RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 ANKRD13DQ6ZTN6 518 aa20.27■□□□□ 0.84
IRF3-226ENST00000600453 C7orf43Q8WVR3 580 aa20.27■□□□□ 0.84
IRF3-226ENST00000600453 NLRP3Q96P20 1036 aa20.27■□□□□ 0.84
IRF3-226ENST00000600453 NMRK2Q9NPI5 230 aa20.27■□□□□ 0.84
IRF3-226ENST00000600453 SLX4Q8IY92 1834 aa20.27■□□□□ 0.84
IRF3-226ENST00000600453 GLTPD2A6NH11 291 aa20.26■□□□□ 0.83
IRF3-226ENST00000600453 NTSR2O95665 410 aa20.26■□□□□ 0.83
IRF3-226ENST00000600453 SLC10A5Q5PT55 438 aa20.26■□□□□ 0.83
IRF3-226ENST00000600453 PLBD2Q8NHP8 589 aa20.26■□□□□ 0.83
IRF3-226ENST00000600453 RBM17Q96I25 401 aaKnown RBP20.26■□□□□ 0.83
IRF3-226ENST00000600453 COL11A2P13942 1736 aaPredicted RBP20.26■□□□□ 0.83
IRF3-226ENST00000600453 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
IRF3-226ENST00000600453 RIC1Q4ADV7 1423 aa20.26■□□□□ 0.83
IRF3-226ENST00000600453 FER1L6Q2WGJ9 1857 aa20.25■□□□□ 0.83
IRF3-226ENST00000600453 HOXA10P31260 410 aaPredicted RBP20.25■□□□□ 0.83
IRF3-226ENST00000600453 TMX4Q9H1E5 349 aaPredicted RBP20.25■□□□□ 0.83
IRF3-226ENST00000600453 RRAGCQ9HB90 399 aa20.25■□□□□ 0.83
IRF3-226ENST00000600453 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
IRF3-226ENST00000600453 ARFGEF2Q9Y6D5 1785 aa20.23■□□□□ 0.83
IRF3-226ENST00000600453 HSPA6P17066 643 aa20.23■□□□□ 0.83
IRF3-226ENST00000600453 PRELPP51888 382 aa20.23■□□□□ 0.83
IRF3-226ENST00000600453 NLRP10Q86W26 655 aa20.23■□□□□ 0.83
IRF3-226ENST00000600453 RBM46Q8TBY0 533 aaKnown RBP20.23■□□□□ 0.83
IRF3-226ENST00000600453 VEGFAP15692 232 aaPredicted RBP20.22■□□□□ 0.83
IRF3-226ENST00000600453 FKBP4Q02790 459 aaKnown RBP eCLIP20.22■□□□□ 0.83
IRF3-226ENST00000600453 WWC1Q8IX03 1113 aa20.22■□□□□ 0.83
IRF3-226ENST00000600453 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
IRF3-226ENST00000600453 ABCC12Q96J65 1359 aa20.21■□□□□ 0.83
IRF3-226ENST00000600453 ELL2O00472 640 aaPredicted RBP20.21■□□□□ 0.83
IRF3-226ENST00000600453 CCDC30Q5VVM6 783 aa20.21■□□□□ 0.83
IRF3-226ENST00000600453 CACNA1SQ13698 1873 aa20.21■□□□□ 0.83
IRF3-226ENST00000600453 DICER1Q9UPY3 1922 aaKnown RBP20.21■□□□□ 0.83
IRF3-226ENST00000600453 RIC3Q7Z5B4 369 aa20.2■□□□□ 0.82
IRF3-226ENST00000600453 IL16Q14005 1332 aa20.2■□□□□ 0.82
IRF3-226ENST00000600453 SH3TC1Q8TE82 1336 aa20.2■□□□□ 0.82
IRF3-226ENST00000600453 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
IRF3-226ENST00000600453 FSTL1Q12841 308 aa20.19■□□□□ 0.82
IRF3-226ENST00000600453 C8orf58Q8NAV2 365 aa20.19■□□□□ 0.82
IRF3-226ENST00000600453 PSMD1Q99460 953 aa20.19■□□□□ 0.82
IRF3-226ENST00000600453 DDX58O95786 925 aaKnown RBP20.18■□□□□ 0.82
IRF3-226ENST00000600453 TRIM28Q13263 835 aaKnown RBP20.18■□□□□ 0.82
IRF3-226ENST00000600453 SYNE4Q8N205 404 aa20.18■□□□□ 0.82
IRF3-226ENST00000600453 BBOX1O75936 387 aa20.17■□□□□ 0.82
IRF3-226ENST00000600453 HSP90B1P14625 803 aaKnown RBP20.17■□□□□ 0.82
IRF3-226ENST00000600453 WDR63Q8IWG1 891 aa20.17■□□□□ 0.82
IRF3-226ENST00000600453 ISCA1Q9BUE6 129 aa20.17■□□□□ 0.82
IRF3-226ENST00000600453 TNRC6CQ9HCJ0 1690 aaKnown RBP20.16■□□□□ 0.82
IRF3-226ENST00000600453 PPEF1O14829 653 aaPredicted RBP20.16■□□□□ 0.82
IRF3-226ENST00000600453 APLP1P51693 650 aa20.16■□□□□ 0.82
IRF3-226ENST00000600453 DDX46Q7L014 1031 aaKnown RBP20.16■□□□□ 0.82
IRF3-226ENST00000600453 JDP2Q8WYK2 163 aa20.16■□□□□ 0.82
IRF3-226ENST00000600453 STK31Q9BXU1 1019 aa20.16■□□□□ 0.82
IRF3-226ENST00000600453 ANKRD36CQ5JPF3 1778 aa20.16■□□□□ 0.82
IRF3-226ENST00000600453 HCLS1P14317 486 aaPredicted RBP20.15■□□□□ 0.82
IRF3-226ENST00000600453 IARSP41252 1262 aaKnown RBP20.15■□□□□ 0.82
IRF3-226ENST00000600453 SMC1BQ8NDV3 1235 aa20.15■□□□□ 0.82
IRF3-226ENST00000600453 ZNF277Q9NRM2 450 aaPredicted RBP20.15■□□□□ 0.82
IRF3-226ENST00000600453 OLFM4Q6UX06 510 aa20.14■□□□□ 0.81
IRF3-226ENST00000600453 VPS33BQ9H267 617 aa20.14■□□□□ 0.81
IRF3-226ENST00000600453 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.81
IRF3-226ENST00000600453 ATP6V0A2Q9Y487 856 aa20.14■□□□□ 0.81
IRF3-226ENST00000600453 ATP5J2-PTCD1G3V325 749 aa20.13■□□□□ 0.81
IRF3-226ENST00000600453 C3orf67Q6ZVT6 689 aa20.13■□□□□ 0.81
IRF3-226ENST00000600453 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
IRF3-226ENST00000600453 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
IRF3-226ENST00000600453 TIAM2Q8IVF5 1701 aa20.13■□□□□ 0.81
IRF3-226ENST00000600453 IQCA1LA6NCM1 817 aa20.12■□□□□ 0.81
IRF3-226ENST00000600453 TWISTNBQ3B726 338 aaPredicted RBP20.12■□□□□ 0.81
IRF3-226ENST00000600453 SP8Q8IXZ3 490 aa20.12■□□□□ 0.81
IRF3-226ENST00000600453 FAM9BQ8IZU0 186 aa20.12■□□□□ 0.81
IRF3-226ENST00000600453 TSPYL6Q8N831 410 aa20.12■□□□□ 0.81
IRF3-226ENST00000600453 CCDC191Q8NCU4 936 aa20.12■□□□□ 0.81
IRF3-226ENST00000600453 SUPT20HQ8NEM7 779 aa20.12■□□□□ 0.81
IRF3-226ENST00000600453 TCERG1O14776 1098 aaKnown RBP20.11■□□□□ 0.81
IRF3-226ENST00000600453 DDNO94850 711 aaPredicted RBP20.11■□□□□ 0.81
IRF3-226ENST00000600453 FAM89AQ96GI7 184 aa20.11■□□□□ 0.81
IRF3-226ENST00000600453 ABCC4O15439 1325 aa20.1■□□□□ 0.81
IRF3-226ENST00000600453 FZD9O00144 591 aa20.1■□□□□ 0.81
IRF3-226ENST00000600453 GRAPQ13588 217 aa20.1■□□□□ 0.81
IRF3-226ENST00000600453 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
IRF3-226ENST00000600453 ZBTB38Q8NAP3 1195 aaPredicted RBP20.1■□□□□ 0.81
IRF3-226ENST00000600453 GRAPLQ8TC17 118 aaPredicted RBP20.1■□□□□ 0.81
IRF3-226ENST00000600453 METTL22Q9BUU2 404 aaPredicted RBP20.1■□□□□ 0.81
IRF3-226ENST00000600453 SALL2Q9Y467 1007 aaPredicted RBP20.1■□□□□ 0.81
IRF3-226ENST00000600453 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
IRF3-226ENST00000600453 POTECB2RU33 542 aa20.09■□□□□ 0.81
IRF3-226ENST00000600453 EIF6P56537 245 aaKnown RBP20.09■□□□□ 0.81
IRF3-226ENST00000600453 KSR2Q6VAB6 950 aa20.09■□□□□ 0.81
IRF3-226ENST00000600453 LARGE2Q8N3Y3 721 aa20.09■□□□□ 0.81
IRF3-226ENST00000600453 L3MBTL3Q96JM7 780 aaPredicted RBP20.09■□□□□ 0.81
IRF3-226ENST00000600453 MYD88Q99836 296 aa20.09■□□□□ 0.81
IRF3-226ENST00000600453 IRS4O14654 1257 aaPredicted RBP20.08■□□□□ 0.81
IRF3-226ENST00000600453 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.81
IRF3-226ENST00000600453 MPNDQ8N594 471 aa20.08■□□□□ 0.81
IRF3-226ENST00000600453 CWC25Q9NXE8 425 aaPredicted RBP20.08■□□□□ 0.81
IRF3-226ENST00000600453 SLC4A2P04920 1241 aa20.07■□□□□ 0.8
IRF3-226ENST00000600453 GPC2Q8N158 579 aa20.07■□□□□ 0.8
IRF3-226ENST00000600453 MYH16Q9H6N6 1097 aa20.07■□□□□ 0.8
IRF3-226ENST00000600453 PCCAP05165 728 aaPredicted RBP20.06■□□□□ 0.8
IRF3-226ENST00000600453 DPP8Q6V1X1 898 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms