RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 CYP2E1P05181 493 aaPredicted RBP4.13□□□□□ -1.75
VMP1-216ENST00000592790 TUBBP07437 444 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 XBP1P17861 261 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 AKAP17AQ02040 695 aaKnown RBP4.13□□□□□ -1.75
VMP1-216ENST00000592790 LARP1Q6PKG0 1096 aaKnown RBP4.13□□□□□ -1.75
VMP1-216ENST00000592790 WASF1Q92558 559 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 CCDC47Q96A33 483 aaKnown RBP4.13□□□□□ -1.75
VMP1-216ENST00000592790 ERO1AQ96HE7 468 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 PHACTR3Q96KR7 559 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 IL1RAPL2Q9NP60 686 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 IMPACTQ9P2X3 320 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 NEXMIFQ5QGS0 1516 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 SGSM2O43147 1006 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 SLU7O95391 586 aaKnown RBP4.13□□□□□ -1.75
VMP1-216ENST00000592790 SYT1P21579 422 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 EIF4A2Q14240 407 aaKnown RBP4.13□□□□□ -1.75
VMP1-216ENST00000592790 RUFY3Q7L099 469 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 PPP1R42Q7Z4L9 355 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 TICAM2Q86XR7 235 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 NUTM1Q86Y26 1132 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 GPT2Q8TD30 523 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 LLPHQ9BRT6 129 aaKnown RBP4.13□□□□□ -1.75
VMP1-216ENST00000592790 FAM107BQ9H098 131 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 DLC1Q96QB1 1528 aa4.13□□□□□ -1.75
VMP1-216ENST00000592790 SBNO1A3KN83 1393 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 CDC25BP30305 580 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 MMP14P50281 582 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 DCTN1Q14203 1278 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 TXLNBQ8N3L3 684 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 LTV1Q96GA3 475 aaPredicted RBP4.12□□□□□ -1.75
VMP1-216ENST00000592790 TIGD1Q96MW7 591 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 V9GYY5 206 aaPredicted RBP4.12□□□□□ -1.75
VMP1-216ENST00000592790 LRRC7Q96NW7 1537 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 PPLO60437 1756 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 MAP3K5Q99683 1374 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 SERPINC1P01008 464 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 AK2P54819 239 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 SNW1Q13573 536 aaKnown RBP4.12□□□□□ -1.75
VMP1-216ENST00000592790 GIMAP6Q6P9H5 292 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 C16orf71Q8IYS4 520 aaPredicted RBP4.12□□□□□ -1.75
VMP1-216ENST00000592790 KCNG4Q8TDN1 519 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 NECTIN2Q92692 538 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.12□□□□□ -1.75
VMP1-216ENST00000592790 TULP4Q9NRJ4 1543 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 RAPGEF3O95398 923 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 DMTNQ08495 405 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 TUBB2AQ13885 445 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 SART3Q15020 963 aaKnown RBP4.12□□□□□ -1.75
VMP1-216ENST00000592790 ANO6Q4KMQ2 910 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 IQCEQ6IPM2 695 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 WAPLQ7Z5K2 1190 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 C16orf45Q96MC5 204 aaPredicted RBP4.12□□□□□ -1.75
VMP1-216ENST00000592790 TUBB2BQ9BVA1 445 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 CLSTN2Q9H4D0 955 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 CAMSAP1Q5T5Y3 1602 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 SHPRHQ149N8 1683 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 ERICH2A1L162 156 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 FAM83GA6ND36 823 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 BTBD11A6QL63 1104 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 F6X3S4 739 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 USP8P40818 1118 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 CCDC186Q7Z3E2 898 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 FMNL2Q96PY5 1086 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 TTC12Q9H892 705 aaPredicted RBP4.12□□□□□ -1.75
VMP1-216ENST00000592790 GDPD2Q9HCC8 539 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 BRMS1Q9HCU9 246 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 CEP131Q9UPN4 1083 aa4.12□□□□□ -1.75
VMP1-216ENST00000592790 GTF2F1P35269 517 aaKnown RBP eCLIP4.11□□□□□ -1.75
VMP1-216ENST00000592790 DNM1Q05193 864 aaKnown RBP4.11□□□□□ -1.75
VMP1-216ENST00000592790 THEMISQ8N1K5 641 aaPredicted RBP4.11□□□□□ -1.75
VMP1-216ENST00000592790 ABTB2Q8N961 1025 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 SSH3Q8TE77 659 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 ANKRD24Q8TF21 1146 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 RAPGEF4Q8WZA2 1011 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 NEK1Q96PY6 1258 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 DNAJC2Q99543 621 aaKnown RBP4.11□□□□□ -1.75
VMP1-216ENST00000592790 SNX14Q9Y5W7 946 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 CDC42BPGQ6DT37 1551 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 ACEP12821 1306 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 ADGRB1O14514 1584 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 SKILP12757 684 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 PSME1Q06323 249 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 IMMTQ16891 758 aaKnown RBP4.11□□□□□ -1.75
VMP1-216ENST00000592790 MAP9Q49MG5 647 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 CCDC158Q5M9N0 1113 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 KANK3Q6NY19 840 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 ZNF530Q6P9A1 599 aaPredicted RBP4.11□□□□□ -1.75
VMP1-216ENST00000592790 PPFIBP1Q86W92 1011 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 KIF2CQ99661 725 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 PYM1Q9BRP8 204 aaKnown RBP4.11□□□□□ -1.75
VMP1-216ENST00000592790 SPTLC3Q9NUV7 552 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 DACT1Q9NYF0 836 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 ANKRD26Q9UPS8 1709 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 RBM8AQ9Y5S9 174 aaKnown RBP4.11□□□□□ -1.75
VMP1-216ENST00000592790 KIF20BQ96Q89 1820 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 ERBB4Q15303 1308 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 GTF2E1P29083 439 aaPredicted RBP4.11□□□□□ -1.75
VMP1-216ENST00000592790 ZNF75DP51815 510 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 CAMK4Q16566 473 aa4.11□□□□□ -1.75
VMP1-216ENST00000592790 GRIPAP1Q4V328 841 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms