RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 NBPF7P0C2Y1 421 aaPredicted RBP20.3■□□□□ 0.84
LTBP4-229ENST00000601032 SDSP20132 328 aa20.29■□□□□ 0.84
LTBP4-229ENST00000601032 HOMEZQ8IX15 550 aa20.29■□□□□ 0.84
LTBP4-229ENST00000601032 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
LTBP4-229ENST00000601032 SRCIN1Q9C0H9 1055 aa20.29■□□□□ 0.84
LTBP4-229ENST00000601032 CYP27B1O15528 508 aa20.29■□□□□ 0.84
LTBP4-229ENST00000601032 SLFN14P0C7P3 912 aa20.29■□□□□ 0.84
LTBP4-229ENST00000601032 UBTFL1P0CB47 393 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-229ENST00000601032 NFATC2IPQ8NCF5 419 aa20.28■□□□□ 0.84
LTBP4-229ENST00000601032 BCL2L12Q9HB09 334 aa20.28■□□□□ 0.84
LTBP4-229ENST00000601032 SALL3Q9BXA9 1300 aa20.28■□□□□ 0.84
LTBP4-229ENST00000601032 PDIA6Q15084 440 aa20.27■□□□□ 0.84
LTBP4-229ENST00000601032 SLC52A2Q9HAB3 445 aa20.27■□□□□ 0.84
LTBP4-229ENST00000601032 PKD1L3Q7Z443 1732 aa20.26■□□□□ 0.83
LTBP4-229ENST00000601032 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.26■□□□□ 0.83
LTBP4-229ENST00000601032 SYCP1Q15431 976 aa20.26■□□□□ 0.83
LTBP4-229ENST00000601032 DBF4Q9UBU7 674 aaPredicted RBP20.26■□□□□ 0.83
LTBP4-229ENST00000601032 DDX49Q9Y6V7 483 aaKnown RBP20.26■□□□□ 0.83
LTBP4-229ENST00000601032 TUBGCP6Q96RT7 1819 aa20.26■□□□□ 0.83
LTBP4-229ENST00000601032 PDE1AP54750 535 aa20.26■□□□□ 0.83
LTBP4-229ENST00000601032 RBM42Q9BTD8 480 aaKnown RBP20.26■□□□□ 0.83
LTBP4-229ENST00000601032 CARD10Q9BWT7 1032 aa20.26■□□□□ 0.83
LTBP4-229ENST00000601032 MAP3K2Q9Y2U5 619 aa20.26■□□□□ 0.83
LTBP4-229ENST00000601032 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
LTBP4-229ENST00000601032 SPDYE4A6NLX3 237 aa20.25■□□□□ 0.83
LTBP4-229ENST00000601032 ZNF790Q6PG37 636 aa20.25■□□□□ 0.83
LTBP4-229ENST00000601032 PPP1R42Q7Z4L9 355 aa20.25■□□□□ 0.83
LTBP4-229ENST00000601032 PIBF1Q8WXW3 757 aa20.25■□□□□ 0.83
LTBP4-229ENST00000601032 RBSNQ9H1K0 784 aa20.25■□□□□ 0.83
LTBP4-229ENST00000601032 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
LTBP4-229ENST00000601032 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
LTBP4-229ENST00000601032 SSH3Q8TE77 659 aa20.24■□□□□ 0.83
LTBP4-229ENST00000601032 SPATA31A1Q5TZJ5 1347 aa20.24■□□□□ 0.83
LTBP4-229ENST00000601032 CD2BP2O95400 341 aaKnown RBP20.24■□□□□ 0.83
LTBP4-229ENST00000601032 LRRCC1Q9C099 1032 aa20.24■□□□□ 0.83
LTBP4-229ENST00000601032 DIAPH3Q9NSV4 1193 aa20.24■□□□□ 0.83
LTBP4-229ENST00000601032 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
LTBP4-229ENST00000601032 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
LTBP4-229ENST00000601032 CAPN2P17655 700 aa20.23■□□□□ 0.83
LTBP4-229ENST00000601032 POLA2Q14181 598 aa20.23■□□□□ 0.83
LTBP4-229ENST00000601032 VPS72Q15906 364 aa20.23■□□□□ 0.83
LTBP4-229ENST00000601032 IFNL2Q8IZJ0 200 aa20.23■□□□□ 0.83
LTBP4-229ENST00000601032 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
LTBP4-229ENST00000601032 CWF19L2Q2TBE0 894 aaKnown RBP20.22■□□□□ 0.83
LTBP4-229ENST00000601032 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
LTBP4-229ENST00000601032 OSBPL3Q9H4L5 887 aa20.22■□□□□ 0.83
LTBP4-229ENST00000601032 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.22■□□□□ 0.83
LTBP4-229ENST00000601032 TRIM6-TRIM34B2RNG4 842 aa20.22■□□□□ 0.83
LTBP4-229ENST00000601032 PIP4K2AP48426 406 aaPredicted RBP20.22■□□□□ 0.83
LTBP4-229ENST00000601032 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
LTBP4-229ENST00000601032 TRIM34Q9BYJ4 488 aa20.22■□□□□ 0.83
LTBP4-229ENST00000601032 IL1RAPL2Q9NP60 686 aa20.22■□□□□ 0.83
LTBP4-229ENST00000601032 ATRNO75882 1429 aa20.21■□□□□ 0.83
LTBP4-229ENST00000601032 ZSCAN23Q3MJ62 389 aa20.21■□□□□ 0.83
LTBP4-229ENST00000601032 KSR2Q6VAB6 950 aa20.21■□□□□ 0.83
LTBP4-229ENST00000601032 SPTLC3Q9NUV7 552 aa20.21■□□□□ 0.83
LTBP4-229ENST00000601032 MRC1P22897 1456 aa20.21■□□□□ 0.83
LTBP4-229ENST00000601032 CTIFO43310 598 aaKnown RBP20.2■□□□□ 0.83
LTBP4-229ENST00000601032 APPP05067 770 aa20.2■□□□□ 0.83
LTBP4-229ENST00000601032 QTRT2Q9H974 415 aaKnown RBP20.2■□□□□ 0.83
LTBP4-229ENST00000601032 GLI3P10071 1580 aa20.2■□□□□ 0.82
LTBP4-229ENST00000601032 U2AF2P26368 475 aaKnown RBP eCLIP20.2■□□□□ 0.82
LTBP4-229ENST00000601032 TERF2Q15554 542 aa20.2■□□□□ 0.82
LTBP4-229ENST00000601032 CTR9Q6PD62 1173 aa20.2■□□□□ 0.82
LTBP4-229ENST00000601032 DDX21Q9NR30 783 aaKnown RBP eCLIP20.2■□□□□ 0.82
LTBP4-229ENST00000601032 SRGAP3O43295 1099 aa20.19■□□□□ 0.82
LTBP4-229ENST00000601032 MYL6BP14649 208 aa20.19■□□□□ 0.82
LTBP4-229ENST00000601032 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
LTBP4-229ENST00000601032 TRPC5Q9UL62 973 aaPredicted RBP20.19■□□□□ 0.82
LTBP4-229ENST00000601032 NOLC1Q14978 699 aaKnown RBP eCLIP20.19■□□□□ 0.82
LTBP4-229ENST00000601032 USP26Q9BXU7 913 aa20.19■□□□□ 0.82
LTBP4-229ENST00000601032 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
LTBP4-229ENST00000601032 MORC2Q9Y6X9 1032 aaPredicted RBP20.19■□□□□ 0.82
LTBP4-229ENST00000601032 SURF6O75683 361 aaKnown RBP20.18■□□□□ 0.82
LTBP4-229ENST00000601032 FAM98CQ17RN3 349 aaKnown RBP20.18■□□□□ 0.82
LTBP4-229ENST00000601032 NUTM1Q86Y26 1132 aa20.18■□□□□ 0.82
LTBP4-229ENST00000601032 DCAF5Q96JK2 942 aa20.18■□□□□ 0.82
LTBP4-229ENST00000601032 GJD4Q96KN9 370 aaPredicted RBP20.18■□□□□ 0.82
LTBP4-229ENST00000601032 HYPKQ9NX55 129 aa20.18■□□□□ 0.82
LTBP4-229ENST00000601032 EP400Q96L91 3159 aa20.18■□□□□ 0.82
LTBP4-229ENST00000601032 WNK3Q9BYP7 1800 aa20.18■□□□□ 0.82
LTBP4-229ENST00000601032 PTMAP06454 111 aaKnown RBP20.17■□□□□ 0.82
LTBP4-229ENST00000601032 MX1P20591 662 aa20.17■□□□□ 0.82
LTBP4-229ENST00000601032 IL2RBP14784 551 aa20.17■□□□□ 0.82
LTBP4-229ENST00000601032 LRP10Q7Z4F1 713 aa20.17■□□□□ 0.82
LTBP4-229ENST00000601032 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.17■□□□□ 0.82
LTBP4-229ENST00000601032 DISP2A7MBM2 1401 aa20.16■□□□□ 0.82
LTBP4-229ENST00000601032 IGSF3O75054 1194 aa20.16■□□□□ 0.82
LTBP4-229ENST00000601032 ZNF772Q68DY9 489 aaPredicted RBP20.16■□□□□ 0.82
LTBP4-229ENST00000601032 KAZALD1Q96I82 304 aa20.16■□□□□ 0.82
LTBP4-229ENST00000601032 DDX41Q9UJV9 622 aaKnown RBP20.16■□□□□ 0.82
LTBP4-229ENST00000601032 BAG4O95429 457 aaKnown RBP20.15■□□□□ 0.82
LTBP4-229ENST00000601032 IGKV5-2P06315 115 aa20.15■□□□□ 0.82
LTBP4-229ENST00000601032 XAGE3Q8WTP9 111 aa20.15■□□□□ 0.82
LTBP4-229ENST00000601032 STAP2Q9UGK3 403 aa20.15■□□□□ 0.82
LTBP4-229ENST00000601032 CHAF1AQ13111 956 aaPredicted RBP20.15■□□□□ 0.82
LTBP4-229ENST00000601032 LRSAM1Q6UWE0 723 aa20.15■□□□□ 0.82
LTBP4-229ENST00000601032 CERS3Q8IU89 383 aa20.15■□□□□ 0.82
LTBP4-229ENST00000601032 TSC1Q92574 1164 aa20.15■□□□□ 0.82
LTBP4-229ENST00000601032 ALDH1L1O75891 902 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms