RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TNS4Q8IZW8 715 aa21.58■■□□□ 1.05
LIG1-205ENST00000593425 PSMD1Q99460 953 aa21.58■■□□□ 1.05
LIG1-205ENST00000593425 HACL1Q9UJ83 578 aa21.58■■□□□ 1.05
LIG1-205ENST00000593425 ANKRD36CQ5JPF3 1778 aa21.58■■□□□ 1.04
LIG1-205ENST00000593425 ERBB4Q15303 1308 aa21.57■■□□□ 1.04
LIG1-205ENST00000593425 HOXA10P31260 410 aaPredicted RBP21.57■■□□□ 1.04
LIG1-205ENST00000593425 GIGYF2Q6Y7W6 1299 aaKnown RBP21.57■■□□□ 1.04
LIG1-205ENST00000593425 LRP10Q7Z4F1 713 aa21.57■■□□□ 1.04
LIG1-205ENST00000593425 RPGRQ92834 1020 aaKnown RBP21.57■■□□□ 1.04
LIG1-205ENST00000593425 PNNQ9H307 717 aaKnown RBP21.57■■□□□ 1.04
LIG1-205ENST00000593425 TSPYL4Q9UJ04 414 aa21.57■■□□□ 1.04
LIG1-205ENST00000593425 ITGBL1O95965 494 aaPredicted RBP21.56■■□□□ 1.04
LIG1-205ENST00000593425 EPHX2P34913 555 aa21.56■■□□□ 1.04
LIG1-205ENST00000593425 C3orf67Q6ZVT6 689 aa21.56■■□□□ 1.04
LIG1-205ENST00000593425 CNTNAP1P78357 1384 aa21.56■■□□□ 1.04
LIG1-205ENST00000593425 LAMB2P55268 1798 aa21.56■■□□□ 1.04
LIG1-205ENST00000593425 CAPN15O75808 1086 aa21.55■■□□□ 1.04
LIG1-205ENST00000593425 PDIA6Q15084 440 aa21.55■■□□□ 1.04
LIG1-205ENST00000593425 ANXA1P04083 346 aa21.54■■□□□ 1.04
LIG1-205ENST00000593425 RIPK4P57078 832 aa21.54■■□□□ 1.04
LIG1-205ENST00000593425 PROSER3Q2NL68 480 aa21.54■■□□□ 1.04
LIG1-205ENST00000593425 CC2D2BQ6DHV5 1058 aa21.54■■□□□ 1.04
LIG1-205ENST00000593425 GPC2Q8N158 579 aa21.54■■□□□ 1.04
LIG1-205ENST00000593425 JDP2Q8WYK2 163 aa21.54■■□□□ 1.04
LIG1-205ENST00000593425 CLEC11AQ9Y240 323 aa21.54■■□□□ 1.04
LIG1-205ENST00000593425 PPEF1O14829 653 aaPredicted RBP21.53■■□□□ 1.04
LIG1-205ENST00000593425 EIF2S2P20042 333 aaKnown RBP21.53■■□□□ 1.04
LIG1-205ENST00000593425 CRAMP1Q96RY5 1269 aa21.53■■□□□ 1.04
LIG1-205ENST00000593425 TCERG1O14776 1098 aaKnown RBP21.52■■□□□ 1.04
LIG1-205ENST00000593425 RBM17Q96I25 401 aaKnown RBP21.52■■□□□ 1.04
LIG1-205ENST00000593425 TMEM88BA6NKF7 163 aa21.51■■□□□ 1.03
LIG1-205ENST00000593425 EIF6P56537 245 aaKnown RBP21.51■■□□□ 1.03
LIG1-205ENST00000593425 PARP10Q53GL7 1025 aa21.51■■□□□ 1.03
LIG1-205ENST00000593425 MAP1SQ66K74 1059 aaPredicted RBP21.51■■□□□ 1.03
LIG1-205ENST00000593425 PPP1R42Q7Z4L9 355 aa21.51■■□□□ 1.03
LIG1-205ENST00000593425 PNMA8AQ86V59 439 aaPredicted RBP21.51■■□□□ 1.03
LIG1-205ENST00000593425 GJA3Q9Y6H8 435 aa21.51■■□□□ 1.03
LIG1-205ENST00000593425 TMPOP42166 694 aaKnown RBP21.5■■□□□ 1.03
LIG1-205ENST00000593425 CNTROBQ8N137 903 aa21.49■■□□□ 1.03
LIG1-205ENST00000593425 LARGE2Q8N3Y3 721 aa21.49■■□□□ 1.03
LIG1-205ENST00000593425 NECTIN2Q92692 538 aa21.49■■□□□ 1.03
LIG1-205ENST00000593425 VEGFBP49765 207 aa21.48■■□□□ 1.03
LIG1-205ENST00000593425 SCNN1DP51172 638 aa21.48■■□□□ 1.03
LIG1-205ENST00000593425 RALBP1Q15311 655 aa21.48■■□□□ 1.03
LIG1-205ENST00000593425 GRIPAP1Q4V328 841 aa21.48■■□□□ 1.03
LIG1-205ENST00000593425 NLRP3Q96P20 1036 aa21.48■■□□□ 1.03
LIG1-205ENST00000593425 UTP14AQ9BVJ6 771 aaKnown RBP21.48■■□□□ 1.03
LIG1-205ENST00000593425 BABAM1Q9NWV8 329 aa21.48■■□□□ 1.03
LIG1-205ENST00000593425 ABCC4O15439 1325 aa21.48■■□□□ 1.03
LIG1-205ENST00000593425 FOXN1O15353 648 aa21.47■■□□□ 1.03
LIG1-205ENST00000593425 SLC10A5Q5PT55 438 aa21.47■■□□□ 1.03
LIG1-205ENST00000593425 LMOD3Q0VAK6 560 aa21.46■■□□□ 1.03
LIG1-205ENST00000593425 KRT24Q2M2I5 525 aa21.46■■□□□ 1.03
LIG1-205ENST00000593425 COPS6Q7L5N1 327 aa21.46■■□□□ 1.03
LIG1-205ENST00000593425 CCDC146Q8IYE0 955 aa21.46■■□□□ 1.03
LIG1-205ENST00000593425 ATP6V0A2Q9Y487 856 aa21.46■■□□□ 1.03
LIG1-205ENST00000593425 TAF1P21675 1872 aa21.45■■□□□ 1.02
LIG1-205ENST00000593425 PPIP5K2O43314 1243 aa21.45■■□□□ 1.02
LIG1-205ENST00000593425 LMOD1P29536 600 aaPredicted RBP21.45■■□□□ 1.02
LIG1-205ENST00000593425 EPS15P42566 896 aa21.45■■□□□ 1.02
LIG1-205ENST00000593425 AIMP1Q12904 312 aaKnown RBP21.45■■□□□ 1.02
LIG1-205ENST00000593425 AOC3Q16853 763 aa21.45■■□□□ 1.02
LIG1-205ENST00000593425 NLRP10Q86W26 655 aa21.45■■□□□ 1.02
LIG1-205ENST00000593425 NIM1KQ8IY84 436 aa21.45■■□□□ 1.02
LIG1-205ENST00000593425 XAGE3Q8WTP9 111 aa21.45■■□□□ 1.02
LIG1-205ENST00000593425 DDX60Q8IY21 1712 aaKnown RBP21.44■■□□□ 1.02
LIG1-205ENST00000593425 NEUROD2Q15784 382 aa21.44■■□□□ 1.02
LIG1-205ENST00000593425 RASSF10A6NK89 507 aa21.43■■□□□ 1.02
LIG1-205ENST00000593425 FMR1Q06787 632 aaKnown RBP eCLIP21.43■■□□□ 1.02
LIG1-205ENST00000593425 HSP90AB3PQ58FF7 597 aa21.43■■□□□ 1.02
LIG1-205ENST00000593425 HCLS1P14317 486 aaPredicted RBP21.42■■□□□ 1.02
LIG1-205ENST00000593425 TRPM7Q96QT4 1865 aa21.42■■□□□ 1.02
LIG1-205ENST00000593425 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
LIG1-205ENST00000593425 LRRC37AA6NMS7 1700 aa21.41■■□□□ 1.02
LIG1-205ENST00000593425 THSD7BQ9C0I4 1608 aa21.41■■□□□ 1.02
LIG1-205ENST00000593425 DUOX1Q9NRD9 1551 aa21.41■■□□□ 1.02
LIG1-205ENST00000593425 CHL1O00533 1208 aa21.41■■□□□ 1.02
LIG1-205ENST00000593425 TCIRG1Q13488 830 aa21.41■■□□□ 1.02
LIG1-205ENST00000593425 DEFB115Q30KQ5 88 aa21.41■■□□□ 1.02
LIG1-205ENST00000593425 ZNF428Q96B54 188 aa21.41■■□□□ 1.02
LIG1-205ENST00000593425 RTFDC1Q9BY42 306 aaPredicted RBP21.41■■□□□ 1.02
LIG1-205ENST00000593425 DDX21Q9NR30 783 aaKnown RBP eCLIP21.41■■□□□ 1.02
LIG1-205ENST00000593425 TRIM35Q9UPQ4 493 aa21.41■■□□□ 1.02
LIG1-205ENST00000593425 TMX4Q9H1E5 349 aaPredicted RBP21.4■■□□□ 1.02
LIG1-205ENST00000593425 CHPF2Q9P2E5 772 aa21.4■■□□□ 1.02
LIG1-205ENST00000593425 TRMT112Q9UI30 125 aaKnown RBP21.4■■□□□ 1.02
LIG1-205ENST00000593425 ABT1Q9ULW3 272 aaKnown RBP21.4■■□□□ 1.02
LIG1-205ENST00000593425 LAS1LQ9Y4W2 734 aaKnown RBP21.4■■□□□ 1.02
LIG1-205ENST00000593425 CXCL9Q07325 125 aa21.39■■□□□ 1.01
LIG1-205ENST00000593425 DDX10Q13206 875 aaKnown RBP21.39■■□□□ 1.01
LIG1-205ENST00000593425 USP50Q70EL3 339 aaPredicted RBP21.39■■□□□ 1.01
LIG1-205ENST00000593425 SP8Q8IXZ3 490 aa21.39■■□□□ 1.01
LIG1-205ENST00000593425 SUPT20HQ8NEM7 779 aa21.39■■□□□ 1.01
LIG1-205ENST00000593425 AIDAQ96BJ3 306 aa21.39■■□□□ 1.01
LIG1-205ENST00000593425 VPS33BQ9H267 617 aa21.39■■□□□ 1.01
LIG1-205ENST00000593425 WBP1LQ9NX94 342 aa21.39■■□□□ 1.01
LIG1-205ENST00000593425 COL4A1P02462 1669 aa21.38■■□□□ 1.01
LIG1-205ENST00000593425 SH3TC1Q8TE82 1336 aa21.38■■□□□ 1.01
LIG1-205ENST00000593425 BBOX1O75936 387 aa21.38■■□□□ 1.01
LIG1-205ENST00000593425 CTCFP49711 727 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms