RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 KLRG2A4D1S0 409 aaPredicted RBP17.66■□□□□ 0.42
RNF40-212ENST00000602784 IGKV5-2P06315 115 aa17.66■□□□□ 0.42
RNF40-212ENST00000602784 LINS1Q8NG48 757 aa17.66■□□□□ 0.42
RNF40-212ENST00000602784 CWC25Q9NXE8 425 aaPredicted RBP17.66■□□□□ 0.42
RNF40-212ENST00000602784 TRMT112Q9UI30 125 aaKnown RBP17.66■□□□□ 0.42
RNF40-212ENST00000602784 PXDNLA1KZ92 1463 aa17.66■□□□□ 0.42
RNF40-212ENST00000602784 ERFEQ4G0M1 354 aa17.65■□□□□ 0.42
RNF40-212ENST00000602784 NUTM1Q86Y26 1132 aa17.65■□□□□ 0.42
RNF40-212ENST00000602784 ARHGAP45Q92619 1136 aa17.65■□□□□ 0.42
RNF40-212ENST00000602784 SH3TC1Q8TE82 1336 aa17.65■□□□□ 0.42
RNF40-212ENST00000602784 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
RNF40-212ENST00000602784 KIAA1551Q9HCM1 1747 aa17.64■□□□□ 0.41
RNF40-212ENST00000602784 A0A0G2JLW4 131 aa17.64■□□□□ 0.41
RNF40-212ENST00000602784 NEURL1BA8MQ27 555 aa17.64■□□□□ 0.41
RNF40-212ENST00000602784 F6X3S4 739 aa17.64■□□□□ 0.41
RNF40-212ENST00000602784 H0YIN7 160 aa17.64■□□□□ 0.41
RNF40-212ENST00000602784 DPEP1P16444 411 aa17.64■□□□□ 0.41
RNF40-212ENST00000602784 KCNA3P22001 575 aa17.64■□□□□ 0.41
RNF40-212ENST00000602784 CCDC24Q8N4L8 307 aa17.64■□□□□ 0.41
RNF40-212ENST00000602784 ZBTB38Q8NAP3 1195 aaPredicted RBP17.64■□□□□ 0.41
RNF40-212ENST00000602784 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.41
RNF40-212ENST00000602784 ANKRD31Q8N7Z5 1873 aa17.64■□□□□ 0.41
RNF40-212ENST00000602784 IPO8O15397 1037 aaKnown RBP17.63■□□□□ 0.41
RNF40-212ENST00000602784 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
RNF40-212ENST00000602784 BEND3Q5T5X7 828 aa17.63■□□□□ 0.41
RNF40-212ENST00000602784 C2CD5Q86YS7 1000 aa17.63■□□□□ 0.41
RNF40-212ENST00000602784 NOB1Q9ULX3 412 aaKnown RBP17.63■□□□□ 0.41
RNF40-212ENST00000602784 ABCC12Q96J65 1359 aa17.63■□□□□ 0.41
RNF40-212ENST00000602784 PCCAP05165 728 aaPredicted RBP17.62■□□□□ 0.41
RNF40-212ENST00000602784 SRGNP10124 158 aa17.62■□□□□ 0.41
RNF40-212ENST00000602784 CHRNA5P30532 468 aa17.62■□□□□ 0.41
RNF40-212ENST00000602784 GCKRQ14397 625 aa17.62■□□□□ 0.41
RNF40-212ENST00000602784 CWF19L2Q2TBE0 894 aaKnown RBP17.62■□□□□ 0.41
RNF40-212ENST00000602784 CRY2Q49AN0 593 aa17.62■□□□□ 0.41
RNF40-212ENST00000602784 API5Q9BZZ5 524 aaKnown RBP17.62■□□□□ 0.41
RNF40-212ENST00000602784 PIM2Q9P1W9 311 aa17.62■□□□□ 0.41
RNF40-212ENST00000602784 BCAR3O75815 825 aa17.61■□□□□ 0.41
RNF40-212ENST00000602784 ALDH1L1O75891 902 aa17.61■□□□□ 0.41
RNF40-212ENST00000602784 FAM89AQ96GI7 184 aa17.61■□□□□ 0.41
RNF40-212ENST00000602784 NLRP3Q96P20 1036 aa17.61■□□□□ 0.41
RNF40-212ENST00000602784 N4BP2Q86UW6 1770 aaPredicted RBP17.61■□□□□ 0.41
RNF40-212ENST00000602784 H7C1W4 665 aa17.6■□□□□ 0.41
RNF40-212ENST00000602784 STYK1Q6J9G0 422 aa17.6■□□□□ 0.41
RNF40-212ENST00000602784 SYNE4Q8N205 404 aa17.6■□□□□ 0.41
RNF40-212ENST00000602784 SRCIN1Q9C0H9 1055 aa17.6■□□□□ 0.41
RNF40-212ENST00000602784 CDHR2Q9BYE9 1310 aa17.59■□□□□ 0.41
RNF40-212ENST00000602784 NPR1P16066 1061 aa17.59■□□□□ 0.41
RNF40-212ENST00000602784 HOXA10P31260 410 aaPredicted RBP17.59■□□□□ 0.41
RNF40-212ENST00000602784 SLC4A10Q6U841 1118 aa17.59■□□□□ 0.41
RNF40-212ENST00000602784 MASTLQ96GX5 879 aa17.59■□□□□ 0.41
RNF40-212ENST00000602784 DLEC1Q9Y238 1755 aa17.58■□□□□ 0.41
RNF40-212ENST00000602784 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
RNF40-212ENST00000602784 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.4
RNF40-212ENST00000602784 HCLS1P14317 486 aaPredicted RBP17.58■□□□□ 0.4
RNF40-212ENST00000602784 DALRD3Q5D0E6 543 aaKnown RBP17.58■□□□□ 0.4
RNF40-212ENST00000602784 TTLL6Q8N841 843 aa17.58■□□□□ 0.4
RNF40-212ENST00000602784 CNKSR1Q969H4 720 aa17.58■□□□□ 0.4
RNF40-212ENST00000602784 RCAN3Q9UKA8 241 aa17.58■□□□□ 0.4
RNF40-212ENST00000602784 BRCA1P38398 1863 aaKnown RBP17.58■□□□□ 0.4
RNF40-212ENST00000602784 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
RNF40-212ENST00000602784 ATF7IPQ6VMQ6 1270 aa17.57■□□□□ 0.4
RNF40-212ENST00000602784 ZNF622Q969S3 477 aaKnown RBP eCLIP17.57■□□□□ 0.4
RNF40-212ENST00000602784 COL11A2P13942 1736 aaPredicted RBP17.56■□□□□ 0.4
RNF40-212ENST00000602784 TNRC6CQ9HCJ0 1690 aaKnown RBP17.56■□□□□ 0.4
RNF40-212ENST00000602784 ALDH1B1P30837 517 aa17.56■□□□□ 0.4
RNF40-212ENST00000602784 SF3B3Q15393 1217 aaKnown RBP17.56■□□□□ 0.4
RNF40-212ENST00000602784 GPR162Q16538 588 aa17.56■□□□□ 0.4
RNF40-212ENST00000602784 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
RNF40-212ENST00000602784 ZKSCAN2Q63HK3 967 aa17.56■□□□□ 0.4
RNF40-212ENST00000602784 UBE3BQ7Z3V4 1068 aa17.56■□□□□ 0.4
RNF40-212ENST00000602784 CRAMP1Q96RY5 1269 aa17.56■□□□□ 0.4
RNF40-212ENST00000602784 GRM8O00222 908 aa17.55■□□□□ 0.4
RNF40-212ENST00000602784 GRIN3BO60391 1043 aa17.55■□□□□ 0.4
RNF40-212ENST00000602784 PDE8AO60658 829 aa17.55■□□□□ 0.4
RNF40-212ENST00000602784 TRIM27P14373 513 aa17.55■□□□□ 0.4
RNF40-212ENST00000602784 CASP7P55210 303 aa17.55■□□□□ 0.4
RNF40-212ENST00000602784 C3orf67Q6ZVT6 689 aa17.55■□□□□ 0.4
RNF40-212ENST00000602784 RPGRQ92834 1020 aaKnown RBP17.55■□□□□ 0.4
RNF40-212ENST00000602784 FRAT1Q92837 279 aaPredicted RBP17.55■□□□□ 0.4
RNF40-212ENST00000602784 PLA2G12BQ9BX93 195 aa17.55■□□□□ 0.4
RNF40-212ENST00000602784 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
RNF40-212ENST00000602784 UTYO14607 1347 aa17.54■□□□□ 0.4
RNF40-212ENST00000602784 ABCC4O15439 1325 aa17.54■□□□□ 0.4
RNF40-212ENST00000602784 LAMB2P55268 1798 aa17.54■□□□□ 0.4
RNF40-212ENST00000602784 YBX3P16989 372 aaKnown RBP eCLIP17.54■□□□□ 0.41e-7■□□□□ 11.3
RNF40-212ENST00000602784 INTS3Q68E01 1043 aaKnown RBP17.54■□□□□ 0.4
RNF40-212ENST00000602784 RBM17Q96I25 401 aaKnown RBP17.54■□□□□ 0.4
RNF40-212ENST00000602784 C9orf78Q9NZ63 289 aaPredicted RBP17.54■□□□□ 0.4
RNF40-212ENST00000602784 BCS1LQ9Y276 419 aa17.54■□□□□ 0.4
RNF40-212ENST00000602784 JARID2Q92833 1246 aaPredicted RBP17.53■□□□□ 0.4
RNF40-212ENST00000602784 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.4
RNF40-212ENST00000602784 DDX46Q7L014 1031 aaKnown RBP17.52■□□□□ 0.4
RNF40-212ENST00000602784 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
RNF40-212ENST00000602784 USP44Q9H0E7 712 aa17.52■□□□□ 0.4
RNF40-212ENST00000602784 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
RNF40-212ENST00000602784 CTSWP56202 376 aa17.51■□□□□ 0.39
RNF40-212ENST00000602784 CCDC152Q4G0S7 254 aa17.51■□□□□ 0.39
RNF40-212ENST00000602784 BBOX1O75936 387 aa17.5■□□□□ 0.39
RNF40-212ENST00000602784 NBPF7P0C2Y1 421 aaPredicted RBP17.5■□□□□ 0.39
RNF40-212ENST00000602784 MS4A1P11836 297 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms