RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 USP17L10C9JJH3 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L13C9JLJ4 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L12C9JPN9 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L11C9JVI0 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L21D6R901 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L18D6R9N7 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L22D6RA61 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L17D6RBQ6 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L19D6RCP7 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L20D6RJB6 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 KCNQ4P56696 695 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 TBC1D8BQ0IIM8 1120 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 USP17L24Q0WX57 530 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
LINC00458-206ENST00000607494 BTLAQ7Z6A9 289 aa10.77□□□□□ -0.69
LINC00458-206ENST00000607494 SPATA31C1P0DKV0 1188 aa10.76□□□□□ -0.69
LINC00458-206ENST00000607494 DOC2BQ14184 412 aa10.76□□□□□ -0.69
LINC00458-206ENST00000607494 MICALL1Q8N3F8 863 aa10.76□□□□□ -0.69
LINC00458-206ENST00000607494 LMOD1P29536 600 aaPredicted RBP10.75□□□□□ -0.69
LINC00458-206ENST00000607494 STAG2Q8N3U4 1231 aa10.75□□□□□ -0.69
LINC00458-206ENST00000607494 BCS1LQ9Y276 419 aa10.75□□□□□ -0.69
LINC00458-206ENST00000607494 ARXQ96QS3 562 aa10.74□□□□□ -0.69
LINC00458-206ENST00000607494 IGFLR1Q9H665 355 aa10.74□□□□□ -0.69
LINC00458-206ENST00000607494 NID1P14543 1247 aa10.73□□□□□ -0.69
LINC00458-206ENST00000607494 ITGB7P26010 798 aa10.73□□□□□ -0.69
LINC00458-206ENST00000607494 NEUROD1Q13562 356 aa10.73□□□□□ -0.69
LINC00458-206ENST00000607494 ANKMY2Q8IV38 441 aa10.73□□□□□ -0.69
LINC00458-206ENST00000607494 A6NJR5 290 aa10.72□□□□□ -0.69
LINC00458-206ENST00000607494 GRNP28799 593 aaKnown RBP10.72□□□□□ -0.69
LINC00458-206ENST00000607494 XP32Q5T750 250 aa10.72□□□□□ -0.69
LINC00458-206ENST00000607494 C20orf204Q6ZNR8 217 aa10.72□□□□□ -0.69
LINC00458-206ENST00000607494 C14orf37Q86TY3 774 aa10.72□□□□□ -0.69
LINC00458-206ENST00000607494 UBE2OQ9C0C9 1292 aaKnown RBP10.72□□□□□ -0.69
LINC00458-206ENST00000607494 RTN1Q16799 776 aa10.71□□□□□ -0.69
LINC00458-206ENST00000607494 KLK14Q9P0G3 267 aa10.71□□□□□ -0.69
LINC00458-206ENST00000607494 FAM196BA6NMK8 535 aa10.7□□□□□ -0.7
LINC00458-206ENST00000607494 DMGDHQ9UI17 866 aaKnown RBP10.7□□□□□ -0.7
LINC00458-206ENST00000607494 NAGPAQ9UK23 515 aa10.7□□□□□ -0.7
LINC00458-206ENST00000607494 SLC6A14Q9UN76 642 aa10.7□□□□□ -0.7
LINC00458-206ENST00000607494 TGFBR3LH3BV60 316 aa10.69□□□□□ -0.7
LINC00458-206ENST00000607494 IGFBP4P22692 258 aa10.69□□□□□ -0.7
LINC00458-206ENST00000607494 GATA4P43694 442 aa10.69□□□□□ -0.7
LINC00458-206ENST00000607494 GRIK4Q16099 956 aa10.69□□□□□ -0.7
LINC00458-206ENST00000607494 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
LINC00458-206ENST00000607494 PRRT3Q5FWE3 981 aa10.69□□□□□ -0.7
LINC00458-206ENST00000607494 NUDT8Q8WV74 236 aa10.69□□□□□ -0.7
LINC00458-206ENST00000607494 VRTNQ9H8Y1 702 aa10.69□□□□□ -0.7
LINC00458-206ENST00000607494 PRDM6Q9NQX0 595 aa10.69□□□□□ -0.7
LINC00458-206ENST00000607494 NFKB1P19838 968 aa10.68□□□□□ -0.7
LINC00458-206ENST00000607494 CFAP70Q5T0N1 1121 aa10.68□□□□□ -0.7
LINC00458-206ENST00000607494 GSX2Q9BZM3 304 aa10.68□□□□□ -0.7
LINC00458-206ENST00000607494 IER5Q5VY09 327 aa10.67□□□□□ -0.7
LINC00458-206ENST00000607494 SEMA6BQ9H3T3 888 aa10.67□□□□□ -0.7
LINC00458-206ENST00000607494 QTRT2Q9H974 415 aaKnown RBP10.67□□□□□ -0.7
LINC00458-206ENST00000607494 DNAJB12Q9NXW2 375 aaKnown RBP10.67□□□□□ -0.7
LINC00458-206ENST00000607494 ZNF777Q9ULD5 760 aaPredicted RBP10.67□□□□□ -0.7
LINC00458-206ENST00000607494 SPDYE3A6NKU9 549 aa10.66□□□□□ -0.7
LINC00458-206ENST00000607494 DGKZQ13574 1117 aa10.66□□□□□ -0.7
LINC00458-206ENST00000607494 HIF1AQ16665 826 aa10.66□□□□□ -0.7
LINC00458-206ENST00000607494 JPH1Q9HDC5 661 aaPredicted RBP10.66□□□□□ -0.7
LINC00458-206ENST00000607494 IDH3AP50213 366 aa10.65□□□□□ -0.7
LINC00458-206ENST00000607494 KRT25Q7Z3Z0 450 aa10.65□□□□□ -0.7
LINC00458-206ENST00000607494 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.65□□□□□ -0.7
LINC00458-206ENST00000607494 LILRB5O75023 590 aa10.64□□□□□ -0.71
LINC00458-206ENST00000607494 APBA3O96018 575 aa10.64□□□□□ -0.71
LINC00458-206ENST00000607494 WEE1P30291 646 aa10.64□□□□□ -0.71
LINC00458-206ENST00000607494 TRIM28Q13263 835 aaKnown RBP10.64□□□□□ -0.71
LINC00458-206ENST00000607494 TRAPPC3LQ5T215 181 aa10.64□□□□□ -0.71
LINC00458-206ENST00000607494 PSAPL1Q6NUJ1 521 aa10.64□□□□□ -0.71
LINC00458-206ENST00000607494 PNMA5Q96PV4 448 aa10.64□□□□□ -0.71
LINC00458-206ENST00000607494 TPSG1Q9NRR2 321 aa10.64□□□□□ -0.71
LINC00458-206ENST00000607494 USP20Q9Y2K6 914 aa10.64□□□□□ -0.71
LINC00458-206ENST00000607494 INPP5BP32019 993 aa10.63□□□□□ -0.71
LINC00458-206ENST00000607494 CCINQ13939 588 aa10.63□□□□□ -0.71
LINC00458-206ENST00000607494 RFX1P22670 979 aa10.62□□□□□ -0.71
LINC00458-206ENST00000607494 RSPO4Q2I0M5 234 aaPredicted RBP10.62□□□□□ -0.71
LINC00458-206ENST00000607494 Q8N3U1 123 aa10.62□□□□□ -0.71
LINC00458-206ENST00000607494 ZFATQ9P243 1243 aa10.62□□□□□ -0.71
LINC00458-206ENST00000607494 LRFN2Q9ULH4 789 aa10.61□□□□□ -0.71
LINC00458-206ENST00000607494 A0A0A0MRY4 1105 aa10.6□□□□□ -0.71
LINC00458-206ENST00000607494 AFF1P51825 1210 aaKnown RBP10.6□□□□□ -0.71
LINC00458-206ENST00000607494 MLLT1Q03111 559 aaPredicted RBP10.6□□□□□ -0.71
LINC00458-206ENST00000607494 PLAURQ03405 335 aa10.6□□□□□ -0.71
LINC00458-206ENST00000607494 SHISA2Q6UWI4 295 aa10.6□□□□□ -0.71
LINC00458-206ENST00000607494 FOXO3O43524 673 aa10.59□□□□□ -0.71
LINC00458-206ENST00000607494 CPB1P15086 417 aa10.59□□□□□ -0.71
LINC00458-206ENST00000607494 SELPP16109 830 aa10.59□□□□□ -0.71
LINC00458-206ENST00000607494 TARSP26639 723 aaKnown RBP10.59□□□□□ -0.71
LINC00458-206ENST00000607494 FKBP5Q13451 457 aaPredicted RBP10.58□□□□□ -0.72
LINC00458-206ENST00000607494 NKAPLQ5M9Q1 402 aa10.58□□□□□ -0.72
LINC00458-206ENST00000607494 FAM35AQ86V20 835 aa10.58□□□□□ -0.72
LINC00458-206ENST00000607494 FAM200AQ8TCP9 573 aa10.58□□□□□ -0.72
LINC00458-206ENST00000607494 VTI1AQ96AJ9 217 aa10.58□□□□□ -0.72
LINC00458-206ENST00000607494 IFT43Q96FT9 208 aa10.58□□□□□ -0.72
LINC00458-206ENST00000607494 ZBTB42B2RXF5 422 aa10.57□□□□□ -0.72
LINC00458-206ENST00000607494 SASH3O75995 380 aa10.57□□□□□ -0.72
LINC00458-206ENST00000607494 MICAL2O94851 1124 aa10.57□□□□□ -0.72
LINC00458-206ENST00000607494 EPB42P16452 691 aa10.57□□□□□ -0.72
LINC00458-206ENST00000607494 ARSDP51689 593 aa10.57□□□□□ -0.72
LINC00458-206ENST00000607494 DMRTC2Q8IXT2 367 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms