RNA–Protein interactions for RNA: ENST00000591648.1

TPGS2-216, Transcript of tubulin polyglutamylase complex subunit 2, human

TSL 2

Gene TPGS2, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPGS2-216	ENST00000591648	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.49	■■■□□ 2.95
TPGS2-216	ENST00000591648	ALDH1B1	P30837	517 aa		33.48	■■■□□ 2.95
TPGS2-216	ENST00000591648	CALD1	Q05682	793 aa	Known RBP	33.48	■■■□□ 2.95
TPGS2-216	ENST00000591648	RPGR	Q92834	1020 aa	Known RBP	33.48	■■■□□ 2.95
TPGS2-216	ENST00000591648	UTP14A	Q9BVJ6	771 aa	Known RBP	33.48	■■■□□ 2.95
TPGS2-216	ENST00000591648	GLTPD2	A6NH11	291 aa		33.47	■■■□□ 2.95
TPGS2-216	ENST00000591648	SLC51A	Q86UW1	340 aa		33.47	■■■□□ 2.95
TPGS2-216	ENST00000591648	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.47	■■■□□ 2.95
TPGS2-216	ENST00000591648	DBF4	Q9UBU7	674 aa	Predicted RBP	33.47	■■■□□ 2.95
TPGS2-216	ENST00000591648	LTBP3	Q9NS15	1303 aa		33.47	■■■□□ 2.95
TPGS2-216	ENST00000591648	SYNE4	Q8N205	404 aa		33.46	■■■□□ 2.95
TPGS2-216	ENST00000591648	HSPA6	P17066	643 aa		33.45	■■■□□ 2.95
TPGS2-216	ENST00000591648	TCIRG1	Q13488	830 aa		33.45	■■■□□ 2.95
TPGS2-216	ENST00000591648	NLRP10	Q86W26	655 aa		33.45	■■■□□ 2.95
TPGS2-216	ENST00000591648	C8orf58	Q8NAV2	365 aa		33.45	■■■□□ 2.95
TPGS2-216	ENST00000591648	TCERG1	O14776	1098 aa	Known RBP	33.44	■■■□□ 2.94
TPGS2-216	ENST00000591648	HSP90AB3P	Q58FF7	597 aa		33.44	■■■□□ 2.94
TPGS2-216	ENST00000591648	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.44	■■■□□ 2.94
TPGS2-216	ENST00000591648	RIC1	Q4ADV7	1423 aa		33.44	■■■□□ 2.94
TPGS2-216	ENST00000591648	TSR2	Q969E8	191 aa	Known RBP	33.43	■■■□□ 2.94
TPGS2-216	ENST00000591648	ANKRD13D	Q6ZTN6	518 aa		33.42	■■■□□ 2.94
TPGS2-216	ENST00000591648	HCLS1	P14317	486 aa	Predicted RBP	33.41	■■■□□ 2.94
TPGS2-216	ENST00000591648	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.41	■■■□□ 2.94
TPGS2-216	ENST00000591648	PLBD2	Q8NHP8	589 aa		33.41	■■■□□ 2.94
TPGS2-216	ENST00000591648	HYPK	Q9NX55	129 aa		33.41	■■■□□ 2.94
TPGS2-216	ENST00000591648	TRMT112	Q9UI30	125 aa	Known RBP	33.41	■■■□□ 2.94
TPGS2-216	ENST00000591648	ANKRD36C	Q5JPF3	1778 aa		33.4	■■■□□ 2.94
TPGS2-216	ENST00000591648	RBM17	Q96I25	401 aa	Known RBP	33.4	■■■□□ 2.94
TPGS2-216	ENST00000591648	NLRP3	Q96P20	1036 aa		33.4	■■■□□ 2.94
TPGS2-216	ENST00000591648	SALL2	Q9Y467	1007 aa	Predicted RBP	33.4	■■■□□ 2.94
TPGS2-216	ENST00000591648	ATP5J2-PTCD1	G3V325	749 aa		33.39	■■■□□ 2.94
TPGS2-216	ENST00000591648	HOXA10	P31260	410 aa	Predicted RBP	33.39	■■■□□ 2.94
TPGS2-216	ENST00000591648	TSPYL6	Q8N831	410 aa		33.39	■■■□□ 2.94
TPGS2-216	ENST00000591648	RBM46	Q8TBY0	533 aa	Known RBP	33.39	■■■□□ 2.94
TPGS2-216	ENST00000591648	PHAX	Q9H814	394 aa	Known RBP	33.39	■■■□□ 2.94
TPGS2-216	ENST00000591648	DPY19L2	Q6NUT2	758 aa		33.38	■■■□□ 2.93
TPGS2-216	ENST00000591648	WWC1	Q8IX03	1113 aa		33.38	■■■□□ 2.93
TPGS2-216	ENST00000591648	RTKN2	Q8IZC4	609 aa		33.38	■■■□□ 2.93
TPGS2-216	ENST00000591648	SLC10A5	Q5PT55	438 aa		33.37	■■■□□ 2.93
TPGS2-216	ENST00000591648	DICER1	Q9UPY3	1922 aa	Known RBP	33.36	■■■□□ 2.93
TPGS2-216	ENST00000591648	DDN	O94850	711 aa	Predicted RBP	33.36	■■■□□ 2.93
TPGS2-216	ENST00000591648	PPEF1	O14829	653 aa	Predicted RBP	33.35	■■■□□ 2.93
TPGS2-216	ENST00000591648	VEGFA	P15692	232 aa	Predicted RBP	33.35	■■■□□ 2.93
TPGS2-216	ENST00000591648	CRAMP1	Q96RY5	1269 aa		33.35	■■■□□ 2.93
TPGS2-216	ENST00000591648	POTEC	B2RU33	542 aa		33.34	■■■□□ 2.93
TPGS2-216	ENST00000591648	CCDC27	Q2M243	656 aa		33.34	■■■□□ 2.93
TPGS2-216	ENST00000591648	SH3TC1	Q8TE82	1336 aa		33.33	■■■□□ 2.93
TPGS2-216	ENST00000591648	RTL5	Q5HYW3	569 aa	Predicted RBP	33.33	■■■□□ 2.93
TPGS2-216	ENST00000591648	ISCA1	Q9BUE6	129 aa		33.33	■■■□□ 2.93
TPGS2-216	ENST00000591648	ABCC4	O15439	1325 aa		33.32	■■■□□ 2.93
TPGS2-216	ENST00000591648	RNF123	Q5XPI4	1314 aa		33.32	■■■□□ 2.93
TPGS2-216	ENST00000591648	RIC3	Q7Z5B4	369 aa		33.32	■■■□□ 2.92
TPGS2-216	ENST00000591648	SNED1	Q8TER0	1413 aa		33.32	■■■□□ 2.92
TPGS2-216	ENST00000591648	IARS	P41252	1262 aa	Known RBP	33.31	■■■□□ 2.92
TPGS2-216	ENST00000591648	FAM89A	Q96GI7	184 aa		33.31	■■■□□ 2.92
TPGS2-216	ENST00000591648	GOLGA2	Q08379	1002 aa		33.3	■■■□□ 2.92
TPGS2-216	ENST00000591648	FAM9B	Q8IZU0	186 aa		33.3	■■■□□ 2.92
TPGS2-216	ENST00000591648	ZNF541	Q9H0D2	1346 aa		33.29	■■■□□ 2.92
TPGS2-216	ENST00000591648	CCDC30	Q5VVM6	783 aa		33.28	■■■□□ 2.92
TPGS2-216	ENST00000591648	PSMD1	Q99460	953 aa		33.28	■■■□□ 2.92
TPGS2-216	ENST00000591648	WDR90	Q96KV7	1748 aa		33.28	■■■□□ 2.92
TPGS2-216	ENST00000591648	LAMB2	P55268	1798 aa		33.27	■■■□□ 2.92
TPGS2-216	ENST00000591648	FSTL1	Q12841	308 aa		33.27	■■■□□ 2.92
TPGS2-216	ENST00000591648	CC2D2B	Q6DHV5	1058 aa		33.27	■■■□□ 2.92
TPGS2-216	ENST00000591648	MYD88	Q99836	296 aa		33.27	■■■□□ 2.92
TPGS2-216	ENST00000591648	HTRA3	P83110	453 aa		33.26	■■■□□ 2.91
TPGS2-216	ENST00000591648	APLP1	P51693	650 aa		33.25	■■■□□ 2.91
TPGS2-216	ENST00000591648	SMC1B	Q8NDV3	1235 aa		33.25	■■■□□ 2.91
TPGS2-216	ENST00000591648	DDX46	Q7L014	1031 aa	Known RBP	33.24	■■■□□ 2.91
TPGS2-216	ENST00000591648	COL4A5	P29400	1685 aa		33.23	■■■□□ 2.91
TPGS2-216	ENST00000591648	TWISTNB	Q3B726	338 aa	Predicted RBP	33.23	■■■□□ 2.91
TPGS2-216	ENST00000591648	ATP6V0A2	Q9Y487	856 aa		33.23	■■■□□ 2.91
TPGS2-216	ENST00000591648	IL16	Q14005	1332 aa		33.22	■■■□□ 2.91
TPGS2-216	ENST00000591648	POTEI	P0CG38	1075 aa		33.21	■■■□□ 2.91
TPGS2-216	ENST00000591648	POTEJ	P0CG39	1038 aa		33.21	■■■□□ 2.91
TPGS2-216	ENST00000591648	JARID2	Q92833	1246 aa	Predicted RBP	33.21	■■■□□ 2.91
TPGS2-216	ENST00000591648	DDX60	Q8IY21	1712 aa	Known RBP	33.21	■■■□□ 2.91
TPGS2-216	ENST00000591648	FANCI	Q9NVI1	1328 aa		33.21	■■■□□ 2.91
TPGS2-216	ENST00000591648	TRIM28	Q13263	835 aa	Known RBP	33.2	■■■□□ 2.91
TPGS2-216	ENST00000591648	LARGE2	Q8N3Y3	721 aa		33.2	■■■□□ 2.91
TPGS2-216	ENST00000591648	JDP2	Q8WYK2	163 aa		33.2	■■■□□ 2.91
TPGS2-216	ENST00000591648	TMX4	Q9H1E5	349 aa	Predicted RBP	33.2	■■■□□ 2.91
TPGS2-216	ENST00000591648	FZD9	O00144	591 aa		33.19	■■■□□ 2.9
TPGS2-216	ENST00000591648	IRS4	O14654	1257 aa	Predicted RBP	33.19	■■■□□ 2.9
TPGS2-216	ENST00000591648	GRAP	Q13588	217 aa		33.19	■■■□□ 2.9
TPGS2-216	ENST00000591648	GRAPL	Q8TC17	118 aa	Predicted RBP	33.19	■■■□□ 2.9
TPGS2-216	ENST00000591648	TAF1	P21675	1872 aa		33.18	■■■□□ 2.9
TPGS2-216	ENST00000591648	BBOX1	O75936	387 aa		33.18	■■■□□ 2.9
TPGS2-216	ENST00000591648	G2E3	Q7L622	706 aa		33.18	■■■□□ 2.9
TPGS2-216	ENST00000591648	STK31	Q9BXU1	1019 aa		33.18	■■■□□ 2.9
TPGS2-216	ENST00000591648	MAP3K2	Q9Y2U5	619 aa		33.18	■■■□□ 2.9
TPGS2-216	ENST00000591648	DDX58	O95786	925 aa	Known RBP	33.17	■■■□□ 2.9
TPGS2-216	ENST00000591648	GRIPAP1	Q4V328	841 aa		33.17	■■■□□ 2.9
TPGS2-216	ENST00000591648	NCBP3	Q53F19	620 aa	Known RBP	33.17	■■■□□ 2.9
TPGS2-216	ENST00000591648	METTL22	Q9BUU2	404 aa	Predicted RBP	33.17	■■■□□ 2.9
TPGS2-216	ENST00000591648	AOC3	Q16853	763 aa		33.16	■■■□□ 2.9
TPGS2-216	ENST00000591648	SP8	Q8IXZ3	490 aa		33.16	■■■□□ 2.9
TPGS2-216	ENST00000591648	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.16	■■■□□ 2.9
TPGS2-216	ENST00000591648	CHMP4A	Q9BY43	222 aa		33.16	■■■□□ 2.9
TPGS2-216	ENST00000591648	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.16	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms