RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 CHD1LQ86WJ1 897 aa11.75□□□□□ -0.53
VPS25-205ENST00000590339 DCTPP1Q9H773 170 aa11.75□□□□□ -0.53
VPS25-205ENST00000590339 DDX21Q9NR30 783 aaKnown RBP eCLIP11.75□□□□□ -0.53
VPS25-205ENST00000590339 COL15A1P39059 1388 aa11.75□□□□□ -0.53
VPS25-205ENST00000590339 AFDNP55196 1824 aaKnown RBP11.74□□□□□ -0.53
VPS25-205ENST00000590339 A0A087WZG4 1122 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 SERPINB2P05120 415 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 CHRNA5P30532 468 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 BEND3Q5T5X7 828 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 LRP10Q7Z4F1 713 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 DNAAF4Q8WXU2 420 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 HYPKQ9NX55 129 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 TJP1Q07157 1748 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 COL24A1Q17RW2 1714 aa11.74□□□□□ -0.53
VPS25-205ENST00000590339 ANXA1P04083 346 aa11.73□□□□□ -0.53
VPS25-205ENST00000590339 GNAI2P04899 355 aa11.73□□□□□ -0.53
VPS25-205ENST00000590339 IL6STP40189 918 aaPredicted RBP11.73□□□□□ -0.53
VPS25-205ENST00000590339 TBC1D9BQ66K14 1250 aa11.73□□□□□ -0.53
VPS25-205ENST00000590339 ARHGAP27Q6ZUM4 889 aa11.73□□□□□ -0.53
VPS25-205ENST00000590339 CCDC24Q8N4L8 307 aa11.73□□□□□ -0.53
VPS25-205ENST00000590339 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
VPS25-205ENST00000590339 ALDH1L1O75891 902 aa11.72□□□□□ -0.53
VPS25-205ENST00000590339 KCNA3P22001 575 aa11.72□□□□□ -0.53
VPS25-205ENST00000590339 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
VPS25-205ENST00000590339 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
VPS25-205ENST00000590339 SRCIN1Q9C0H9 1055 aa11.72□□□□□ -0.53
VPS25-205ENST00000590339 USP44Q9H0E7 712 aa11.72□□□□□ -0.53
VPS25-205ENST00000590339 PIM2Q9P1W9 311 aa11.72□□□□□ -0.53
VPS25-205ENST00000590339 ZNF831Q5JPB2 1677 aa11.71□□□□□ -0.53
VPS25-205ENST00000590339 PI4KAP2A4QPH2 592 aa11.71□□□□□ -0.53
VPS25-205ENST00000590339 HMMRO75330 724 aa11.71□□□□□ -0.53
VPS25-205ENST00000590339 ANP32AP39687 249 aaKnown RBP11.71□□□□□ -0.53
VPS25-205ENST00000590339 KSR2Q6VAB6 950 aa11.71□□□□□ -0.53
VPS25-205ENST00000590339 PI4KAP1Q8N8J0 262 aa11.71□□□□□ -0.53
VPS25-205ENST00000590339 LNPKQ9C0E8 428 aa11.71□□□□□ -0.53
VPS25-205ENST00000590339 COL5A3P25940 1745 aaPredicted RBP11.71□□□□□ -0.54
VPS25-205ENST00000590339 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
VPS25-205ENST00000590339 NPHP1O15259 732 aa11.7□□□□□ -0.54
VPS25-205ENST00000590339 DALRD3Q5D0E6 543 aaKnown RBP11.7□□□□□ -0.54
VPS25-205ENST00000590339 UTYO14607 1347 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 CAMTA2O94983 1202 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 DDX58O95786 925 aaKnown RBP11.69□□□□□ -0.54
VPS25-205ENST00000590339 UBTFL1P0CB47 393 aaPredicted RBP11.69□□□□□ -0.54
VPS25-205ENST00000590339 ATP8B2P98198 1209 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 BMP2KLQ5H9B9 411 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 NBPF10Q6P3W6 841 aaKnown RBP11.69□□□□□ -0.54
VPS25-205ENST00000590339 NBPF15Q8N660 670 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 MAP3K2Q9Y2U5 619 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 LRRFIP2Q9Y608 721 aaKnown RBP11.69□□□□□ -0.54
VPS25-205ENST00000590339 UTRNP46939 3433 aa11.69□□□□□ -0.54
VPS25-205ENST00000590339 FAM177BA6PVY3 158 aa11.68□□□□□ -0.54
VPS25-205ENST00000590339 MYL6BP14649 208 aa11.68□□□□□ -0.54
VPS25-205ENST00000590339 MTX1Q13505 466 aa11.68□□□□□ -0.54
VPS25-205ENST00000590339 POLA2Q14181 598 aa11.68□□□□□ -0.54
VPS25-205ENST00000590339 C2CD5Q86YS7 1000 aa11.68□□□□□ -0.54
VPS25-205ENST00000590339 SSH3Q8TE77 659 aa11.68□□□□□ -0.54
VPS25-205ENST00000590339 ANKRD36CQ5JPF3 1778 aa11.68□□□□□ -0.54
VPS25-205ENST00000590339 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
VPS25-205ENST00000590339 H0YIN7 160 aa11.67□□□□□ -0.54
VPS25-205ENST00000590339 LINS1Q8NG48 757 aa11.67□□□□□ -0.54
VPS25-205ENST00000590339 XAGE3Q8WTP9 111 aa11.67□□□□□ -0.54
VPS25-205ENST00000590339 ZNF622Q969S3 477 aaKnown RBP eCLIP11.67□□□□□ -0.54
VPS25-205ENST00000590339 IPO9Q96P70 1041 aaKnown RBP11.67□□□□□ -0.54
VPS25-205ENST00000590339 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
VPS25-205ENST00000590339 SALL3Q9BXA9 1300 aa11.66□□□□□ -0.54
VPS25-205ENST00000590339 NBPF7P0C2Y1 421 aaPredicted RBP11.66□□□□□ -0.54
VPS25-205ENST00000590339 HLFQ16534 295 aa11.66□□□□□ -0.54
VPS25-205ENST00000590339 PRR5LQ6MZQ0 368 aa11.66□□□□□ -0.54
VPS25-205ENST00000590339 PLEKHM2Q8IWE5 1019 aa11.66□□□□□ -0.54
VPS25-205ENST00000590339 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
VPS25-205ENST00000590339 ZNF219Q9P2Y4 722 aaPredicted RBP11.66□□□□□ -0.54
VPS25-205ENST00000590339 SEC24BO95487 1268 aa11.65□□□□□ -0.54
VPS25-205ENST00000590339 IGKV5-2P06315 115 aa11.65□□□□□ -0.54
VPS25-205ENST00000590339 C1QTNF8P60827 252 aa11.65□□□□□ -0.54
VPS25-205ENST00000590339 NBPF5PQ86XG9 351 aaPredicted RBP11.65□□□□□ -0.54
VPS25-205ENST00000590339 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
VPS25-205ENST00000590339 METTL22Q9BUU2 404 aaPredicted RBP11.65□□□□□ -0.54
VPS25-205ENST00000590339 BRIP1Q9BX63 1249 aa11.65□□□□□ -0.54
VPS25-205ENST00000590339 NIP7Q9Y221 180 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS25-205ENST00000590339 ZNF652Q9Y2D9 606 aa11.65□□□□□ -0.54
VPS25-205ENST00000590339 CARMIL3Q8ND23 1372 aa11.65□□□□□ -0.55
VPS25-205ENST00000590339 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
VPS25-205ENST00000590339 PDE6BP35913 854 aa11.64□□□□□ -0.55
VPS25-205ENST00000590339 ST5P78524 1137 aa11.64□□□□□ -0.55
VPS25-205ENST00000590339 CWF19L2Q2TBE0 894 aaKnown RBP11.64□□□□□ -0.55
VPS25-205ENST00000590339 TTC22Q5TAA0 569 aa11.64□□□□□ -0.55
VPS25-205ENST00000590339 C9orf131Q5VYM1 1079 aa11.64□□□□□ -0.55
VPS25-205ENST00000590339 CLEC4GQ6UXB4 293 aa11.64□□□□□ -0.55
VPS25-205ENST00000590339 TTLL7Q6ZT98 887 aa11.64□□□□□ -0.55
VPS25-205ENST00000590339 COPS6Q7L5N1 327 aa11.64□□□□□ -0.55
VPS25-205ENST00000590339 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
VPS25-205ENST00000590339 NEURL1BA8MQ27 555 aa11.63□□□□□ -0.55
VPS25-205ENST00000590339 GRM8O00222 908 aa11.63□□□□□ -0.55
VPS25-205ENST00000590339 GSPT1P15170 499 aaKnown RBP11.63□□□□□ -0.55
VPS25-205ENST00000590339 TPTE2Q6XPS3 522 aa11.63□□□□□ -0.55
VPS25-205ENST00000590339 PPP1R42Q7Z4L9 355 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms