RNA–Protein interactions for RNA: ENST00000590249.5

GHDC-210, Transcript of GH3 domain containing, humanhuman

TSL 4

Gene GHDC, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-210ENST00000590249 SLC51AQ86UW1 340 aa20.43■□□□□ 0.86
GHDC-210ENST00000590249 HOXB7P09629 217 aa20.42■□□□□ 0.86
GHDC-210ENST00000590249 DUSP27Q5VZP5 1158 aa20.42■□□□□ 0.86
GHDC-210ENST00000590249 IFT57Q9NWB7 429 aa20.42■□□□□ 0.86
GHDC-210ENST00000590249 PPP1R42Q7Z4L9 355 aa20.41■□□□□ 0.86
GHDC-210ENST00000590249 C16orf71Q8IYS4 520 aaPredicted RBP20.41■□□□□ 0.86
GHDC-210ENST00000590249 RBM46Q8TBY0 533 aaKnown RBP20.41■□□□□ 0.86
GHDC-210ENST00000590249 ALDH1B1P30837 517 aa20.4■□□□□ 0.86
GHDC-210ENST00000590249 DDX60Q8IY21 1712 aaKnown RBP20.39■□□□□ 0.86
GHDC-210ENST00000590249 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.85
GHDC-210ENST00000590249 FKBP4Q02790 459 aaKnown RBP eCLIP20.39■□□□□ 0.85
GHDC-210ENST00000590249 NLRP10Q86W26 655 aa20.39■□□□□ 0.85
GHDC-210ENST00000590249 RPGRQ92834 1020 aaKnown RBP20.39■□□□□ 0.85
GHDC-210ENST00000590249 UTP14AQ9BVJ6 771 aaKnown RBP20.39■□□□□ 0.85
GHDC-210ENST00000590249 ZNF277Q9NRM2 450 aaPredicted RBP20.39■□□□□ 0.85
GHDC-210ENST00000590249 GNAI1P63096 354 aa20.38■□□□□ 0.85
GHDC-210ENST00000590249 HSP90AB3PQ58FF7 597 aa20.38■□□□□ 0.85
GHDC-210ENST00000590249 SYNE4Q8N205 404 aa20.38■□□□□ 0.85
GHDC-210ENST00000590249 ZNF428Q96B54 188 aa20.38■□□□□ 0.85
GHDC-210ENST00000590249 DBF4Q9UBU7 674 aaPredicted RBP20.38■□□□□ 0.85
GHDC-210ENST00000590249 COL4A5P29400 1685 aa20.38■□□□□ 0.85
GHDC-210ENST00000590249 CEP350Q5VT06 3117 aa20.38■□□□□ 0.85
GHDC-210ENST00000590249 POTECB2RU33 542 aa20.37■□□□□ 0.85
GHDC-210ENST00000590249 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
GHDC-210ENST00000590249 TCIRG1Q13488 830 aa20.37■□□□□ 0.85
GHDC-210ENST00000590249 TAF1P21675 1872 aa20.37■□□□□ 0.85
GHDC-210ENST00000590249 RNF123Q5XPI4 1314 aa20.36■□□□□ 0.85
GHDC-210ENST00000590249 ELL2O00472 640 aaPredicted RBP20.36■□□□□ 0.85
GHDC-210ENST00000590249 VEGFAP15692 232 aaPredicted RBP20.36■□□□□ 0.85
GHDC-210ENST00000590249 PLBD2Q8NHP8 589 aa20.36■□□□□ 0.85
GHDC-210ENST00000590249 MRS2Q9HD23 443 aa20.36■□□□□ 0.85
GHDC-210ENST00000590249 DDNO94850 711 aaPredicted RBP20.35■□□□□ 0.85
GHDC-210ENST00000590249 SLC10A5Q5PT55 438 aa20.35■□□□□ 0.85
GHDC-210ENST00000590249 DPY19L2Q6NUT2 758 aa20.35■□□□□ 0.85
GHDC-210ENST00000590249 RTKN2Q8IZC4 609 aa20.35■□□□□ 0.85
GHDC-210ENST00000590249 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
GHDC-210ENST00000590249 CRAMP1Q96RY5 1269 aa20.35■□□□□ 0.85
GHDC-210ENST00000590249 ZNF541Q9H0D2 1346 aa20.34■□□□□ 0.85
GHDC-210ENST00000590249 PPEF1O14829 653 aaPredicted RBP20.34■□□□□ 0.85
GHDC-210ENST00000590249 ANP32CO43423 234 aa20.34■□□□□ 0.85
GHDC-210ENST00000590249 HCLS1P14317 486 aaPredicted RBP20.34■□□□□ 0.85
GHDC-210ENST00000590249 FSTL1Q12841 308 aa20.34■□□□□ 0.85
GHDC-210ENST00000590249 RBM17Q96I25 401 aaKnown RBP20.34■□□□□ 0.85
GHDC-210ENST00000590249 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
GHDC-210ENST00000590249 HYPKQ9NX55 129 aa20.34■□□□□ 0.85
GHDC-210ENST00000590249 ABCC4O15439 1325 aa20.33■□□□□ 0.85
GHDC-210ENST00000590249 TCERG1O14776 1098 aaKnown RBP20.33■□□□□ 0.85
GHDC-210ENST00000590249 IARSP41252 1262 aaKnown RBP20.33■□□□□ 0.85
GHDC-210ENST00000590249 APLP1P51693 650 aa20.33■□□□□ 0.85
GHDC-210ENST00000590249 ANKRD13DQ6ZTN6 518 aa20.33■□□□□ 0.85
GHDC-210ENST00000590249 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.85
GHDC-210ENST00000590249 TRMT112Q9UI30 125 aaKnown RBP20.33■□□□□ 0.85
GHDC-210ENST00000590249 COL4A1P02462 1669 aa20.32■□□□□ 0.84
GHDC-210ENST00000590249 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
GHDC-210ENST00000590249 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
GHDC-210ENST00000590249 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
GHDC-210ENST00000590249 SMC1BQ8NDV3 1235 aa20.32■□□□□ 0.84
GHDC-210ENST00000590249 PSMD1Q99460 953 aa20.32■□□□□ 0.84
GHDC-210ENST00000590249 ISCA1Q9BUE6 129 aa20.32■□□□□ 0.84
GHDC-210ENST00000590249 PHAXQ9H814 394 aaKnown RBP20.32■□□□□ 0.84
GHDC-210ENST00000590249 SCN4AP35499 1836 aa20.32■□□□□ 0.84
GHDC-210ENST00000590249 HTRA3P83110 453 aa20.31■□□□□ 0.84
GHDC-210ENST00000590249 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
GHDC-210ENST00000590249 CC2D2BQ6DHV5 1058 aa20.31■□□□□ 0.84
GHDC-210ENST00000590249 WWC1Q8IX03 1113 aa20.31■□□□□ 0.84
GHDC-210ENST00000590249 LRRC37AA6NMS7 1700 aa20.3■□□□□ 0.84
GHDC-210ENST00000590249 POTEIP0CG38 1075 aa20.28■□□□□ 0.84
GHDC-210ENST00000590249 POTEJP0CG39 1038 aa20.28■□□□□ 0.84
GHDC-210ENST00000590249 GOLGA2Q08379 1002 aa20.28■□□□□ 0.84
GHDC-210ENST00000590249 FAM89AQ96GI7 184 aa20.28■□□□□ 0.84
GHDC-210ENST00000590249 L3MBTL3Q96JM7 780 aaPredicted RBP20.28■□□□□ 0.84
GHDC-210ENST00000590249 DUOX1Q9NRD9 1551 aa20.27■□□□□ 0.84
GHDC-210ENST00000590249 FZD9O00144 591 aa20.27■□□□□ 0.84
GHDC-210ENST00000590249 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
GHDC-210ENST00000590249 ATP6V0A2Q9Y487 856 aa20.27■□□□□ 0.84
GHDC-210ENST00000590249 RIC3Q7Z5B4 369 aa20.26■□□□□ 0.83
GHDC-210ENST00000590249 DNAJC5GQ8N7S2 189 aa20.26■□□□□ 0.83
GHDC-210ENST00000590249 LTBP1Q14766 1721 aa20.26■□□□□ 0.83
GHDC-210ENST00000590249 ADAMTSL1Q8N6G6 1762 aa20.26■□□□□ 0.83
GHDC-210ENST00000590249 TRIM28Q13263 835 aaKnown RBP20.25■□□□□ 0.83
GHDC-210ENST00000590249 CCDC30Q5VVM6 783 aa20.25■□□□□ 0.83
GHDC-210ENST00000590249 IL16Q14005 1332 aa20.25■□□□□ 0.83
GHDC-210ENST00000590249 GRAPQ13588 217 aa20.24■□□□□ 0.83
GHDC-210ENST00000590249 GRIPAP1Q4V328 841 aa20.24■□□□□ 0.83
GHDC-210ENST00000590249 DDX46Q7L014 1031 aaKnown RBP20.24■□□□□ 0.83
GHDC-210ENST00000590249 LARGE2Q8N3Y3 721 aa20.24■□□□□ 0.83
GHDC-210ENST00000590249 GRAPLQ8TC17 118 aaPredicted RBP20.24■□□□□ 0.83
GHDC-210ENST00000590249 MYD88Q99836 296 aa20.24■□□□□ 0.83
GHDC-210ENST00000590249 TAF1DQ9H5J8 278 aaPredicted RBP20.24■□□□□ 0.83
GHDC-210ENST00000590249 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
GHDC-210ENST00000590249 AOC3Q16853 763 aa20.23■□□□□ 0.83
GHDC-210ENST00000590249 JDP2Q8WYK2 163 aa20.23■□□□□ 0.83
GHDC-210ENST00000590249 FANCIQ9NVI1 1328 aa20.23■□□□□ 0.83
GHDC-210ENST00000590249 IQCA1LA6NCM1 817 aa20.22■□□□□ 0.83
GHDC-210ENST00000590249 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
GHDC-210ENST00000590249 PPIP5K2O43314 1243 aa20.22■□□□□ 0.83
GHDC-210ENST00000590249 BBOX1O75936 387 aa20.22■□□□□ 0.83
GHDC-210ENST00000590249 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
GHDC-210ENST00000590249 NCBP3Q53F19 620 aaKnown RBP20.22■□□□□ 0.83
GHDC-210ENST00000590249 SP8Q8IXZ3 490 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms