RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 SUSD3Q96L08 255 aa3.43□□□□□ -1.86
CEP290-208ENST00000604024 SLC30A3Q99726 388 aa3.43□□□□□ -1.86
CEP290-208ENST00000604024 RNF112Q9ULX5 631 aa3.43□□□□□ -1.86
CEP290-208ENST00000604024 SLC6A14Q9UN76 642 aa3.43□□□□□ -1.86
CEP290-208ENST00000604024 HOXD8P13378 290 aaPredicted RBP3.42□□□□□ -1.86
CEP290-208ENST00000604024 EPB42P16452 691 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 MCM6Q14566 821 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 RBM19Q9Y4C8 960 aaKnown RBP3.42□□□□□ -1.86
CEP290-208ENST00000604024 USP3Q9Y6I4 520 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 USP17L5A8MUK1 530 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 CCINQ13939 588 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 MBTPS1Q14703 1052 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 TRAPPC3LQ5T215 181 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 GDPD2Q9HCC8 539 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.42□□□□□ -1.86
CEP290-208ENST00000604024 COG6Q9Y2V7 657 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 ATP9BO43861 1147 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 ALBP02768 609 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 TYRO3Q06418 890 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 NBPF11Q86T75 865 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 CEP63Q96MT8 703 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 PHACTR1Q9C0D0 580 aa3.42□□□□□ -1.86
CEP290-208ENST00000604024 IGFBP4P22692 258 aa3.41□□□□□ -1.86
CEP290-208ENST00000604024 RTN1Q16799 776 aa3.41□□□□□ -1.86
CEP290-208ENST00000604024 BRD7Q9NPI1 651 aa3.41□□□□□ -1.86
CEP290-208ENST00000604024 ZNF232Q9UNY5 417 aa3.41□□□□□ -1.86
CEP290-208ENST00000604024 SCO2A0A1W2PP80 73 aa3.41□□□□□ -1.86
CEP290-208ENST00000604024 GSC2O15499 205 aa3.41□□□□□ -1.86
CEP290-208ENST00000604024 HYAL3O43820 417 aaPredicted RBP3.41□□□□□ -1.86
CEP290-208ENST00000604024 RAD21O60216 631 aa3.41□□□□□ -1.86
CEP290-208ENST00000604024 STAU1O95793 577 aaKnown RBP3.41□□□□□ -1.86
CEP290-208ENST00000604024 PRSS36Q5K4E3 855 aa3.41□□□□□ -1.86
CEP290-208ENST00000604024 GSX2Q9BZM3 304 aa3.41□□□□□ -1.86
CEP290-208ENST00000604024 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.41□□□□□ -1.86
CEP290-208ENST00000604024 SFI1A8K8P3 1242 aa3.4□□□□□ -1.86
CEP290-208ENST00000604024 TGFBR3LH3BV60 316 aa3.4□□□□□ -1.86
CEP290-208ENST00000604024 TXKP42681 527 aa3.4□□□□□ -1.86
CEP290-208ENST00000604024 FOXD4L6Q3SYB3 417 aaPredicted RBP3.4□□□□□ -1.86
CEP290-208ENST00000604024 CCDC102BQ68D86 513 aa3.4□□□□□ -1.86
CEP290-208ENST00000604024 FOXD4L3Q6VB84 417 aaPredicted RBP3.4□□□□□ -1.86
CEP290-208ENST00000604024 FMR1NBQ8N0W7 255 aaPredicted RBP3.4□□□□□ -1.86
CEP290-208ENST00000604024 MUC3BQ9H195 1237 aa3.4□□□□□ -1.86
CEP290-208ENST00000604024 ATAD2Q6PL18 1390 aa3.4□□□□□ -1.87
CEP290-208ENST00000604024 EGFRP00533 1210 aa3.4□□□□□ -1.87
CEP290-208ENST00000604024 PSME1Q06323 249 aa3.4□□□□□ -1.87
CEP290-208ENST00000604024 TNS4Q8IZW8 715 aa3.4□□□□□ -1.87
CEP290-208ENST00000604024 UBE2OQ9C0C9 1292 aaKnown RBP3.4□□□□□ -1.87
CEP290-208ENST00000604024 PPP1R12BO60237 982 aaPredicted RBP3.39□□□□□ -1.87
CEP290-208ENST00000604024 DKK1O94907 266 aa3.39□□□□□ -1.87
CEP290-208ENST00000604024 SELPP16109 830 aa3.39□□□□□ -1.87
CEP290-208ENST00000604024 NCOA4Q13772 614 aa3.39□□□□□ -1.87
CEP290-208ENST00000604024 IGF2-ASQ6U949 168 aa3.39□□□□□ -1.87
CEP290-208ENST00000604024 BTLAQ7Z6A9 289 aa3.39□□□□□ -1.87
CEP290-208ENST00000604024 TMEM130Q8N3G9 435 aa3.39□□□□□ -1.87
CEP290-208ENST00000604024 C2orf49Q9BVC5 232 aaPredicted RBP3.39□□□□□ -1.87
CEP290-208ENST00000604024 RGS9O75916 674 aaPredicted RBP3.39□□□□□ -1.87
CEP290-208ENST00000604024 TRPM4Q8TD43 1214 aa3.39□□□□□ -1.87
CEP290-208ENST00000604024 MYO19Q96H55 970 aa3.39□□□□□ -1.87
CEP290-208ENST00000604024 DNAJB12Q9NXW2 375 aaKnown RBP3.39□□□□□ -1.87
CEP290-208ENST00000604024 DMGDHQ9UI17 866 aaKnown RBP3.39□□□□□ -1.87
CEP290-208ENST00000604024 PIK3CDO00329 1044 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 FOXO3O43524 673 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 NRLP54845 237 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 SEC13P55735 322 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 MSL1Q68DK7 614 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 USP17L3A6NCW0 530 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 USP17L4A6NCW7 530 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 AFF1P51825 1210 aaKnown RBP3.38□□□□□ -1.87
CEP290-208ENST00000604024 USP17L2Q6R6M4 530 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 Q6ZS46 218 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 USP17L1Q7RTZ2 530 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 ALDH16A1Q8IZ83 802 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 WFDC12Q8WWY7 111 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 PARP3Q9Y6F1 533 aa3.38□□□□□ -1.87
CEP290-208ENST00000604024 COL17A1Q9UMD9 1497 aaPredicted RBP3.38□□□□□ -1.87
CEP290-208ENST00000604024 ARSDP51689 593 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 GPLD1P80108 840 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 GRIK5Q16478 980 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 LARP1Q6PKG0 1096 aaKnown RBP3.37□□□□□ -1.87
CEP290-208ENST00000604024 BHMTQ93088 406 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 FMNL2Q96PY5 1086 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 HCN4Q9Y3Q4 1203 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 PAX4O43316 350 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 WFDC8Q8IUA0 241 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 TPCN2Q8NHX9 752 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 TP53INP1Q96A56 240 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 PNMA5Q96PV4 448 aa3.37□□□□□ -1.87
CEP290-208ENST00000604024 MRPL18Q9H0U6 180 aaKnown RBP3.37□□□□□ -1.87
CEP290-208ENST00000604024 OGFOD1Q8N543 542 aa3.36□□□□□ -1.87
CEP290-208ENST00000604024 MKRN1Q9UHC7 482 aaKnown RBP3.36□□□□□ -1.87
CEP290-208ENST00000604024 SLC24A1O60721 1099 aa3.36□□□□□ -1.87
CEP290-208ENST00000604024 C11orf91Q3C1V1 193 aa3.36□□□□□ -1.87
CEP290-208ENST00000604024 TSPAN10Q9H1Z9 355 aaPredicted RBP3.36□□□□□ -1.87
CEP290-208ENST00000604024 JPH1Q9HDC5 661 aaPredicted RBP3.36□□□□□ -1.87
CEP290-208ENST00000604024 FAM13BQ9NYF5 915 aa3.36□□□□□ -1.87
CEP290-208ENST00000604024 DLL1O00548 723 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 INPP5BP32019 993 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 PSAPL1Q6NUJ1 521 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 INTS5Q6P9B9 1019 aaKnown RBP3.35□□□□□ -1.87
CEP290-208ENST00000604024 PRR23CQ6ZRP0 262 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms