RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 G2E3Q7L622 706 aa16.55■□□□□ 0.24
SRRM1-223ENST00000600523 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
SRRM1-223ENST00000600523 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
SRRM1-223ENST00000600523 DNAAF4Q8WXU2 420 aa16.55■□□□□ 0.24
SRRM1-223ENST00000600523 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.243e-17■■■□□ 14.9
SRRM1-223ENST00000600523 ISCA1Q9BUE6 129 aa16.55■□□□□ 0.24
SRRM1-223ENST00000600523 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
SRRM1-223ENST00000600523 BCS1LQ9Y276 419 aa16.55■□□□□ 0.24
SRRM1-223ENST00000600523 PTPRCP08575 1304 aa16.54■□□□□ 0.24
SRRM1-223ENST00000600523 NTSR2O95665 410 aa16.54■□□□□ 0.24
SRRM1-223ENST00000600523 CHRNA5P30532 468 aa16.54■□□□□ 0.24
SRRM1-223ENST00000600523 RPGRQ92834 1020 aaKnown RBP16.54■□□□□ 0.24
SRRM1-223ENST00000600523 CNKSR1Q969H4 720 aa16.54■□□□□ 0.24
SRRM1-223ENST00000600523 NLRP3Q96P20 1036 aa16.54■□□□□ 0.24
SRRM1-223ENST00000600523 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
SRRM1-223ENST00000600523 NPR1P16066 1061 aa16.53■□□□□ 0.24
SRRM1-223ENST00000600523 TTLL6Q8N841 843 aa16.53■□□□□ 0.24
SRRM1-223ENST00000600523 SSH1Q8WYL5 1049 aa16.53■□□□□ 0.24
SRRM1-223ENST00000600523 MASTLQ96GX5 879 aa16.53■□□□□ 0.24
SRRM1-223ENST00000600523 ARFGEF2Q9Y6D5 1785 aa16.53■□□□□ 0.24
SRRM1-223ENST00000600523 ALDH1B1P30837 517 aa16.52■□□□□ 0.24
SRRM1-223ENST00000600523 STYK1Q6J9G0 422 aa16.52■□□□□ 0.24
SRRM1-223ENST00000600523 MRPL50Q8N5N7 158 aaKnown RBP16.52■□□□□ 0.24
SRRM1-223ENST00000600523 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.24
SRRM1-223ENST00000600523 RIC1Q4ADV7 1423 aa16.52■□□□□ 0.23
SRRM1-223ENST00000600523 ADCY9O60503 1353 aa16.51■□□□□ 0.23
SRRM1-223ENST00000600523 SLC10A5Q5PT55 438 aa16.51■□□□□ 0.23
SRRM1-223ENST00000600523 SLC4A10Q6U841 1118 aa16.51■□□□□ 0.23
SRRM1-223ENST00000600523 ZBTB38Q8NAP3 1195 aaPredicted RBP16.51■□□□□ 0.23
SRRM1-223ENST00000600523 LINS1Q8NG48 757 aa16.51■□□□□ 0.23
SRRM1-223ENST00000600523 BCL2L13Q9BXK5 485 aa16.51■□□□□ 0.23
SRRM1-223ENST00000600523 TMX4Q9H1E5 349 aaPredicted RBP16.51■□□□□ 0.23
SRRM1-223ENST00000600523 KIF16BQ96L93 1317 aa16.5■□□□□ 0.23
SRRM1-223ENST00000600523 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
SRRM1-223ENST00000600523 SRGNP10124 158 aa16.5■□□□□ 0.23
SRRM1-223ENST00000600523 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
SRRM1-223ENST00000600523 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
SRRM1-223ENST00000600523 KLRG2A4D1S0 409 aaPredicted RBP16.49■□□□□ 0.23
SRRM1-223ENST00000600523 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
SRRM1-223ENST00000600523 KCNA3P22001 575 aa16.49■□□□□ 0.23
SRRM1-223ENST00000600523 SOGA3Q5TF21 947 aa16.49■□□□□ 0.23
SRRM1-223ENST00000600523 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
SRRM1-223ENST00000600523 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
SRRM1-223ENST00000600523 NEURL1BA8MQ27 555 aa16.48■□□□□ 0.23
SRRM1-223ENST00000600523 F6X3S4 739 aa16.48■□□□□ 0.23
SRRM1-223ENST00000600523 IRS4O14654 1257 aaPredicted RBP16.48■□□□□ 0.23
SRRM1-223ENST00000600523 HCLS1P14317 486 aaPredicted RBP16.48■□□□□ 0.23
SRRM1-223ENST00000600523 YBX3P16989 372 aaKnown RBP eCLIP16.48■□□□□ 0.23
SRRM1-223ENST00000600523 RARSP54136 660 aaKnown RBP16.48■□□□□ 0.23
SRRM1-223ENST00000600523 CWF19L2Q2TBE0 894 aaKnown RBP16.48■□□□□ 0.23
SRRM1-223ENST00000600523 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
SRRM1-223ENST00000600523 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
SRRM1-223ENST00000600523 SRCIN1Q9C0H9 1055 aa16.48■□□□□ 0.23
SRRM1-223ENST00000600523 CRY2Q49AN0 593 aa16.47■□□□□ 0.23
SRRM1-223ENST00000600523 DDX46Q7L014 1031 aaKnown RBP16.47■□□□□ 0.23
SRRM1-223ENST00000600523 YTHDC1Q96MU7 727 aaKnown RBP16.47■□□□□ 0.23
SRRM1-223ENST00000600523 ALDH1L1O75891 902 aa16.46■□□□□ 0.23
SRRM1-223ENST00000600523 IGKV5-2P06315 115 aa16.46■□□□□ 0.23
SRRM1-223ENST00000600523 BRPF1P55201 1214 aaPredicted RBP16.46■□□□□ 0.23
SRRM1-223ENST00000600523 GCKRQ14397 625 aa16.46■□□□□ 0.23
SRRM1-223ENST00000600523 ARHGAP27Q6ZUM4 889 aa16.46■□□□□ 0.23
SRRM1-223ENST00000600523 C9orf78Q9NZ63 289 aaPredicted RBP16.46■□□□□ 0.23
SRRM1-223ENST00000600523 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
SRRM1-223ENST00000600523 ANKRD31Q8N7Z5 1873 aa16.46■□□□□ 0.22
SRRM1-223ENST00000600523 KIAA1551Q9HCM1 1747 aa16.45■□□□□ 0.22
SRRM1-223ENST00000600523 PDE8AO60658 829 aa16.45■□□□□ 0.22
SRRM1-223ENST00000600523 HOXA10P31260 410 aaPredicted RBP16.45■□□□□ 0.22
SRRM1-223ENST00000600523 CCDC152Q4G0S7 254 aa16.45■□□□□ 0.22
SRRM1-223ENST00000600523 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
SRRM1-223ENST00000600523 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
SRRM1-223ENST00000600523 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
SRRM1-223ENST00000600523 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
SRRM1-223ENST00000600523 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
SRRM1-223ENST00000600523 UBE3BQ7Z3V4 1068 aa16.44■□□□□ 0.22
SRRM1-223ENST00000600523 FRAT1Q92837 279 aaPredicted RBP16.44■□□□□ 0.22
SRRM1-223ENST00000600523 DLEC1Q9Y238 1755 aa16.43■□□□□ 0.22
SRRM1-223ENST00000600523 CCT4P50991 539 aaKnown RBP16.43■□□□□ 0.22
SRRM1-223ENST00000600523 GRIPAP1Q4V328 841 aa16.43■□□□□ 0.22
SRRM1-223ENST00000600523 CC2D2BQ6DHV5 1058 aa16.43■□□□□ 0.22
SRRM1-223ENST00000600523 SYNE4Q8N205 404 aa16.43■□□□□ 0.22
SRRM1-223ENST00000600523 ZNF219Q9P2Y4 722 aaPredicted RBP16.43■□□□□ 0.22
SRRM1-223ENST00000600523 H7C1W4 665 aa16.42■□□□□ 0.22
SRRM1-223ENST00000600523 GRM8O00222 908 aa16.42■□□□□ 0.22
SRRM1-223ENST00000600523 C21orf2O43822 256 aa16.42■□□□□ 0.22
SRRM1-223ENST00000600523 BBOX1O75936 387 aa16.42■□□□□ 0.22
SRRM1-223ENST00000600523 SF3B3Q15393 1217 aaKnown RBP16.42■□□□□ 0.22
SRRM1-223ENST00000600523 TMC4Q7Z404 712 aa16.42■□□□□ 0.22
SRRM1-223ENST00000600523 HDAC5Q9UQL6 1122 aa16.42■□□□□ 0.22
SRRM1-223ENST00000600523 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
SRRM1-223ENST00000600523 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
SRRM1-223ENST00000600523 ZKSCAN2Q63HK3 967 aa16.41■□□□□ 0.22
SRRM1-223ENST00000600523 RTKN2Q8IZC4 609 aa16.41■□□□□ 0.22
SRRM1-223ENST00000600523 COL11A2P13942 1736 aaPredicted RBP16.41■□□□□ 0.22
SRRM1-223ENST00000600523 BRCA1P38398 1863 aaKnown RBP16.41■□□□□ 0.22
SRRM1-223ENST00000600523 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
SRRM1-223ENST00000600523 C3orf67Q6ZVT6 689 aa16.4■□□□□ 0.22
SRRM1-223ENST00000600523 JARID2Q92833 1246 aaPredicted RBP16.4■□□□□ 0.22
SRRM1-223ENST00000600523 ARFGEF1Q9Y6D6 1849 aa16.4■□□□□ 0.22
SRRM1-223ENST00000600523 BCAR3O75815 825 aa16.39■□□□□ 0.21
SRRM1-223ENST00000600523 MS4A1P11836 297 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms