RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 GOLGA8FQ08AF8 430 aa18.17■□□□□ 0.5
RER1-209ENST00000605895 GOLGA8DPQ0D2H9 430 aa18.17■□□□□ 0.5
RER1-209ENST00000605895 SNW1Q13573 536 aaKnown RBP18.17■□□□□ 0.5
RER1-209ENST00000605895 SYCP1Q15431 976 aa18.17■□□□□ 0.5
RER1-209ENST00000605895 PAXIP1Q6ZW49 1069 aaPredicted RBP18.17■□□□□ 0.5
RER1-209ENST00000605895 SMC2O95347 1197 aa18.17■□□□□ 0.5
RER1-209ENST00000605895 H3BQV1 296 aa18.16■□□□□ 0.5
RER1-209ENST00000605895 CCZ1BP86790 482 aa18.16■□□□□ 0.5
RER1-209ENST00000605895 CCZ1P86791 482 aaPredicted RBP18.16■□□□□ 0.5
RER1-209ENST00000605895 IFFO2Q5TF58 517 aa18.16■□□□□ 0.5
RER1-209ENST00000605895 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
RER1-209ENST00000605895 TRIM66O15016 1216 aa18.16■□□□□ 0.5
RER1-209ENST00000605895 HSP90B1P14625 803 aaKnown RBP18.16■□□□□ 0.5
RER1-209ENST00000605895 RAD51AP2Q09MP3 1159 aa18.16■□□□□ 0.5
RER1-209ENST00000605895 NYAP1Q6ZVC0 841 aa18.16■□□□□ 0.5
RER1-209ENST00000605895 C10orf67Q8IYJ2 551 aa18.16■□□□□ 0.5
RER1-209ENST00000605895 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
RER1-209ENST00000605895 DNAJC2Q99543 621 aaKnown RBP18.16■□□□□ 0.5
RER1-209ENST00000605895 SIL1Q9H173 461 aa18.16■□□□□ 0.5
RER1-209ENST00000605895 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 DDX19AQ9NUU7 478 aaKnown RBP18.15■□□□□ 0.5
RER1-209ENST00000605895 FHOD1Q9Y613 1164 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 NDUFB9Q9Y6M9 179 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 CHGBP05060 677 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 SCAND2PQ9GZW5 306 aaPredicted RBP18.15■□□□□ 0.5
RER1-209ENST00000605895 DLG5Q8TDM6 1919 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 SSH2Q76I76 1423 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 PNMA6AP0CW24 399 aaPredicted RBP18.15■□□□□ 0.5
RER1-209ENST00000605895 PLA2G4AP47712 749 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 BMS1Q14692 1282 aaKnown RBP18.15■□□□□ 0.5
RER1-209ENST00000605895 BRF1Q92994 677 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 CCDC8Q9H0W5 538 aaPredicted RBP18.15■□□□□ 0.5
RER1-209ENST00000605895 ZSWIM6Q9HCJ5 1215 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 DNAI1Q9UI46 699 aa18.15■□□□□ 0.5
RER1-209ENST00000605895 PPLO60437 1756 aa18.14■□□□□ 0.5
RER1-209ENST00000605895 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
RER1-209ENST00000605895 NPHP3Q7Z494 1330 aa18.14■□□□□ 0.49
RER1-209ENST00000605895 IQCB1Q15051 598 aa18.14■□□□□ 0.49
RER1-209ENST00000605895 KRBA2Q6ZNG9 492 aa18.14■□□□□ 0.49
RER1-209ENST00000605895 TMC6Q7Z403 805 aa18.14■□□□□ 0.49
RER1-209ENST00000605895 EDC3Q96F86 508 aaKnown RBP18.14■□□□□ 0.49
RER1-209ENST00000605895 GNL2Q13823 731 aaKnown RBP18.14■□□□□ 0.49
RER1-209ENST00000605895 NUDT16Q96DE0 195 aaKnown RBP18.14■□□□□ 0.49
RER1-209ENST00000605895 POGZQ7Z3K3 1410 aa18.14■□□□□ 0.49
RER1-209ENST00000605895 CYP2C19P33261 490 aa18.13■□□□□ 0.49
RER1-209ENST00000605895 CCAR1Q8IX12 1150 aaKnown RBP18.13■□□□□ 0.49
RER1-209ENST00000605895 ZSCAN31Q96LW9 406 aaPredicted RBP18.13■□□□□ 0.49
RER1-209ENST00000605895 SH2B1Q9NRF2 756 aaPredicted RBP18.13■□□□□ 0.49
RER1-209ENST00000605895 FEZ2Q9UHY8 353 aaPredicted RBP18.13■□□□□ 0.49
RER1-209ENST00000605895 SKIDA1Q1XH10 827 aa18.13■□□□□ 0.49
RER1-209ENST00000605895 LCMT1Q9UIC8 334 aa18.13■□□□□ 0.49
RER1-209ENST00000605895 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
RER1-209ENST00000605895 BLOC1S2Q6QNY1 142 aa18.12■□□□□ 0.49
RER1-209ENST00000605895 GOLPH3LQ9H4A5 285 aa18.12■□□□□ 0.49
RER1-209ENST00000605895 URI1O94763 535 aaPredicted RBP18.12■□□□□ 0.49
RER1-209ENST00000605895 NMIQ13287 307 aaPredicted RBP18.12■□□□□ 0.49
RER1-209ENST00000605895 HSP90AA4PQ58FG1 418 aa18.12■□□□□ 0.49
RER1-209ENST00000605895 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.12■□□□□ 0.49
RER1-209ENST00000605895 SMARCE1Q969G3 411 aa18.12■□□□□ 0.49
RER1-209ENST00000605895 BOLA2Q9H3K6 86 aa18.12■□□□□ 0.49
RER1-209ENST00000605895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.12■□□□□ 0.49
RER1-209ENST00000605895 CCDC30Q5VVM6 783 aa18.12■□□□□ 0.49
RER1-209ENST00000605895 E4F1Q66K89 784 aaPredicted RBP18.12■□□□□ 0.49
RER1-209ENST00000605895 ZSWIM4Q9H7M6 989 aa18.12■□□□□ 0.49
RER1-209ENST00000605895 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
RER1-209ENST00000605895 KIF1BPQ96EK5 621 aa18.11■□□□□ 0.49
RER1-209ENST00000605895 RSPH14Q9UHP6 348 aa18.11■□□□□ 0.49
RER1-209ENST00000605895 PTPRMP28827 1452 aa18.11■□□□□ 0.49
RER1-209ENST00000605895 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
RER1-209ENST00000605895 TTC21AQ8NDW8 1320 aa18.11■□□□□ 0.49
RER1-209ENST00000605895 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
RER1-209ENST00000605895 AACSQ86V21 672 aa18.1■□□□□ 0.49
RER1-209ENST00000605895 SSH3Q8TE77 659 aa18.1■□□□□ 0.49
RER1-209ENST00000605895 UBXN4Q92575 508 aa18.1■□□□□ 0.49
RER1-209ENST00000605895 ANKRD65E5RJM6 399 aa18.1■□□□□ 0.49
RER1-209ENST00000605895 PPP1R13BQ96KQ4 1090 aa18.1■□□□□ 0.49
RER1-209ENST00000605895 SEC62Q99442 399 aaKnown RBP18.1■□□□□ 0.49
RER1-209ENST00000605895 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.1■□□□□ 0.49
RER1-209ENST00000605895 IFNKQ9P0W0 207 aa18.1■□□□□ 0.49
RER1-209ENST00000605895 SLC27A2O14975 620 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 TMCO3Q6UWJ1 677 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 RUFY2Q8WXA3 655 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 CPSF1Q10570 1443 aaKnown RBP18.09■□□□□ 0.49
RER1-209ENST00000605895 ME1P48163 572 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 NECTIN1Q15223 517 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 DHX40Q8IX18 779 aaKnown RBP18.09■□□□□ 0.49
RER1-209ENST00000605895 MNS1Q8NEH6 495 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 SDF4Q9BRK5 362 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 CARD6Q9BX69 1037 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 A0A0D9SFI3 127 aa18.09■□□□□ 0.49
RER1-209ENST00000605895 HTATSF1O43719 755 aaKnown RBP18.09■□□□□ 0.49
RER1-209ENST00000605895 PDCP20941 246 aa18.08■□□□□ 0.49
RER1-209ENST00000605895 CCT2P78371 535 aaKnown RBP18.08■□□□□ 0.49
RER1-209ENST00000605895 CLASRPQ8N2M8 674 aaKnown RBP18.08■□□□□ 0.49
RER1-209ENST00000605895 XPO4Q9C0E2 1151 aaKnown RBP18.08■□□□□ 0.49
RER1-209ENST00000605895 TULP2O00295 520 aa18.08■□□□□ 0.48
RER1-209ENST00000605895 TOB2Q14106 344 aaPredicted RBP18.08■□□□□ 0.48
RER1-209ENST00000605895 MLECQ14165 292 aa18.08■□□□□ 0.48
RER1-209ENST00000605895 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.08■□□□□ 0.481e-6■□□□□ 10.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms