RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 TRIM28Q13263 835 aaKnown RBP23.2■■□□□ 1.3
IRF3-216ENST00000597180 KSR2Q6VAB6 950 aa23.2■■□□□ 1.3
IRF3-216ENST00000597180 UTP14AQ9BVJ6 771 aaKnown RBP23.2■■□□□ 1.3
IRF3-216ENST00000597180 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
IRF3-216ENST00000597180 GTF2E1P29083 439 aaPredicted RBP23.19■■□□□ 1.3
IRF3-216ENST00000597180 ERFEQ4G0M1 354 aa23.19■■□□□ 1.3
IRF3-216ENST00000597180 NUTM1Q86Y26 1132 aa23.19■■□□□ 1.3
IRF3-216ENST00000597180 ZNF428Q96B54 188 aa23.19■■□□□ 1.3
IRF3-216ENST00000597180 METTL22Q9BUU2 404 aaPredicted RBP23.19■■□□□ 1.3
IRF3-216ENST00000597180 DDX60Q8IY21 1712 aaKnown RBP23.19■■□□□ 1.3
IRF3-216ENST00000597180 CT47B1P0C2W7 299 aaPredicted RBP23.18■■□□□ 1.3
IRF3-216ENST00000597180 WWC3Q9ULE0 1092 aa23.18■■□□□ 1.3
IRF3-216ENST00000597180 MAP3K2Q9Y2U5 619 aa23.18■■□□□ 1.3
IRF3-216ENST00000597180 PI4KAP2A4QPH2 592 aa23.17■■□□□ 1.3
IRF3-216ENST00000597180 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
IRF3-216ENST00000597180 GRIN3BO60391 1043 aa23.17■■□□□ 1.3
IRF3-216ENST00000597180 PI4KAP1Q8N8J0 262 aa23.17■■□□□ 1.3
IRF3-216ENST00000597180 GOLGB1Q14789 3259 aaKnown RBP23.16■■□□□ 1.3
IRF3-216ENST00000597180 SRGNP10124 158 aa23.16■■□□□ 1.3
IRF3-216ENST00000597180 DALRD3Q5D0E6 543 aaKnown RBP23.16■■□□□ 1.3
IRF3-216ENST00000597180 SLC10A5Q5PT55 438 aa23.16■■□□□ 1.3
IRF3-216ENST00000597180 MYD88Q99836 296 aa23.16■■□□□ 1.3
IRF3-216ENST00000597180 BCS1LQ9Y276 419 aa23.16■■□□□ 1.3
IRF3-216ENST00000597180 SLX4Q8IY92 1834 aa23.15■■□□□ 1.3
IRF3-216ENST00000597180 FKBP5Q13451 457 aaPredicted RBP23.15■■□□□ 1.3
IRF3-216ENST00000597180 SH3TC1Q8TE82 1336 aa23.14■■□□□ 1.3
IRF3-216ENST00000597180 CRY2Q49AN0 593 aa23.14■■□□□ 1.29
IRF3-216ENST00000597180 STYK1Q6J9G0 422 aa23.14■■□□□ 1.29
IRF3-216ENST00000597180 TRMT112Q9UI30 125 aaKnown RBP23.14■■□□□ 1.29
IRF3-216ENST00000597180 ALDH1L2Q3SY69 923 aa23.13■■□□□ 1.29
IRF3-216ENST00000597180 MRPL50Q8N5N7 158 aaKnown RBP23.13■■□□□ 1.29
IRF3-216ENST00000597180 TTLL6Q8N841 843 aa23.13■■□□□ 1.29
IRF3-216ENST00000597180 CCDC191Q8NCU4 936 aa23.13■■□□□ 1.29
IRF3-216ENST00000597180 MASTLQ96GX5 879 aa23.13■■□□□ 1.29
IRF3-216ENST00000597180 NPR1P16066 1061 aa23.12■■□□□ 1.29
IRF3-216ENST00000597180 DNAAF4Q8WXU2 420 aa23.12■■□□□ 1.29
IRF3-216ENST00000597180 SSH1Q8WYL5 1049 aa23.12■■□□□ 1.29
IRF3-216ENST00000597180 ZNF622Q969S3 477 aaKnown RBP eCLIP23.12■■□□□ 1.29
IRF3-216ENST00000597180 IGKV5-2P06315 115 aa23.11■■□□□ 1.29
IRF3-216ENST00000597180 NEXNQ0ZGT2 675 aa23.11■■□□□ 1.29
IRF3-216ENST00000597180 SYNE4Q8N205 404 aa23.11■■□□□ 1.29
IRF3-216ENST00000597180 CNKSR1Q969H4 720 aa23.11■■□□□ 1.29
IRF3-216ENST00000597180 CWC25Q9NXE8 425 aaPredicted RBP23.11■■□□□ 1.29
IRF3-216ENST00000597180 MYH3P11055 1940 aa23.1■■□□□ 1.29
IRF3-216ENST00000597180 UTRNP46939 3433 aa23.1■■□□□ 1.29
IRF3-216ENST00000597180 FER1L6Q2WGJ9 1857 aa23.09■■□□□ 1.29
IRF3-216ENST00000597180 C3orf67Q6ZVT6 689 aa23.09■■□□□ 1.29
IRF3-216ENST00000597180 ZBTB38Q8NAP3 1195 aaPredicted RBP23.09■■□□□ 1.29
IRF3-216ENST00000597180 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
IRF3-216ENST00000597180 SBF1O95248 1867 aa23.09■■□□□ 1.29
IRF3-216ENST00000597180 NEURL1BA8MQ27 555 aa23.08■■□□□ 1.29
IRF3-216ENST00000597180 FAM89AQ96GI7 184 aa23.08■■□□□ 1.29
IRF3-216ENST00000597180 PTPRCP08575 1304 aa23.08■■□□□ 1.28
IRF3-216ENST00000597180 PCCAP05165 728 aaPredicted RBP23.07■■□□□ 1.28
IRF3-216ENST00000597180 HCLS1P14317 486 aaPredicted RBP23.07■■□□□ 1.28
IRF3-216ENST00000597180 HOXA10P31260 410 aaPredicted RBP23.07■■□□□ 1.28
IRF3-216ENST00000597180 LINS1Q8NG48 757 aa23.07■■□□□ 1.28
IRF3-216ENST00000597180 F6X3S4 739 aa23.06■■□□□ 1.28
IRF3-216ENST00000597180 BRPF1P55201 1214 aaPredicted RBP23.06■■□□□ 1.28
IRF3-216ENST00000597180 CWF19L2Q2TBE0 894 aaKnown RBP23.06■■□□□ 1.28
IRF3-216ENST00000597180 PRPF40BQ6NWY9 871 aaKnown RBP23.06■■□□□ 1.28
IRF3-216ENST00000597180 RPGRQ92834 1020 aaKnown RBP23.06■■□□□ 1.28
IRF3-216ENST00000597180 BCL2L13Q9BXK5 485 aa23.06■■□□□ 1.28
IRF3-216ENST00000597180 SMC4Q9NTJ3 1288 aa23.06■■□□□ 1.28
IRF3-216ENST00000597180 TAF1P21675 1872 aa23.06■■□□□ 1.28
IRF3-216ENST00000597180 CCDC88AQ3V6T2 1871 aa23.05■■□□□ 1.28
IRF3-216ENST00000597180 ALDH1B1P30837 517 aa23.05■■□□□ 1.28
IRF3-216ENST00000597180 IRS4O14654 1257 aaPredicted RBP23.04■■□□□ 1.28
IRF3-216ENST00000597180 RARSP54136 660 aaKnown RBP23.04■■□□□ 1.28
IRF3-216ENST00000597180 BEND3Q5T5X7 828 aa23.04■■□□□ 1.28
IRF3-216ENST00000597180 CRAMP1Q96RY5 1269 aa23.04■■□□□ 1.28
IRF3-216ENST00000597180 CDHR2Q9BYE9 1310 aa23.04■■□□□ 1.28
IRF3-216ENST00000597180 HSP90B1P14625 803 aaKnown RBP23.03■■□□□ 1.28
IRF3-216ENST00000597180 GCKRQ14397 625 aa23.03■■□□□ 1.28
IRF3-216ENST00000597180 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
IRF3-216ENST00000597180 ARHGAP27Q6ZUM4 889 aa23.03■■□□□ 1.28
IRF3-216ENST00000597180 RBM17Q96I25 401 aaKnown RBP23.03■■□□□ 1.28
IRF3-216ENST00000597180 SF3B3Q15393 1217 aaKnown RBP23.02■■□□□ 1.28
IRF3-216ENST00000597180 C7orf43Q8WVR3 580 aa23.02■■□□□ 1.28
IRF3-216ENST00000597180 H7C1W4 665 aa23.01■■□□□ 1.27
IRF3-216ENST00000597180 C21orf2O43822 256 aa23■■□□□ 1.27
IRF3-216ENST00000597180 SOGA3Q5TF21 947 aa23■■□□□ 1.27
IRF3-216ENST00000597180 JARID2Q92833 1246 aaPredicted RBP23■■□□□ 1.27
IRF3-216ENST00000597180 DICER1Q9UPY3 1922 aaKnown RBP23■■□□□ 1.27
IRF3-216ENST00000597180 PDE8AO60658 829 aa22.99■■□□□ 1.27
IRF3-216ENST00000597180 ABCC4O15439 1325 aa22.99■■□□□ 1.27
IRF3-216ENST00000597180 ALDH1L1O75891 902 aa22.98■■□□□ 1.27
IRF3-216ENST00000597180 CASP7P55210 303 aa22.98■■□□□ 1.27
IRF3-216ENST00000597180 SLC4A10Q6U841 1118 aa22.98■■□□□ 1.27
IRF3-216ENST00000597180 ZNF219Q9P2Y4 722 aaPredicted RBP22.98■■□□□ 1.27
IRF3-216ENST00000597180 LRRC37AA6NMS7 1700 aa22.97■■□□□ 1.27
IRF3-216ENST00000597180 YY1P25490 414 aa22.97■■□□□ 1.27
IRF3-216ENST00000597180 DDX46Q7L014 1031 aaKnown RBP22.97■■□□□ 1.27
IRF3-216ENST00000597180 UBE3BQ7Z3V4 1068 aa22.97■■□□□ 1.27
IRF3-216ENST00000597180 SRCIN1Q9C0H9 1055 aa22.97■■□□□ 1.27
IRF3-216ENST00000597180 NOB1Q9ULX3 412 aaKnown RBP22.97■■□□□ 1.27
IRF3-216ENST00000597180 KIF16BQ96L93 1317 aa22.97■■□□□ 1.27
IRF3-216ENST00000597180 SNED1Q8TER0 1413 aa22.97■■□□□ 1.27
IRF3-216ENST00000597180 NFKBIEO00221 500 aa22.96■■□□□ 1.27
IRF3-216ENST00000597180 PLA2G12BQ9BX93 195 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms