RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 C21orf2O43822 256 aa14.85□□□□□ -0.03
CCDC12-209ENST00000604164 HSP90B1P14625 803 aaKnown RBP14.85□□□□□ -0.03
CCDC12-209ENST00000604164 LMNB1P20700 586 aa14.85□□□□□ -0.03
CCDC12-209ENST00000604164 NLRP10Q86W26 655 aa14.85□□□□□ -0.03
CCDC12-209ENST00000604164 RNF181Q9P0P0 153 aa14.85□□□□□ -0.03
CCDC12-209ENST00000604164 SENP3-EIF4A1A0A087X0R7 540 aa14.84□□□□□ -0.03
CCDC12-209ENST00000604164 GRIPAP1Q4V328 841 aa14.84□□□□□ -0.03
CCDC12-209ENST00000604164 SLC10A5Q5PT55 438 aa14.84□□□□□ -0.03
CCDC12-209ENST00000604164 TSPYL6Q8N831 410 aa14.84□□□□□ -0.03
CCDC12-209ENST00000604164 RBM17Q96I25 401 aaKnown RBP14.84□□□□□ -0.03
CCDC12-209ENST00000604164 TMX4Q9H1E5 349 aaPredicted RBP14.84□□□□□ -0.03
CCDC12-209ENST00000604164 TRMT112Q9UI30 125 aaKnown RBP14.84□□□□□ -0.03
CCDC12-209ENST00000604164 SH3TC1Q8TE82 1336 aa14.84□□□□□ -0.03
CCDC12-209ENST00000604164 FANCIQ9NVI1 1328 aa14.84□□□□□ -0.03
CCDC12-209ENST00000604164 ABCC12Q96J65 1359 aa14.84□□□□□ -0.03
CCDC12-209ENST00000604164 COL11A2P13942 1736 aaPredicted RBP14.83□□□□□ -0.03
CCDC12-209ENST00000604164 HOXA10P31260 410 aaPredicted RBP14.83□□□□□ -0.04
CCDC12-209ENST00000604164 TRIM28Q13263 835 aaKnown RBP14.83□□□□□ -0.04
CCDC12-209ENST00000604164 CCDC93Q567U6 631 aa14.83□□□□□ -0.04
CCDC12-209ENST00000604164 CC2D2BQ6DHV5 1058 aa14.83□□□□□ -0.04
CCDC12-209ENST00000604164 RTKN2Q8IZC4 609 aa14.83□□□□□ -0.04
CCDC12-209ENST00000604164 TAOK3Q9H2K8 898 aa14.83□□□□□ -0.04
CCDC12-209ENST00000604164 LTBP3Q9NS15 1303 aa14.83□□□□□ -0.04
CCDC12-209ENST00000604164 CRAMP1Q96RY5 1269 aa14.82□□□□□ -0.04
CCDC12-209ENST00000604164 ISCA1Q9BUE6 129 aa14.82□□□□□ -0.04
CCDC12-209ENST00000604164 PHAXQ9H814 394 aaKnown RBP14.82□□□□□ -0.04
CCDC12-209ENST00000604164 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
CCDC12-209ENST00000604164 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
CCDC12-209ENST00000604164 ANKRD36CQ5JPF3 1778 aa14.81□□□□□ -0.04
CCDC12-209ENST00000604164 RASSF7Q02833 373 aa14.81□□□□□ -0.04
CCDC12-209ENST00000604164 ZNF526Q8TF50 670 aaPredicted RBP14.81□□□□□ -0.04
CCDC12-209ENST00000604164 ARFGEF2Q9Y6D5 1785 aa14.8□□□□□ -0.04
CCDC12-209ENST00000604164 NFKBIEO00221 500 aa14.8□□□□□ -0.04
CCDC12-209ENST00000604164 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
CCDC12-209ENST00000604164 NEXNQ0ZGT2 675 aa14.8□□□□□ -0.04
CCDC12-209ENST00000604164 CCDC191Q8NCU4 936 aa14.8□□□□□ -0.04
CCDC12-209ENST00000604164 C7orf43Q8WVR3 580 aa14.8□□□□□ -0.04
CCDC12-209ENST00000604164 ATP5J2-PTCD1G3V325 749 aa14.79□□□□□ -0.04
CCDC12-209ENST00000604164 EXOSC9Q06265 439 aaKnown RBP14.79□□□□□ -0.04
CCDC12-209ENST00000604164 KSR2Q6VAB6 950 aa14.79□□□□□ -0.04
CCDC12-209ENST00000604164 METTL22Q9BUU2 404 aaPredicted RBP14.79□□□□□ -0.04
CCDC12-209ENST00000604164 SLX4Q8IY92 1834 aa14.78□□□□□ -0.04
CCDC12-209ENST00000604164 ZNF521Q96K83 1311 aa14.78□□□□□ -0.04
CCDC12-209ENST00000604164 E9PSI1 815 aa14.78□□□□□ -0.04
CCDC12-209ENST00000604164 VAMP4O75379 141 aa14.78□□□□□ -0.04
CCDC12-209ENST00000604164 BBOX1O75936 387 aa14.78□□□□□ -0.04
CCDC12-209ENST00000604164 FKBP4Q02790 459 aaKnown RBP eCLIP14.78□□□□□ -0.04
CCDC12-209ENST00000604164 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
CCDC12-209ENST00000604164 DPY19L2Q6NUT2 758 aa14.78□□□□□ -0.04
CCDC12-209ENST00000604164 DDX46Q7L014 1031 aaKnown RBP14.78□□□□□ -0.04
CCDC12-209ENST00000604164 ZBTB38Q8NAP3 1195 aaPredicted RBP14.78□□□□□ -0.04
CCDC12-209ENST00000604164 MYD88Q99836 296 aa14.78□□□□□ -0.04
CCDC12-209ENST00000604164 CWC25Q9NXE8 425 aaPredicted RBP14.78□□□□□ -0.04
CCDC12-209ENST00000604164 MAP3K2Q9Y2U5 619 aa14.78□□□□□ -0.04
CCDC12-209ENST00000604164 PPEF1O14829 653 aaPredicted RBP14.77□□□□□ -0.05
CCDC12-209ENST00000604164 HCLS1P14317 486 aaPredicted RBP14.77□□□□□ -0.05
CCDC12-209ENST00000604164 C1QTNF8P60827 252 aa14.77□□□□□ -0.05
CCDC12-209ENST00000604164 TMC4Q7Z404 712 aa14.77□□□□□ -0.05
CCDC12-209ENST00000604164 TNRC6CQ9HCJ0 1690 aaKnown RBP14.77□□□□□ -0.05
CCDC12-209ENST00000604164 SBF1O95248 1867 aa14.76□□□□□ -0.05
CCDC12-209ENST00000604164 PI4KAP2A4QPH2 592 aa14.76□□□□□ -0.05
CCDC12-209ENST00000604164 IRS4O14654 1257 aaPredicted RBP14.76□□□□□ -0.05
CCDC12-209ENST00000604164 FLIIQ13045 1269 aa14.76□□□□□ -0.05
CCDC12-209ENST00000604164 PI4KAP1Q8N8J0 262 aa14.76□□□□□ -0.05
CCDC12-209ENST00000604164 FAM89AQ96GI7 184 aa14.76□□□□□ -0.05
CCDC12-209ENST00000604164 PSMD1Q99460 953 aa14.76□□□□□ -0.05
CCDC12-209ENST00000604164 FER1L6Q2WGJ9 1857 aa14.76□□□□□ -0.05
CCDC12-209ENST00000604164 GLTPD2A6NH11 291 aa14.75□□□□□ -0.05
CCDC12-209ENST00000604164 TCERG1O14776 1098 aaKnown RBP14.75□□□□□ -0.05
CCDC12-209ENST00000604164 PCCAP05165 728 aaPredicted RBP14.75□□□□□ -0.05
CCDC12-209ENST00000604164 FKBP5Q13451 457 aaPredicted RBP14.75□□□□□ -0.05
CCDC12-209ENST00000604164 SF3B3Q15393 1217 aaKnown RBP14.75□□□□□ -0.05
CCDC12-209ENST00000604164 C16orf71Q8IYS4 520 aaPredicted RBP14.75□□□□□ -0.05
CCDC12-209ENST00000604164 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
CCDC12-209ENST00000604164 ATP6V0A2Q9Y487 856 aa14.75□□□□□ -0.05
CCDC12-209ENST00000604164 CACNA1SQ13698 1873 aa14.74□□□□□ -0.05
CCDC12-209ENST00000604164 GRAPQ13588 217 aa14.74□□□□□ -0.05
CCDC12-209ENST00000604164 C3orf67Q6ZVT6 689 aa14.74□□□□□ -0.05
CCDC12-209ENST00000604164 SYNE4Q8N205 404 aa14.74□□□□□ -0.05
CCDC12-209ENST00000604164 SUPT20HQ8NEM7 779 aa14.74□□□□□ -0.05
CCDC12-209ENST00000604164 GRAPLQ8TC17 118 aaPredicted RBP14.74□□□□□ -0.05
CCDC12-209ENST00000604164 ZNF428Q96B54 188 aa14.74□□□□□ -0.05
CCDC12-209ENST00000604164 VPS33BQ9H267 617 aa14.74□□□□□ -0.05
CCDC12-209ENST00000604164 CACNA1FO60840 1977 aa14.74□□□□□ -0.05
CCDC12-209ENST00000604164 ABCC4O15439 1325 aa14.73□□□□□ -0.05
CCDC12-209ENST00000604164 PDE8AO60658 829 aa14.73□□□□□ -0.05
CCDC12-209ENST00000604164 SP8Q8IXZ3 490 aa14.73□□□□□ -0.05
CCDC12-209ENST00000604164 JDP2Q8WYK2 163 aa14.73□□□□□ -0.05
CCDC12-209ENST00000604164 CDHR2Q9BYE9 1310 aa14.72□□□□□ -0.05
CCDC12-209ENST00000604164 KIF3CO14782 793 aa14.72□□□□□ -0.05
CCDC12-209ENST00000604164 IARSP41252 1262 aaKnown RBP14.72□□□□□ -0.05
CCDC12-209ENST00000604164 PRELPP51888 382 aa14.72□□□□□ -0.05
CCDC12-209ENST00000604164 CCDC152Q4G0S7 254 aa14.72□□□□□ -0.05
CCDC12-209ENST00000604164 RTL5Q5HYW3 569 aaPredicted RBP14.72□□□□□ -0.05
CCDC12-209ENST00000604164 DNAAF4Q8WXU2 420 aa14.72□□□□□ -0.05
CCDC12-209ENST00000604164 ZNF277Q9NRM2 450 aaPredicted RBP14.72□□□□□ -0.05
CCDC12-209ENST00000604164 NEURL1BA8MQ27 555 aa14.71□□□□□ -0.05
CCDC12-209ENST00000604164 TOMM70O94826 608 aa14.71□□□□□ -0.05
CCDC12-209ENST00000604164 VEGFAP15692 232 aaPredicted RBP14.71□□□□□ -0.05
CCDC12-209ENST00000604164 SLFN5Q08AF3 891 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms