RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 RNF123Q5XPI4 1314 aa23.32■■□□□ 1.32
CHMP2A-203ENST00000597209 HOXA10P31260 410 aaPredicted RBP23.31■■□□□ 1.32
CHMP2A-203ENST00000597209 CHPF2Q9P2E5 772 aa23.31■■□□□ 1.32
CHMP2A-203ENST00000597209 DBF4Q9UBU7 674 aaPredicted RBP23.31■■□□□ 1.32
CHMP2A-203ENST00000597209 ANKRD36CQ5JPF3 1778 aa23.3■■□□□ 1.32
CHMP2A-203ENST00000597209 AIMP1Q12904 312 aaKnown RBP23.3■■□□□ 1.32
CHMP2A-203ENST00000597209 SLC10A5Q5PT55 438 aa23.3■■□□□ 1.32
CHMP2A-203ENST00000597209 DUSP27Q5VZP5 1158 aa23.3■■□□□ 1.32
CHMP2A-203ENST00000597209 C16orf71Q8IYS4 520 aaPredicted RBP23.3■■□□□ 1.32
CHMP2A-203ENST00000597209 UTP14AQ9BVJ6 771 aaKnown RBP23.3■■□□□ 1.32
CHMP2A-203ENST00000597209 TCIRG1Q13488 830 aa23.29■■□□□ 1.32
CHMP2A-203ENST00000597209 DPY19L2Q6NUT2 758 aa23.29■■□□□ 1.32
CHMP2A-203ENST00000597209 RTKN2Q8IZC4 609 aa23.29■■□□□ 1.32
CHMP2A-203ENST00000597209 ANP32CO43423 234 aa23.28■■□□□ 1.32
CHMP2A-203ENST00000597209 FKBP4Q02790 459 aaKnown RBP eCLIP23.28■■□□□ 1.32
CHMP2A-203ENST00000597209 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
CHMP2A-203ENST00000597209 RPGRQ92834 1020 aaKnown RBP23.28■■□□□ 1.32
CHMP2A-203ENST00000597209 CRAMP1Q96RY5 1269 aa23.28■■□□□ 1.32
CHMP2A-203ENST00000597209 HYPKQ9NX55 129 aa23.28■■□□□ 1.32
CHMP2A-203ENST00000597209 CCDC27Q2M243 656 aa23.27■■□□□ 1.32
CHMP2A-203ENST00000597209 CC2D2BQ6DHV5 1058 aa23.27■■□□□ 1.32
CHMP2A-203ENST00000597209 NLRP10Q86W26 655 aa23.27■■□□□ 1.32
CHMP2A-203ENST00000597209 PLBD2Q8NHP8 589 aa23.27■■□□□ 1.32
CHMP2A-203ENST00000597209 NLRP3Q96P20 1036 aa23.27■■□□□ 1.32
CHMP2A-203ENST00000597209 VEGFAP15692 232 aaPredicted RBP23.26■■□□□ 1.31
CHMP2A-203ENST00000597209 FSTL1Q12841 308 aa23.26■■□□□ 1.31
CHMP2A-203ENST00000597209 ANKRD13DQ6ZTN6 518 aa23.26■■□□□ 1.31
CHMP2A-203ENST00000597209 RBM17Q96I25 401 aaKnown RBP23.26■■□□□ 1.31
CHMP2A-203ENST00000597209 WDR90Q96KV7 1748 aa23.25■■□□□ 1.31
CHMP2A-203ENST00000597209 GRIPAP1Q4V328 841 aa23.25■■□□□ 1.31
CHMP2A-203ENST00000597209 SNED1Q8TER0 1413 aa23.25■■□□□ 1.31
CHMP2A-203ENST00000597209 CHMP4AQ9BY43 222 aa23.24■■□□□ 1.31
CHMP2A-203ENST00000597209 MRS2Q9HD23 443 aa23.24■■□□□ 1.31
CHMP2A-203ENST00000597209 OLFM4Q6UX06 510 aa23.23■■□□□ 1.31
CHMP2A-203ENST00000597209 PSMD1Q99460 953 aa23.23■■□□□ 1.31
CHMP2A-203ENST00000597209 POTECB2RU33 542 aa23.22■■□□□ 1.31
CHMP2A-203ENST00000597209 APLP1P51693 650 aa23.22■■□□□ 1.31
CHMP2A-203ENST00000597209 C3orf67Q6ZVT6 689 aa23.22■■□□□ 1.31
CHMP2A-203ENST00000597209 ISCA1Q9BUE6 129 aa23.22■■□□□ 1.31
CHMP2A-203ENST00000597209 SYNE4Q8N205 404 aa23.21■■□□□ 1.31
CHMP2A-203ENST00000597209 ZNF277Q9NRM2 450 aaPredicted RBP23.21■■□□□ 1.31
CHMP2A-203ENST00000597209 TRMT112Q9UI30 125 aaKnown RBP23.21■■□□□ 1.31
CHMP2A-203ENST00000597209 SH3TC1Q8TE82 1336 aa23.2■■□□□ 1.3
CHMP2A-203ENST00000597209 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
CHMP2A-203ENST00000597209 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
CHMP2A-203ENST00000597209 SMC1BQ8NDV3 1235 aa23.2■■□□□ 1.3
CHMP2A-203ENST00000597209 IL16Q14005 1332 aa23.19■■□□□ 1.3
CHMP2A-203ENST00000597209 ELL2O00472 640 aaPredicted RBP23.19■■□□□ 1.3
CHMP2A-203ENST00000597209 PPEF1O14829 653 aaPredicted RBP23.19■■□□□ 1.3
CHMP2A-203ENST00000597209 IARSP41252 1262 aaKnown RBP23.19■■□□□ 1.3
CHMP2A-203ENST00000597209 TRIM28Q13263 835 aaKnown RBP23.19■■□□□ 1.3
CHMP2A-203ENST00000597209 DDNO94850 711 aaPredicted RBP23.17■■□□□ 1.3
CHMP2A-203ENST00000597209 CCDC30Q5VVM6 783 aa23.17■■□□□ 1.3
CHMP2A-203ENST00000597209 LAMB2P55268 1798 aa23.17■■□□□ 1.3
CHMP2A-203ENST00000597209 ABCC4O15439 1325 aa23.16■■□□□ 1.3
CHMP2A-203ENST00000597209 BBOX1O75936 387 aa23.16■■□□□ 1.3
CHMP2A-203ENST00000597209 HCLS1P14317 486 aaPredicted RBP23.16■■□□□ 1.3
CHMP2A-203ENST00000597209 GOLGA2Q08379 1002 aa23.16■■□□□ 1.3
CHMP2A-203ENST00000597209 L3MBTL3Q96JM7 780 aaPredicted RBP23.16■■□□□ 1.3
CHMP2A-203ENST00000597209 PHAXQ9H814 394 aaKnown RBP23.16■■□□□ 1.3
CHMP2A-203ENST00000597209 ATP6V0A2Q9Y487 856 aa23.16■■□□□ 1.3
CHMP2A-203ENST00000597209 FZD9O00144 591 aa23.15■■□□□ 1.3
CHMP2A-203ENST00000597209 TMX4Q9H1E5 349 aaPredicted RBP23.15■■□□□ 1.3
CHMP2A-203ENST00000597209 ATP5J2-PTCD1G3V325 749 aa23.14■■□□□ 1.29
CHMP2A-203ENST00000597209 RIC3Q7Z5B4 369 aa23.14■■□□□ 1.29
CHMP2A-203ENST00000597209 TSPYL6Q8N831 410 aa23.14■■□□□ 1.29
CHMP2A-203ENST00000597209 IQCA1LA6NCM1 817 aa23.13■■□□□ 1.29
CHMP2A-203ENST00000597209 DDX46Q7L014 1031 aaKnown RBP23.13■■□□□ 1.29
CHMP2A-203ENST00000597209 SP8Q8IXZ3 490 aa23.13■■□□□ 1.29
CHMP2A-203ENST00000597209 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
CHMP2A-203ENST00000597209 VPS33BQ9H267 617 aa23.13■■□□□ 1.29
CHMP2A-203ENST00000597209 GRAPQ13588 217 aa23.12■■□□□ 1.29
CHMP2A-203ENST00000597209 SF3B3Q15393 1217 aaKnown RBP23.12■■□□□ 1.29
CHMP2A-203ENST00000597209 DDX60Q8IY21 1712 aaKnown RBP23.12■■□□□ 1.29
CHMP2A-203ENST00000597209 GRAPLQ8TC17 118 aaPredicted RBP23.12■■□□□ 1.29
CHMP2A-203ENST00000597209 TSR2Q969E8 191 aaKnown RBP23.12■■□□□ 1.29
CHMP2A-203ENST00000597209 FAM89AQ96GI7 184 aa23.12■■□□□ 1.29
CHMP2A-203ENST00000597209 SCN4AP35499 1836 aa23.12■■□□□ 1.29
CHMP2A-203ENST00000597209 ZNF541Q9H0D2 1346 aa23.11■■□□□ 1.29
CHMP2A-203ENST00000597209 DDX58O95786 925 aaKnown RBP23.11■■□□□ 1.29
CHMP2A-203ENST00000597209 TMC4Q7Z404 712 aa23.11■■□□□ 1.29
CHMP2A-203ENST00000597209 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
CHMP2A-203ENST00000597209 TCERG1O14776 1098 aaKnown RBP23.1■■□□□ 1.29
CHMP2A-203ENST00000597209 DNAJC5GQ8N7S2 189 aa23.1■■□□□ 1.29
CHMP2A-203ENST00000597209 RTFDC1Q9BY42 306 aaPredicted RBP23.1■■□□□ 1.29
CHMP2A-203ENST00000597209 CEP350Q5VT06 3117 aa23.1■■□□□ 1.29
CHMP2A-203ENST00000597209 TWISTNBQ3B726 338 aaPredicted RBP23.09■■□□□ 1.29
CHMP2A-203ENST00000597209 GPC2Q8N158 579 aa23.09■■□□□ 1.29
CHMP2A-203ENST00000597209 ZBTB38Q8NAP3 1195 aaPredicted RBP23.09■■□□□ 1.29
CHMP2A-203ENST00000597209 CCDC191Q8NCU4 936 aa23.09■■□□□ 1.29
CHMP2A-203ENST00000597209 SUPT20HQ8NEM7 779 aa23.09■■□□□ 1.29
CHMP2A-203ENST00000597209 METTL22Q9BUU2 404 aaPredicted RBP23.09■■□□□ 1.29
CHMP2A-203ENST00000597209 HSP90B1P14625 803 aaKnown RBP23.08■■□□□ 1.29
CHMP2A-203ENST00000597209 SLC51AQ86UW1 340 aa23.08■■□□□ 1.29
CHMP2A-203ENST00000597209 LARGE2Q8N3Y3 721 aa23.08■■□□□ 1.29
CHMP2A-203ENST00000597209 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
CHMP2A-203ENST00000597209 COL4A5P29400 1685 aa23.08■■□□□ 1.29
CHMP2A-203ENST00000597209 IRS4O14654 1257 aaPredicted RBP23.07■■□□□ 1.28
CHMP2A-203ENST00000597209 EIF6P56537 245 aaKnown RBP23.07■■□□□ 1.28
CHMP2A-203ENST00000597209 MYD88Q99836 296 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms