RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 LTBP1Q14766 1721 aa27.58■■■□□ 2.01
VIM-AS1-202ENST00000605833 ITGBL1O95965 494 aaPredicted RBP27.58■■■□□ 2.01
VIM-AS1-202ENST00000605833 RPGRQ92834 1020 aaKnown RBP27.58■■■□□ 2.01
VIM-AS1-202ENST00000605833 RIC1Q4ADV7 1423 aa27.58■■■□□ 2
VIM-AS1-202ENST00000605833 PSMD1Q99460 953 aa27.57■■■□□ 2
VIM-AS1-202ENST00000605833 IBTKQ9P2D0 1353 aaPredicted RBP27.57■■■□□ 2
VIM-AS1-202ENST00000605833 TMEM88BA6NKF7 163 aa27.56■■■□□ 2
VIM-AS1-202ENST00000605833 SUSD4Q5VX71 490 aa27.56■■■□□ 2
VIM-AS1-202ENST00000605833 MAP1SQ66K74 1059 aaPredicted RBP27.56■■■□□ 2
VIM-AS1-202ENST00000605833 FOXN1O15353 648 aa27.55■■■□□ 2
VIM-AS1-202ENST00000605833 GPC2Q8N158 579 aa27.55■■■□□ 2
VIM-AS1-202ENST00000605833 JDP2Q8WYK2 163 aa27.55■■■□□ 2
VIM-AS1-202ENST00000605833 TCERG1O14776 1098 aaKnown RBP27.54■■■□□ 2
VIM-AS1-202ENST00000605833 VEGFBP49765 207 aa27.54■■■□□ 2
VIM-AS1-202ENST00000605833 C3orf67Q6ZVT6 689 aa27.54■■■□□ 2
VIM-AS1-202ENST00000605833 MAPK8IP3Q9UPT6 1336 aa27.54■■■□□ 2
VIM-AS1-202ENST00000605833 GJA3Q9Y6H8 435 aa27.54■■■□□ 2
VIM-AS1-202ENST00000605833 NTSR2O95665 410 aa27.53■■■□□ 2
VIM-AS1-202ENST00000605833 HOXA10P31260 410 aaPredicted RBP27.52■■■□□ 2
VIM-AS1-202ENST00000605833 PNMA8AQ86V59 439 aaPredicted RBP27.52■■■□□ 2
VIM-AS1-202ENST00000605833 ZNF34Q8IZ26 560 aa27.52■■■□□ 2
VIM-AS1-202ENST00000605833 ANKRD36CQ5JPF3 1778 aa27.51■■□□□ 1.99
VIM-AS1-202ENST00000605833 PPEF1O14829 653 aaPredicted RBP27.51■■□□□ 1.99
VIM-AS1-202ENST00000605833 CNTROBQ8N137 903 aa27.51■■□□□ 1.99
VIM-AS1-202ENST00000605833 LAMB2P55268 1798 aa27.5■■□□□ 1.99
VIM-AS1-202ENST00000605833 EIF6P56537 245 aaKnown RBP27.5■■□□□ 1.99
VIM-AS1-202ENST00000605833 CC2D2BQ6DHV5 1058 aa27.5■■□□□ 1.99
VIM-AS1-202ENST00000605833 GIGYF2Q6Y7W6 1299 aaKnown RBP27.5■■□□□ 1.99
VIM-AS1-202ENST00000605833 LARGE2Q8N3Y3 721 aa27.5■■□□□ 1.99
VIM-AS1-202ENST00000605833 TSPYL4Q9UJ04 414 aa27.5■■□□□ 1.99
VIM-AS1-202ENST00000605833 RBM17Q96I25 401 aaKnown RBP27.49■■□□□ 1.99
VIM-AS1-202ENST00000605833 ERBB4Q15303 1308 aa27.48■■□□□ 1.99
VIM-AS1-202ENST00000605833 ANXA1P04083 346 aa27.48■■□□□ 1.99
VIM-AS1-202ENST00000605833 CRAMP1Q96RY5 1269 aa27.48■■□□□ 1.99
VIM-AS1-202ENST00000605833 EIF2S2P20042 333 aaKnown RBP27.47■■□□□ 1.99
VIM-AS1-202ENST00000605833 PROSER3Q2NL68 480 aa27.47■■□□□ 1.99
VIM-AS1-202ENST00000605833 LRP10Q7Z4F1 713 aa27.47■■□□□ 1.99
VIM-AS1-202ENST00000605833 LMOD1P29536 600 aaPredicted RBP27.46■■□□□ 1.99
VIM-AS1-202ENST00000605833 SCNN1DP51172 638 aa27.46■■□□□ 1.99
VIM-AS1-202ENST00000605833 PDIA6Q15084 440 aa27.46■■□□□ 1.99
VIM-AS1-202ENST00000605833 AIDAQ96BJ3 306 aa27.46■■□□□ 1.99
VIM-AS1-202ENST00000605833 EPS15P42566 896 aa27.45■■□□□ 1.98
VIM-AS1-202ENST00000605833 FMR1Q06787 632 aaKnown RBP eCLIP27.45■■□□□ 1.98
VIM-AS1-202ENST00000605833 PPP1R42Q7Z4L9 355 aa27.45■■□□□ 1.98
VIM-AS1-202ENST00000605833 RASSF10A6NK89 507 aa27.44■■□□□ 1.98
VIM-AS1-202ENST00000605833 PARP10Q53GL7 1025 aa27.44■■□□□ 1.98
VIM-AS1-202ENST00000605833 PNNQ9H307 717 aaKnown RBP27.44■■□□□ 1.98
VIM-AS1-202ENST00000605833 ABT1Q9ULW3 272 aaKnown RBP27.44■■□□□ 1.98
VIM-AS1-202ENST00000605833 PPIP5K2O43314 1243 aa27.43■■□□□ 1.98
VIM-AS1-202ENST00000605833 AOC3Q16853 763 aa27.43■■□□□ 1.98
VIM-AS1-202ENST00000605833 NIM1KQ8IY84 436 aa27.43■■□□□ 1.98
VIM-AS1-202ENST00000605833 NECTIN2Q92692 538 aa27.43■■□□□ 1.98
VIM-AS1-202ENST00000605833 ABCC4O15439 1325 aa27.42■■□□□ 1.98
VIM-AS1-202ENST00000605833 TRPM7Q96QT4 1865 aa27.42■■□□□ 1.98
VIM-AS1-202ENST00000605833 CTCFP49711 727 aaPredicted RBP27.42■■□□□ 1.98
VIM-AS1-202ENST00000605833 RIPK4P57078 832 aa27.42■■□□□ 1.98
VIM-AS1-202ENST00000605833 DEFB115Q30KQ5 88 aa27.42■■□□□ 1.98
VIM-AS1-202ENST00000605833 GRIPAP1Q4V328 841 aa27.42■■□□□ 1.98
VIM-AS1-202ENST00000605833 NLRP3Q96P20 1036 aa27.42■■□□□ 1.98
VIM-AS1-202ENST00000605833 UTP14AQ9BVJ6 771 aaKnown RBP27.42■■□□□ 1.98
VIM-AS1-202ENST00000605833 DDX21Q9NR30 783 aaKnown RBP eCLIP27.42■■□□□ 1.98
VIM-AS1-202ENST00000605833 TAF1P21675 1872 aa27.41■■□□□ 1.98
VIM-AS1-202ENST00000605833 PRDM10Q9NQV6 1147 aa27.41■■□□□ 1.98
VIM-AS1-202ENST00000605833 WBP1LQ9NX94 342 aa27.41■■□□□ 1.98
VIM-AS1-202ENST00000605833 ATP6V0A2Q9Y487 856 aa27.4■■□□□ 1.98
VIM-AS1-202ENST00000605833 THSD7BQ9C0I4 1608 aa27.4■■□□□ 1.98
VIM-AS1-202ENST00000605833 WDR33Q9C0J8 1336 aaKnown RBP27.4■■□□□ 1.98
VIM-AS1-202ENST00000605833 LBX1P52954 281 aa27.39■■□□□ 1.98
VIM-AS1-202ENST00000605833 AIMP1Q12904 312 aaKnown RBP27.39■■□□□ 1.98
VIM-AS1-202ENST00000605833 TRAF5O00463 557 aa27.38■■□□□ 1.97
VIM-AS1-202ENST00000605833 ZNF428Q96B54 188 aa27.38■■□□□ 1.97
VIM-AS1-202ENST00000605833 HCLS1P14317 486 aaPredicted RBP27.37■■□□□ 1.97
VIM-AS1-202ENST00000605833 SLC10A5Q5PT55 438 aa27.37■■□□□ 1.97
VIM-AS1-202ENST00000605833 XAGE3Q8WTP9 111 aa27.37■■□□□ 1.97
VIM-AS1-202ENST00000605833 TMX4Q9H1E5 349 aaPredicted RBP27.37■■□□□ 1.97
VIM-AS1-202ENST00000605833 TMPOP42166 694 aaKnown RBP27.36■■□□□ 1.97
VIM-AS1-202ENST00000605833 PAXIP1Q6ZW49 1069 aaPredicted RBP27.36■■□□□ 1.97
VIM-AS1-202ENST00000605833 COPS6Q7L5N1 327 aa27.36■■□□□ 1.97
VIM-AS1-202ENST00000605833 KRT24Q2M2I5 525 aa27.35■■□□□ 1.97
VIM-AS1-202ENST00000605833 USP50Q70EL3 339 aaPredicted RBP27.35■■□□□ 1.97
VIM-AS1-202ENST00000605833 NLRP10Q86W26 655 aa27.35■■□□□ 1.97
VIM-AS1-202ENST00000605833 DDX60Q8IY21 1712 aaKnown RBP27.35■■□□□ 1.97
VIM-AS1-202ENST00000605833 HSPA8P11142 646 aaKnown RBP27.34■■□□□ 1.97
VIM-AS1-202ENST00000605833 GRM1Q13255 1194 aa27.34■■□□□ 1.97
VIM-AS1-202ENST00000605833 CCDC146Q8IYE0 955 aa27.34■■□□□ 1.97
VIM-AS1-202ENST00000605833 GPRC5DQ9NZD1 345 aa27.34■■□□□ 1.97
VIM-AS1-202ENST00000605833 CXCL9Q07325 125 aa27.33■■□□□ 1.97
VIM-AS1-202ENST00000605833 DPP8Q6V1X1 898 aaPredicted RBP27.33■■□□□ 1.97
VIM-AS1-202ENST00000605833 BABAM1Q9NWV8 329 aa27.33■■□□□ 1.97
VIM-AS1-202ENST00000605833 ZNRF3Q9ULT6 936 aa27.33■■□□□ 1.97
VIM-AS1-202ENST00000605833 DUOX1Q9NRD9 1551 aa27.33■■□□□ 1.97
VIM-AS1-202ENST00000605833 LMOD3Q0VAK6 560 aa27.32■■□□□ 1.96
VIM-AS1-202ENST00000605833 NEUROD2Q15784 382 aa27.32■■□□□ 1.96
VIM-AS1-202ENST00000605833 HSP90AB3PQ58FF7 597 aa27.32■■□□□ 1.96
VIM-AS1-202ENST00000605833 RTFDC1Q9BY42 306 aaPredicted RBP27.32■■□□□ 1.96
VIM-AS1-202ENST00000605833 ADARB2Q9NS39 739 aaKnown RBP27.32■■□□□ 1.96
VIM-AS1-202ENST00000605833 LRRC37AA6NMS7 1700 aa27.32■■□□□ 1.96
VIM-AS1-202ENST00000605833 GMPSP49915 693 aaPredicted RBP27.31■■□□□ 1.96
VIM-AS1-202ENST00000605833 CST9Q5W186 159 aa27.31■■□□□ 1.96
VIM-AS1-202ENST00000605833 CYP4F22Q6NT55 531 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms