RNA–Protein interactions for RNA: ENST00000594087.1

CCDC61-202, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC61, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-202ENST00000594087 STK31Q9BXU1 1019 aa22.83■■□□□ 1.25
CCDC61-202ENST00000594087 SALL2Q9Y467 1007 aaPredicted RBP22.83■■□□□ 1.25
CCDC61-202ENST00000594087 ANKRD36CQ5JPF3 1778 aa22.83■■□□□ 1.24
CCDC61-202ENST00000594087 ARFGEF2Q9Y6D5 1785 aa22.83■■□□□ 1.24
CCDC61-202ENST00000594087 DDX58O95786 925 aaKnown RBP22.82■■□□□ 1.24
CCDC61-202ENST00000594087 TWISTNBQ3B726 338 aaPredicted RBP22.82■■□□□ 1.24
CCDC61-202ENST00000594087 RPGRQ92834 1020 aaKnown RBP22.82■■□□□ 1.24
CCDC61-202ENST00000594087 LTBP3Q9NS15 1303 aa22.82■■□□□ 1.24
CCDC61-202ENST00000594087 HOXA10P31260 410 aaPredicted RBP22.81■■□□□ 1.24
CCDC61-202ENST00000594087 RIC3Q7Z5B4 369 aa22.81■■□□□ 1.24
CCDC61-202ENST00000594087 TSPYL6Q8N831 410 aa22.81■■□□□ 1.24
CCDC61-202ENST00000594087 TRMT112Q9UI30 125 aaKnown RBP22.81■■□□□ 1.24
CCDC61-202ENST00000594087 FANCIQ9NVI1 1328 aa22.81■■□□□ 1.24
CCDC61-202ENST00000594087 CCER2I3L3R5 266 aa22.8■■□□□ 1.24
CCDC61-202ENST00000594087 NFKBIEO00221 500 aa22.8■■□□□ 1.24
CCDC61-202ENST00000594087 RASSF7Q02833 373 aa22.8■■□□□ 1.24
CCDC61-202ENST00000594087 TRIM28Q13263 835 aaKnown RBP22.8■■□□□ 1.24
CCDC61-202ENST00000594087 CCDC93Q567U6 631 aa22.8■■□□□ 1.24
CCDC61-202ENST00000594087 ZNF526Q8TF50 670 aaPredicted RBP22.8■■□□□ 1.24
CCDC61-202ENST00000594087 C7orf43Q8WVR3 580 aa22.8■■□□□ 1.24
CCDC61-202ENST00000594087 RBM17Q96I25 401 aaKnown RBP22.8■■□□□ 1.24
CCDC61-202ENST00000594087 ISCA1Q9BUE6 129 aa22.8■■□□□ 1.24
CCDC61-202ENST00000594087 TAOK3Q9H2K8 898 aa22.8■■□□□ 1.24
CCDC61-202ENST00000594087 MYH16Q9H6N6 1097 aa22.8■■□□□ 1.24
CCDC61-202ENST00000594087 ZNF219Q9P2Y4 722 aaPredicted RBP22.8■■□□□ 1.24
CCDC61-202ENST00000594087 SH3TC1Q8TE82 1336 aa22.8■■□□□ 1.24
CCDC61-202ENST00000594087 CRAMP1Q96RY5 1269 aa22.79■■□□□ 1.24
CCDC61-202ENST00000594087 PHAXQ9H814 394 aaKnown RBP22.79■■□□□ 1.24
CCDC61-202ENST00000594087 SLX4Q8IY92 1834 aa22.79■■□□□ 1.24
CCDC61-202ENST00000594087 KDM2BQ8NHM5 1336 aa22.79■■□□□ 1.24
CCDC61-202ENST00000594087 SBF1O95248 1867 aa22.78■■□□□ 1.24
CCDC61-202ENST00000594087 GRIPAP1Q4V328 841 aa22.78■■□□□ 1.24
CCDC61-202ENST00000594087 CC2D2BQ6DHV5 1058 aa22.78■■□□□ 1.24
CCDC61-202ENST00000594087 RTKN2Q8IZC4 609 aa22.78■■□□□ 1.24
CCDC61-202ENST00000594087 TNRC6CQ9HCJ0 1690 aaKnown RBP22.77■■□□□ 1.24
CCDC61-202ENST00000594087 C1QTNF8P60827 252 aa22.77■■□□□ 1.24
CCDC61-202ENST00000594087 HSP90B1P14625 803 aaKnown RBP22.76■■□□□ 1.23
CCDC61-202ENST00000594087 FER1L6Q2WGJ9 1857 aa22.76■■□□□ 1.23
CCDC61-202ENST00000594087 CACNA1SQ13698 1873 aa22.75■■□□□ 1.23
CCDC61-202ENST00000594087 TMX4Q9H1E5 349 aaPredicted RBP22.75■■□□□ 1.23
CCDC61-202ENST00000594087 ATP5J2-PTCD1G3V325 749 aa22.74■■□□□ 1.23
CCDC61-202ENST00000594087 SLC4A2P04920 1241 aa22.73■■□□□ 1.23
CCDC61-202ENST00000594087 FKBP4Q02790 459 aaKnown RBP eCLIP22.73■■□□□ 1.23
CCDC61-202ENST00000594087 KSR2Q6VAB6 950 aa22.73■■□□□ 1.23
CCDC61-202ENST00000594087 CCDC191Q8NCU4 936 aa22.73■■□□□ 1.23
CCDC61-202ENST00000594087 VAMP4O75379 141 aa22.72■■□□□ 1.23
CCDC61-202ENST00000594087 PRELPP51888 382 aa22.72■■□□□ 1.23
CCDC61-202ENST00000594087 EXOSC9Q06265 439 aaKnown RBP22.72■■□□□ 1.23
CCDC61-202ENST00000594087 DPY19L2Q6NUT2 758 aa22.72■■□□□ 1.23
CCDC61-202ENST00000594087 METTL22Q9BUU2 404 aaPredicted RBP22.72■■□□□ 1.23
CCDC61-202ENST00000594087 GLTPD2A6NH11 291 aa22.71■■□□□ 1.23
CCDC61-202ENST00000594087 HCLS1P14317 486 aaPredicted RBP22.71■■□□□ 1.23
CCDC61-202ENST00000594087 NEXNQ0ZGT2 675 aa22.71■■□□□ 1.23
CCDC61-202ENST00000594087 DDX46Q7L014 1031 aaKnown RBP22.71■■□□□ 1.23
CCDC61-202ENST00000594087 ZBTB38Q8NAP3 1195 aaPredicted RBP22.71■■□□□ 1.23
CCDC61-202ENST00000594087 MYD88Q99836 296 aa22.71■■□□□ 1.23
CCDC61-202ENST00000594087 ZNF521Q96K83 1311 aa22.71■■□□□ 1.23
CCDC61-202ENST00000594087 KIF3CO14782 793 aa22.7■■□□□ 1.22
CCDC61-202ENST00000594087 PPEF1O14829 653 aaPredicted RBP22.7■■□□□ 1.22
CCDC61-202ENST00000594087 BBOX1O75936 387 aa22.7■■□□□ 1.22
CCDC61-202ENST00000594087 C3orf67Q6ZVT6 689 aa22.7■■□□□ 1.22
CCDC61-202ENST00000594087 FAM89AQ96GI7 184 aa22.7■■□□□ 1.22
CCDC61-202ENST00000594087 PSMD1Q99460 953 aa22.7■■□□□ 1.22
CCDC61-202ENST00000594087 CWC25Q9NXE8 425 aaPredicted RBP22.7■■□□□ 1.22
CCDC61-202ENST00000594087 MAP3K2Q9Y2U5 619 aa22.7■■□□□ 1.22
CCDC61-202ENST00000594087 PI4KAP2A4QPH2 592 aa22.69■■□□□ 1.22
CCDC61-202ENST00000594087 SYNE4Q8N205 404 aa22.69■■□□□ 1.22
CCDC61-202ENST00000594087 PI4KAP1Q8N8J0 262 aa22.69■■□□□ 1.22
CCDC61-202ENST00000594087 SPINK5Q9NQ38 1064 aaPredicted RBP22.69■■□□□ 1.22
CCDC61-202ENST00000594087 TMC4Q7Z404 712 aa22.68■■□□□ 1.22
CCDC61-202ENST00000594087 CCDC88AQ3V6T2 1871 aa22.68■■□□□ 1.22
CCDC61-202ENST00000594087 DICER1Q9UPY3 1922 aaKnown RBP22.67■■□□□ 1.22
CCDC61-202ENST00000594087 ABCC4O15439 1325 aa22.67■■□□□ 1.22
CCDC61-202ENST00000594087 IRS4O14654 1257 aaPredicted RBP22.67■■□□□ 1.22
CCDC61-202ENST00000594087 TCERG1O14776 1098 aaKnown RBP22.67■■□□□ 1.22
CCDC61-202ENST00000594087 PCCAP05165 728 aaPredicted RBP22.67■■□□□ 1.22
CCDC61-202ENST00000594087 FLIIQ13045 1269 aa22.67■■□□□ 1.22
CCDC61-202ENST00000594087 SF3B3Q15393 1217 aaKnown RBP22.67■■□□□ 1.22
CCDC61-202ENST00000594087 NMRK2Q9NPI5 230 aa22.67■■□□□ 1.22
CCDC61-202ENST00000594087 ATP6V0A2Q9Y487 856 aa22.67■■□□□ 1.22
CCDC61-202ENST00000594087 TIAM2Q8IVF5 1701 aa22.67■■□□□ 1.22
CCDC61-202ENST00000594087 CACNA1FO60840 1977 aa22.67■■□□□ 1.22
CCDC61-202ENST00000594087 E9PSI1 815 aa22.66■■□□□ 1.22
CCDC61-202ENST00000594087 TOMM70O94826 608 aa22.66■■□□□ 1.22
CCDC61-202ENST00000594087 GRAPQ13588 217 aa22.66■■□□□ 1.22
CCDC61-202ENST00000594087 C16orf71Q8IYS4 520 aaPredicted RBP22.66■■□□□ 1.22
CCDC61-202ENST00000594087 GRAPLQ8TC17 118 aaPredicted RBP22.66■■□□□ 1.22
CCDC61-202ENST00000594087 FKBP5Q13451 457 aaPredicted RBP22.65■■□□□ 1.22
CCDC61-202ENST00000594087 OLFM4Q6UX06 510 aa22.65■■□□□ 1.22
CCDC61-202ENST00000594087 ZNF277Q9NRM2 450 aaPredicted RBP22.65■■□□□ 1.22
CCDC61-202ENST00000594087 SNED1Q8TER0 1413 aa22.65■■□□□ 1.22
CCDC61-202ENST00000594087 IARSP41252 1262 aaKnown RBP22.64■■□□□ 1.21
CCDC61-202ENST00000594087 DIEXFQ68CQ4 756 aaKnown RBP22.64■■□□□ 1.21
CCDC61-202ENST00000594087 G2E3Q7L622 706 aa22.64■■□□□ 1.21
CCDC61-202ENST00000594087 SP8Q8IXZ3 490 aa22.64■■□□□ 1.21
CCDC61-202ENST00000594087 VPS33BQ9H267 617 aa22.64■■□□□ 1.21
CCDC61-202ENST00000594087 LAMB2P55268 1798 aa22.63■■□□□ 1.21
CCDC61-202ENST00000594087 VEGFAP15692 232 aaPredicted RBP22.63■■□□□ 1.21
CCDC61-202ENST00000594087 RTL5Q5HYW3 569 aaPredicted RBP22.63■■□□□ 1.21
CCDC61-202ENST00000594087 JDP2Q8WYK2 163 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms