RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 CWC25Q9NXE8 425 aaPredicted RBP20.6■□□□□ 0.89
U2AF1L4-220ENST00000600296 SSFA2P28290 1259 aa20.59■□□□□ 0.89
U2AF1L4-220ENST00000600296 CLEC4GQ6UXB4 293 aa20.59■□□□□ 0.89
U2AF1L4-220ENST00000600296 C9orf78Q9NZ63 289 aaPredicted RBP20.59■□□□□ 0.89
U2AF1L4-220ENST00000600296 NARFQ9UHQ1 456 aa20.59■□□□□ 0.89
U2AF1L4-220ENST00000600296 LRRFIP2Q9Y608 721 aaKnown RBP20.59■□□□□ 0.89
U2AF1L4-220ENST00000600296 MTX1Q13505 466 aa20.58■□□□□ 0.89
U2AF1L4-220ENST00000600296 AKT1S1Q96B36 256 aa20.58■□□□□ 0.89
U2AF1L4-220ENST00000600296 RWDD1Q9H446 243 aaPredicted RBP20.58■□□□□ 0.89
U2AF1L4-220ENST00000600296 HDAC5Q9UQL6 1122 aa20.58■□□□□ 0.89
U2AF1L4-220ENST00000600296 UBN2Q6ZU65 1347 aa20.57■□□□□ 0.88
U2AF1L4-220ENST00000600296 USP42Q9H9J4 1324 aaKnown RBP20.57■□□□□ 0.88
U2AF1L4-220ENST00000600296 H7C1W4 665 aa20.57■□□□□ 0.88
U2AF1L4-220ENST00000600296 NLRP10Q86W26 655 aa20.57■□□□□ 0.88
U2AF1L4-220ENST00000600296 KAZALD1Q96I82 304 aa20.57■□□□□ 0.88
U2AF1L4-220ENST00000600296 BCL2L12Q9HB09 334 aa20.57■□□□□ 0.88
U2AF1L4-220ENST00000600296 ZNF652Q9Y2D9 606 aa20.57■□□□□ 0.88
U2AF1L4-220ENST00000600296 SUCLG2Q96I99 432 aa20.56■□□□□ 0.88
U2AF1L4-220ENST00000600296 ZNF827Q17R98 1081 aa20.55■□□□□ 0.88
U2AF1L4-220ENST00000600296 SMC5Q8IY18 1101 aa20.55■□□□□ 0.88
U2AF1L4-220ENST00000600296 ARHGEF1Q92888 912 aaKnown RBP20.55■□□□□ 0.88
U2AF1L4-220ENST00000600296 CDHR2Q9BYE9 1310 aa20.54■□□□□ 0.88
U2AF1L4-220ENST00000600296 PCCAP05165 728 aaPredicted RBP20.54■□□□□ 0.88
U2AF1L4-220ENST00000600296 ATP8B2P98198 1209 aa20.54■□□□□ 0.88
U2AF1L4-220ENST00000600296 SLC15A2Q16348 729 aa20.54■□□□□ 0.88
U2AF1L4-220ENST00000600296 PARP10Q53GL7 1025 aa20.54■□□□□ 0.88
U2AF1L4-220ENST00000600296 ARXQ96QS3 562 aa20.54■□□□□ 0.88
U2AF1L4-220ENST00000600296 NRXN2Q9P2S2 1712 aa20.53■□□□□ 0.88
U2AF1L4-220ENST00000600296 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.53■□□□□ 0.88
U2AF1L4-220ENST00000600296 POLA2Q14181 598 aa20.53■□□□□ 0.88
U2AF1L4-220ENST00000600296 RABL6Q3YEC7 729 aaPredicted RBP20.53■□□□□ 0.88
U2AF1L4-220ENST00000600296 TRAPPC3LQ5T215 181 aa20.53■□□□□ 0.88
U2AF1L4-220ENST00000600296 UBE3BQ7Z3V4 1068 aa20.53■□□□□ 0.88
U2AF1L4-220ENST00000600296 SSH3Q8TE77 659 aa20.53■□□□□ 0.88
U2AF1L4-220ENST00000600296 STK32BQ9NY57 414 aa20.53■□□□□ 0.88
U2AF1L4-220ENST00000600296 HMMRO75330 724 aa20.52■□□□□ 0.88
U2AF1L4-220ENST00000600296 SMIM5Q71RC9 77 aa20.52■□□□□ 0.88
U2AF1L4-220ENST00000600296 ZBTB38Q8NAP3 1195 aaPredicted RBP20.52■□□□□ 0.88
U2AF1L4-220ENST00000600296 PLA2G12BQ9BX93 195 aa20.52■□□□□ 0.88
U2AF1L4-220ENST00000600296 PNMA6EA0A0J9YXQ4 647 aa20.51■□□□□ 0.87
U2AF1L4-220ENST00000600296 GPTP24298 496 aa20.51■□□□□ 0.87
U2AF1L4-220ENST00000600296 USPL1Q5W0Q7 1092 aa20.51■□□□□ 0.87
U2AF1L4-220ENST00000600296 BICC1Q9H694 974 aaKnown RBP20.51■□□□□ 0.87
U2AF1L4-220ENST00000600296 SRP68Q9UHB9 627 aaKnown RBP20.51■□□□□ 0.87
U2AF1L4-220ENST00000600296 ZPR1O75312 459 aa20.5■□□□□ 0.87
U2AF1L4-220ENST00000600296 GCC1Q96CN9 775 aa20.5■□□□□ 0.87
U2AF1L4-220ENST00000600296 DCTPP1Q9H773 170 aa20.5■□□□□ 0.87
U2AF1L4-220ENST00000600296 LRP5O75197 1615 aa20.49■□□□□ 0.87
U2AF1L4-220ENST00000600296 PHF14O94880 888 aa20.49■□□□□ 0.87
U2AF1L4-220ENST00000600296 NTSR2O95665 410 aa20.49■□□□□ 0.87
U2AF1L4-220ENST00000600296 RFC4P35249 363 aa20.49■□□□□ 0.87
U2AF1L4-220ENST00000600296 EPHA10Q5JZY3 1008 aa20.49■□□□□ 0.87
U2AF1L4-220ENST00000600296 PPP1R42Q7Z4L9 355 aa20.49■□□□□ 0.87
U2AF1L4-220ENST00000600296 NIP7Q9Y221 180 aaKnown RBP eCLIP20.49■□□□□ 0.87
U2AF1L4-220ENST00000600296 ZBTB7AO95365 584 aa20.48■□□□□ 0.87
U2AF1L4-220ENST00000600296 FOXO4P98177 505 aa20.48■□□□□ 0.87
U2AF1L4-220ENST00000600296 FLAD1Q8NFF5 587 aa20.48■□□□□ 0.87
U2AF1L4-220ENST00000600296 RIC1Q4ADV7 1423 aa20.47■□□□□ 0.87
U2AF1L4-220ENST00000600296 SUSD4Q5VX71 490 aa20.47■□□□□ 0.87
U2AF1L4-220ENST00000600296 TBC1D9BQ66K14 1250 aa20.47■□□□□ 0.87
U2AF1L4-220ENST00000600296 SPON1Q9HCB6 807 aa20.47■□□□□ 0.87
U2AF1L4-220ENST00000600296 ATF5Q9Y2D1 282 aaPredicted RBP20.47■□□□□ 0.87
U2AF1L4-220ENST00000600296 TNRC6CQ9HCJ0 1690 aaKnown RBP20.47■□□□□ 0.87
U2AF1L4-220ENST00000600296 PNPLA7Q6ZV29 1317 aa20.47■□□□□ 0.87
U2AF1L4-220ENST00000600296 GYS1P13807 737 aa20.46■□□□□ 0.87
U2AF1L4-220ENST00000600296 JARID2Q92833 1246 aaPredicted RBP20.46■□□□□ 0.87
U2AF1L4-220ENST00000600296 UTP14AQ9BVJ6 771 aaKnown RBP20.46■□□□□ 0.87
U2AF1L4-220ENST00000600296 SRGAP3O43295 1099 aa20.45■□□□□ 0.86
U2AF1L4-220ENST00000600296 FAM89AQ96GI7 184 aa20.45■□□□□ 0.86
U2AF1L4-220ENST00000600296 TFCP2L1Q9NZI6 479 aa20.45■□□□□ 0.86
U2AF1L4-220ENST00000600296 TRMT112Q9UI30 125 aaKnown RBP20.45■□□□□ 0.86
U2AF1L4-220ENST00000600296 SH3TC1Q8TE82 1336 aa20.45■□□□□ 0.86
U2AF1L4-220ENST00000600296 CARMIL3Q8ND23 1372 aa20.45■□□□□ 0.86
U2AF1L4-220ENST00000600296 A0A1B0GUL6 1792 aa20.44■□□□□ 0.86
U2AF1L4-220ENST00000600296 SPEF2Q9C093 1822 aa20.44■□□□□ 0.86
U2AF1L4-220ENST00000600296 NOP58Q9Y2X3 529 aaKnown RBP20.44■□□□□ 0.86
U2AF1L4-220ENST00000600296 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
U2AF1L4-220ENST00000600296 CSF1RP07333 972 aa20.43■□□□□ 0.86
U2AF1L4-220ENST00000600296 RFX5P48382 616 aaPredicted RBP20.43■□□□□ 0.86
U2AF1L4-220ENST00000600296 NUCB1Q02818 461 aa20.43■□□□□ 0.86
U2AF1L4-220ENST00000600296 COL23A1Q86Y22 540 aaPredicted RBP20.43■□□□□ 0.86
U2AF1L4-220ENST00000600296 PDZRN3Q9UPQ7 1066 aa20.43■□□□□ 0.86
U2AF1L4-220ENST00000600296 IRS4O14654 1257 aaPredicted RBP20.42■□□□□ 0.86
U2AF1L4-220ENST00000600296 PTGER2P43116 358 aa20.42■□□□□ 0.86
U2AF1L4-220ENST00000600296 SYNE4Q8N205 404 aa20.42■□□□□ 0.86
U2AF1L4-220ENST00000600296 NYXQ9GZU5 481 aa20.42■□□□□ 0.86
U2AF1L4-220ENST00000600296 ABCC12Q96J65 1359 aa20.42■□□□□ 0.86
U2AF1L4-220ENST00000600296 PDE8AO60658 829 aa20.41■□□□□ 0.86
U2AF1L4-220ENST00000600296 CTSWP56202 376 aa20.41■□□□□ 0.86
U2AF1L4-220ENST00000600296 NFIXQ14938 502 aa20.41■□□□□ 0.86
U2AF1L4-220ENST00000600296 RTL5Q5HYW3 569 aaPredicted RBP20.41■□□□□ 0.86
U2AF1L4-220ENST00000600296 LMBR1LQ6UX01 489 aa20.41■□□□□ 0.86
U2AF1L4-220ENST00000600296 SETDB2Q96T68 719 aa20.41■□□□□ 0.86
U2AF1L4-220ENST00000600296 COPRSQ9NQ92 184 aa20.41■□□□□ 0.86
U2AF1L4-220ENST00000600296 RTL9Q8NET4 1388 aa20.41■□□□□ 0.86
U2AF1L4-220ENST00000600296 HSP90B1P14625 803 aaKnown RBP20.4■□□□□ 0.86
U2AF1L4-220ENST00000600296 TM4SF1P30408 202 aa20.4■□□□□ 0.86
U2AF1L4-220ENST00000600296 SLC10A5Q5PT55 438 aa20.39■□□□□ 0.85
U2AF1L4-220ENST00000600296 RAB11FIP3O75154 756 aa20.38■□□□□ 0.85
U2AF1L4-220ENST00000600296 PTPN12Q05209 780 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms