RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 EPHX2P34913 555 aa29.72■■■□□ 2.35
CXXC1-216ENST00000591474 EAPPQ56P03 285 aaPredicted RBP29.72■■■□□ 2.35
CXXC1-216ENST00000591474 ITGBL1O95965 494 aaPredicted RBP29.71■■■□□ 2.35
CXXC1-216ENST00000591474 SUSD4Q5VX71 490 aa29.71■■■□□ 2.35
CXXC1-216ENST00000591474 ZNF34Q8IZ26 560 aa29.71■■■□□ 2.35
CXXC1-216ENST00000591474 GPC2Q8N158 579 aa29.71■■■□□ 2.35
CXXC1-216ENST00000591474 RPGRQ92834 1020 aaKnown RBP29.71■■■□□ 2.35
CXXC1-216ENST00000591474 RNF123Q5XPI4 1314 aa29.71■■■□□ 2.35
CXXC1-216ENST00000591474 GRIPAP1Q4V328 841 aa29.7■■■□□ 2.35
CXXC1-216ENST00000591474 GIGYF2Q6Y7W6 1299 aaKnown RBP29.7■■■□□ 2.35
CXXC1-216ENST00000591474 PNMA8AQ86V59 439 aaPredicted RBP29.7■■■□□ 2.35
CXXC1-216ENST00000591474 JDP2Q8WYK2 163 aa29.7■■■□□ 2.35
CXXC1-216ENST00000591474 NTSR2O95665 410 aa29.69■■■□□ 2.34
CXXC1-216ENST00000591474 COL4A5P29400 1685 aa29.69■■■□□ 2.34
CXXC1-216ENST00000591474 TMEM88BA6NKF7 163 aa29.68■■■□□ 2.34
CXXC1-216ENST00000591474 CRAMP1Q96RY5 1269 aa29.68■■■□□ 2.34
CXXC1-216ENST00000591474 TSPYL4Q9UJ04 414 aa29.68■■■□□ 2.34
CXXC1-216ENST00000591474 LRP10Q7Z4F1 713 aa29.67■■■□□ 2.34
CXXC1-216ENST00000591474 RBM17Q96I25 401 aaKnown RBP29.67■■■□□ 2.34
CXXC1-216ENST00000591474 CLEC11AQ9Y240 323 aa29.67■■■□□ 2.34
CXXC1-216ENST00000591474 PARP10Q53GL7 1025 aa29.66■■■□□ 2.34
CXXC1-216ENST00000591474 PPP1R42Q7Z4L9 355 aa29.66■■■□□ 2.34
CXXC1-216ENST00000591474 CAPN15O75808 1086 aa29.65■■■□□ 2.34
CXXC1-216ENST00000591474 EIF6P56537 245 aaKnown RBP29.65■■■□□ 2.34
CXXC1-216ENST00000591474 PPEF1O14829 653 aaPredicted RBP29.64■■■□□ 2.34
CXXC1-216ENST00000591474 PDIA6Q15084 440 aa29.64■■■□□ 2.34
CXXC1-216ENST00000591474 BABAM1Q9NWV8 329 aa29.64■■■□□ 2.34
CXXC1-216ENST00000591474 LTBP1Q14766 1721 aa29.63■■■□□ 2.33
CXXC1-216ENST00000591474 CNTROBQ8N137 903 aa29.63■■■□□ 2.33
CXXC1-216ENST00000591474 C3orf67Q6ZVT6 689 aa29.62■■■□□ 2.33
CXXC1-216ENST00000591474 VEGFBP49765 207 aa29.61■■■□□ 2.33
CXXC1-216ENST00000591474 RIPK4P57078 832 aa29.61■■■□□ 2.33
CXXC1-216ENST00000591474 MAP1SQ66K74 1059 aaPredicted RBP29.61■■■□□ 2.33
CXXC1-216ENST00000591474 LARGE2Q8N3Y3 721 aa29.61■■■□□ 2.33
CXXC1-216ENST00000591474 NLRP3Q96P20 1036 aa29.61■■■□□ 2.33
CXXC1-216ENST00000591474 EIF2S2P20042 333 aaKnown RBP29.6■■■□□ 2.33
CXXC1-216ENST00000591474 SLC51AQ86UW1 340 aa29.6■■■□□ 2.33
CXXC1-216ENST00000591474 GJA3Q9Y6H8 435 aa29.6■■■□□ 2.33
CXXC1-216ENST00000591474 ANKRD36CQ5JPF3 1778 aa29.59■■■□□ 2.33
CXXC1-216ENST00000591474 FOXN1O15353 648 aa29.59■■■□□ 2.33
CXXC1-216ENST00000591474 LMOD1P29536 600 aaPredicted RBP29.59■■■□□ 2.33
CXXC1-216ENST00000591474 SLC10A5Q5PT55 438 aa29.59■■■□□ 2.33
CXXC1-216ENST00000591474 UTP14AQ9BVJ6 771 aaKnown RBP29.59■■■□□ 2.33
CXXC1-216ENST00000591474 SCNN1DP51172 638 aa29.58■■■□□ 2.33
CXXC1-216ENST00000591474 LMOD3Q0VAK6 560 aa29.58■■■□□ 2.33
CXXC1-216ENST00000591474 RALBP1Q15311 655 aa29.58■■■□□ 2.33
CXXC1-216ENST00000591474 PROSER3Q2NL68 480 aa29.58■■■□□ 2.33
CXXC1-216ENST00000591474 RASSF10A6NK89 507 aa29.57■■■□□ 2.32
CXXC1-216ENST00000591474 TMPOP42166 694 aaKnown RBP29.57■■■□□ 2.32
CXXC1-216ENST00000591474 TCERG1O14776 1098 aaKnown RBP29.56■■■□□ 2.32
CXXC1-216ENST00000591474 VPS33BQ9H267 617 aa29.56■■■□□ 2.32
CXXC1-216ENST00000591474 ATP6V0A2Q9Y487 856 aa29.56■■■□□ 2.32
CXXC1-216ENST00000591474 LAMB2P55268 1798 aa29.55■■■□□ 2.32
CXXC1-216ENST00000591474 ANXA1P04083 346 aa29.55■■■□□ 2.32
CXXC1-216ENST00000591474 NIM1KQ8IY84 436 aa29.55■■■□□ 2.32
CXXC1-216ENST00000591474 TMX4Q9H1E5 349 aaPredicted RBP29.55■■■□□ 2.32
CXXC1-216ENST00000591474 PRDM10Q9NQV6 1147 aa29.55■■■□□ 2.32
CXXC1-216ENST00000591474 ABCC4O15439 1325 aa29.54■■■□□ 2.32
CXXC1-216ENST00000591474 HSP90AB3PQ58FF7 597 aa29.54■■■□□ 2.32
CXXC1-216ENST00000591474 AIDAQ96BJ3 306 aa29.54■■■□□ 2.32
CXXC1-216ENST00000591474 PPIP5K2O43314 1243 aa29.53■■■□□ 2.32
CXXC1-216ENST00000591474 EPS15P42566 896 aa29.53■■■□□ 2.32
CXXC1-216ENST00000591474 DEFB115Q30KQ5 88 aa29.53■■■□□ 2.32
CXXC1-216ENST00000591474 DDX21Q9NR30 783 aaKnown RBP eCLIP29.53■■■□□ 2.32
CXXC1-216ENST00000591474 CTCFP49711 727 aaPredicted RBP29.52■■■□□ 2.32
CXXC1-216ENST00000591474 AOC3Q16853 763 aa29.52■■■□□ 2.32
CXXC1-216ENST00000591474 USP50Q70EL3 339 aaPredicted RBP29.52■■■□□ 2.32
CXXC1-216ENST00000591474 WBP1LQ9NX94 342 aa29.52■■■□□ 2.32
CXXC1-216ENST00000591474 COPS6Q7L5N1 327 aa29.51■■■□□ 2.31
CXXC1-216ENST00000591474 NLRP10Q86W26 655 aa29.51■■■□□ 2.31
CXXC1-216ENST00000591474 RTFDC1Q9BY42 306 aaPredicted RBP29.51■■■□□ 2.31
CXXC1-216ENST00000591474 SUPT20HQ8NEM7 779 aa29.5■■■□□ 2.31
CXXC1-216ENST00000591474 XAGE3Q8WTP9 111 aa29.5■■■□□ 2.31
CXXC1-216ENST00000591474 BBOX1O75936 387 aa29.49■■■□□ 2.31
CXXC1-216ENST00000591474 ABT1Q9ULW3 272 aaKnown RBP29.49■■■□□ 2.31
CXXC1-216ENST00000591474 TRPM7Q96QT4 1865 aa29.48■■■□□ 2.31
CXXC1-216ENST00000591474 AIMP1Q12904 312 aaKnown RBP29.48■■■□□ 2.31
CXXC1-216ENST00000591474 TCIRG1Q13488 830 aa29.48■■■□□ 2.31
CXXC1-216ENST00000591474 SP8Q8IXZ3 490 aa29.48■■■□□ 2.31
CXXC1-216ENST00000591474 NECTIN2Q92692 538 aa29.48■■■□□ 2.31
CXXC1-216ENST00000591474 WDR33Q9C0J8 1336 aaKnown RBP29.47■■■□□ 2.31
CXXC1-216ENST00000591474 CHL1O00533 1208 aa29.47■■■□□ 2.31
CXXC1-216ENST00000591474 GPRC5DQ9NZD1 345 aa29.47■■■□□ 2.31
CXXC1-216ENST00000591474 ZNRF3Q9ULT6 936 aa29.47■■■□□ 2.31
CXXC1-216ENST00000591474 THSD7BQ9C0I4 1608 aa29.46■■■□□ 2.31
CXXC1-216ENST00000591474 HCLS1P14317 486 aaPredicted RBP29.46■■■□□ 2.31
CXXC1-216ENST00000591474 ADARB2Q9NS39 739 aaKnown RBP29.46■■■□□ 2.31
CXXC1-216ENST00000591474 SH3TC1Q8TE82 1336 aa29.45■■■□□ 2.31
CXXC1-216ENST00000591474 MYBBP1AQ9BQG0 1328 aaKnown RBP29.45■■■□□ 2.31
CXXC1-216ENST00000591474 DPP8Q6V1X1 898 aaPredicted RBP29.45■■■□□ 2.31
CXXC1-216ENST00000591474 TRMT112Q9UI30 125 aaKnown RBP29.45■■■□□ 2.31
CXXC1-216ENST00000591474 MAP2K1Q02750 393 aaPredicted RBP29.44■■■□□ 2.3
CXXC1-216ENST00000591474 CXCL9Q07325 125 aa29.44■■■□□ 2.3
CXXC1-216ENST00000591474 GRAPQ13588 217 aa29.44■■■□□ 2.3
CXXC1-216ENST00000591474 KRT24Q2M2I5 525 aa29.44■■■□□ 2.3
CXXC1-216ENST00000591474 DDX46Q7L014 1031 aaKnown RBP29.44■■■□□ 2.3
CXXC1-216ENST00000591474 MPNDQ8N594 471 aa29.44■■■□□ 2.3
CXXC1-216ENST00000591474 GRAPLQ8TC17 118 aaPredicted RBP29.44■■■□□ 2.3
CXXC1-216ENST00000591474 FMR1Q06787 632 aaKnown RBP eCLIP29.43■■■□□ 2.3
CXXC1-216ENST00000591474 KIAA2012Q0VF49 1180 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms