ 1.92
USF2-216ENST00000607959 HSP90AB4PQ58FF6 505 aa27.07■■□□□ 1.92
USF2-216ENST00000607959 KIF1BPQ96EK5 621 aa27.07■■□□□ 1.92
USF2-216ENST00000607959 ZPR1O75312 459 aa27.06■■□□□ 1.92
USF2-216ENST00000607959 ADRA2BP18089 450 aa27.06■■□□□ 1.92
USF2-216ENST00000607959 TTLL11Q8NHH1 800 aa27.06■■□□□ 1.92
USF2-216ENST00000607959 ZBTB47Q9UFB7 747 aaPredicted RBP27.06■■□□□ 1.92
USF2-216ENST00000607959 CHMP3Q9Y3E7 222 aa27.06■■□□□ 1.92
USF2-216ENST00000607959 SH3TC1Q8TE82 1336 aa27.06■■□□□ 1.92
USF2-216ENST00000607959 RFC4P35249 363 aa27.05■■□□□ 1.92
USF2-216ENST00000607959 AKT1S1Q96B36 256 aa27.05■■□□□ 1.92
USF2-216ENST00000607959 LAMB2P55268 1798 aa27.05■■□□□ 1.92
USF2-216ENST00000607959 TUBGCP6Q96RT7 1819 aa27.05■■□□□ 1.92
USF2-216ENST00000607959 SSFA2P28290 1259 aa27.04■■□□□ 1.92
USF2-216ENST00000607959 FAM161AQ3B820 660 aa27.04■■□□□ 1.92
USF2-216ENST00000607959 HCLS1P14317 486 aaPredicted RBP27.04■■□□□ 1.92
USF2-216ENST00000607959 CTSWP56202 376 aa27.04■■□□□ 1.92
USF2-216ENST00000607959 BICDL1Q6ZP65 573 aa27.04■■□□□ 1.92
USF2-216ENST00000607959 NUTM1Q86Y26 1132 aa27.04■■□□□ 1.92
USF2-216ENST00000607959 CCDC85AQ96PX6 553 aaPredicted RBP27.04■■□□□ 1.92
USF2-216ENST00000607959 PDE8AO60658 829 aa27.03■■□□□ 1.92
USF2-216ENST00000607959 G3BP1Q13283 466 aaKnown RBP eCLIP27.03■■□□□ 1.92
USF2-216ENST00000607959 OS9Q13438 667 aaPredicted RBP27.03■■□□□ 1.92
USF2-216ENST00000607959 ZNF594Q96JF6 807 aaPredicted RBP27.03■■□□□ 1.92
USF2-216ENST00000607959 GSPT1P15170 499 aaKnown RBP27.02■■□□□ 1.92
USF2-216ENST00000607959 PDE1AP54750 535 aa27.02■■□□□ 1.92
USF2-216ENST00000607959 ATG9AQ7Z3C6 839 aa27.02■■□□□ 1.92
USF2-216ENST00000607959 ERC1Q8IUD2 1116 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms