RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 HDGFL1Q5TGJ6 251 aa22■■□□□ 1.11
CROCCP3-203ENST00000589964 RBM46Q8TBY0 533 aaKnown RBP22■■□□□ 1.11
CROCCP3-203ENST00000589964 CFAP44Q96MT7 982 aa22■■□□□ 1.11
CROCCP3-203ENST00000589964 ZNF541Q9H0D2 1346 aa22■■□□□ 1.11
CROCCP3-203ENST00000589964 ZC3H4Q9UPT8 1303 aaKnown RBP22■■□□□ 1.11
CROCCP3-203ENST00000589964 ELL2O00472 640 aaPredicted RBP21.99■■□□□ 1.11
CROCCP3-203ENST00000589964 TCERG1O14776 1098 aaKnown RBP21.99■■□□□ 1.11
CROCCP3-203ENST00000589964 DDNO94850 711 aaPredicted RBP21.99■■□□□ 1.11
CROCCP3-203ENST00000589964 POTEIP0CG38 1075 aa21.99■■□□□ 1.11
CROCCP3-203ENST00000589964 POTEJP0CG39 1038 aa21.99■■□□□ 1.11
CROCCP3-203ENST00000589964 NLRP10Q86W26 655 aa21.99■■□□□ 1.11
CROCCP3-203ENST00000589964 NYXQ9GZU5 481 aa21.99■■□□□ 1.11
CROCCP3-203ENST00000589964 LAMB2P55268 1798 aa21.99■■□□□ 1.11
CROCCP3-203ENST00000589964 WDR90Q96KV7 1748 aa21.98■■□□□ 1.11
CROCCP3-203ENST00000589964 HCLS1P14317 486 aaPredicted RBP21.98■■□□□ 1.11
CROCCP3-203ENST00000589964 C8orf58Q8NAV2 365 aa21.98■■□□□ 1.11
CROCCP3-203ENST00000589964 HOXA10P31260 410 aaPredicted RBP21.97■■□□□ 1.11
CROCCP3-203ENST00000589964 FKBP4Q02790 459 aaKnown RBP eCLIP21.97■■□□□ 1.11
CROCCP3-203ENST00000589964 TSPYL6Q8N831 410 aa21.96■■□□□ 1.11
CROCCP3-203ENST00000589964 UTP14AQ9BVJ6 771 aaKnown RBP21.96■■□□□ 1.11
CROCCP3-203ENST00000589964 TAF1P21675 1872 aa21.96■■□□□ 1.11
CROCCP3-203ENST00000589964 ZNF316A6NFI3 1004 aaPredicted RBP21.95■■□□□ 1.1
CROCCP3-203ENST00000589964 ATP5J2-PTCD1G3V325 749 aa21.95■■□□□ 1.1
CROCCP3-203ENST00000589964 TCIRG1Q13488 830 aa21.95■■□□□ 1.1
CROCCP3-203ENST00000589964 C16orf71Q8IYS4 520 aaPredicted RBP21.95■■□□□ 1.1
CROCCP3-203ENST00000589964 DNAJC5GQ8N7S2 189 aa21.95■■□□□ 1.1
CROCCP3-203ENST00000589964 TSR2Q969E8 191 aaKnown RBP21.95■■□□□ 1.1
CROCCP3-203ENST00000589964 PARP10Q53GL7 1025 aa21.94■■□□□ 1.1
CROCCP3-203ENST00000589964 RPGRQ92834 1020 aaKnown RBP21.94■■□□□ 1.1
CROCCP3-203ENST00000589964 PHAXQ9H814 394 aaKnown RBP21.94■■□□□ 1.1
CROCCP3-203ENST00000589964 IFT57Q9NWB7 429 aa21.94■■□□□ 1.1
CROCCP3-203ENST00000589964 ABCC4O15439 1325 aa21.93■■□□□ 1.1
CROCCP3-203ENST00000589964 VEGFAP15692 232 aaPredicted RBP21.93■■□□□ 1.1
CROCCP3-203ENST00000589964 SLC10A5Q5PT55 438 aa21.93■■□□□ 1.1
CROCCP3-203ENST00000589964 SOGA3Q5TF21 947 aa21.93■■□□□ 1.1
CROCCP3-203ENST00000589964 DDX60Q8IY21 1712 aaKnown RBP21.92■■□□□ 1.1
CROCCP3-203ENST00000589964 PPP1R42Q7Z4L9 355 aa21.92■■□□□ 1.1
CROCCP3-203ENST00000589964 PPEF1O14829 653 aaPredicted RBP21.91■■□□□ 1.1
CROCCP3-203ENST00000589964 HOXB7P09629 217 aa21.91■■□□□ 1.1
CROCCP3-203ENST00000589964 ALDH1B1P30837 517 aa21.91■■□□□ 1.1
CROCCP3-203ENST00000589964 ZEB1P37275 1124 aaPredicted RBP21.91■■□□□ 1.1
CROCCP3-203ENST00000589964 RTL5Q5HYW3 569 aaPredicted RBP21.91■■□□□ 1.1
CROCCP3-203ENST00000589964 PLBD2Q8NHP8 589 aa21.91■■□□□ 1.1
CROCCP3-203ENST00000589964 CRAMP1Q96RY5 1269 aa21.91■■□□□ 1.1
CROCCP3-203ENST00000589964 ISCA1Q9BUE6 129 aa21.91■■□□□ 1.1
CROCCP3-203ENST00000589964 IARSP41252 1262 aaKnown RBP21.9■■□□□ 1.1
CROCCP3-203ENST00000589964 APLP1P51693 650 aa21.9■■□□□ 1.1
CROCCP3-203ENST00000589964 DBF4Q9UBU7 674 aaPredicted RBP21.9■■□□□ 1.1
CROCCP3-203ENST00000589964 TRMT112Q9UI30 125 aaKnown RBP21.9■■□□□ 1.1
CROCCP3-203ENST00000589964 FSTL1Q12841 308 aa21.89■■□□□ 1.09
CROCCP3-203ENST00000589964 ANKRD13DQ6ZTN6 518 aa21.89■■□□□ 1.09
CROCCP3-203ENST00000589964 RTKN2Q8IZC4 609 aa21.89■■□□□ 1.09
CROCCP3-203ENST00000589964 FAM89AQ96GI7 184 aa21.89■■□□□ 1.09
CROCCP3-203ENST00000589964 MRS2Q9HD23 443 aa21.89■■□□□ 1.09
CROCCP3-203ENST00000589964 GNAI1P63096 354 aa21.88■■□□□ 1.09
CROCCP3-203ENST00000589964 SMC1BQ8NDV3 1235 aa21.88■■□□□ 1.09
CROCCP3-203ENST00000589964 JARID2Q92833 1246 aaPredicted RBP21.88■■□□□ 1.09
CROCCP3-203ENST00000589964 RBM17Q96I25 401 aaKnown RBP21.88■■□□□ 1.09
CROCCP3-203ENST00000589964 LTBP1Q14766 1721 aa21.88■■□□□ 1.09
CROCCP3-203ENST00000589964 DPY19L2Q6NUT2 758 aa21.87■■□□□ 1.09
CROCCP3-203ENST00000589964 WWC1Q8IX03 1113 aa21.87■■□□□ 1.09
CROCCP3-203ENST00000589964 NLRP3Q96P20 1036 aa21.87■■□□□ 1.09
CROCCP3-203ENST00000589964 PSMD1Q99460 953 aa21.87■■□□□ 1.09
CROCCP3-203ENST00000589964 DUOX1Q9NRD9 1551 aa21.87■■□□□ 1.09
CROCCP3-203ENST00000589964 SH3TC1Q8TE82 1336 aa21.86■■□□□ 1.09
CROCCP3-203ENST00000589964 FZD9O00144 591 aa21.86■■□□□ 1.09
CROCCP3-203ENST00000589964 HSP90AB3PQ58FF7 597 aa21.86■■□□□ 1.09
CROCCP3-203ENST00000589964 HYPKQ9NX55 129 aa21.86■■□□□ 1.09
CROCCP3-203ENST00000589964 SALL2Q9Y467 1007 aaPredicted RBP21.86■■□□□ 1.09
CROCCP3-203ENST00000589964 L3MBTL3Q96JM7 780 aaPredicted RBP21.85■■□□□ 1.09
CROCCP3-203ENST00000589964 RNF123Q5XPI4 1314 aa21.84■■□□□ 1.09
CROCCP3-203ENST00000589964 TAF1DQ9H5J8 278 aaPredicted RBP21.84■■□□□ 1.09
CROCCP3-203ENST00000589964 ATP6V0A2Q9Y487 856 aa21.84■■□□□ 1.09
CROCCP3-203ENST00000589964 AOC3Q16853 763 aa21.83■■□□□ 1.09
CROCCP3-203ENST00000589964 G2E3Q7L622 706 aa21.83■■□□□ 1.09
CROCCP3-203ENST00000589964 SPINK5Q9NQ38 1064 aaPredicted RBP21.83■■□□□ 1.09
CROCCP3-203ENST00000589964 CELF1Q92879 486 aaKnown RBP21.82■■□□□ 1.08
CROCCP3-203ENST00000589964 MYD88Q99836 296 aa21.82■■□□□ 1.08
CROCCP3-203ENST00000589964 ADAMTSL1Q8N6G6 1762 aa21.82■■□□□ 1.08
CROCCP3-203ENST00000589964 LRRC37AA6NMS7 1700 aa21.8■■□□□ 1.08
CROCCP3-203ENST00000589964 ANP32CO43423 234 aa21.8■■□□□ 1.08
CROCCP3-203ENST00000589964 CALD1Q05682 793 aaKnown RBP21.8■■□□□ 1.08
CROCCP3-203ENST00000589964 CCDC27Q2M243 656 aa21.8■■□□□ 1.08
CROCCP3-203ENST00000589964 CC2D2BQ6DHV5 1058 aa21.8■■□□□ 1.08
CROCCP3-203ENST00000589964 RIC3Q7Z5B4 369 aa21.8■■□□□ 1.08
CROCCP3-203ENST00000589964 LARGE2Q8N3Y3 721 aa21.8■■□□□ 1.08
CROCCP3-203ENST00000589964 GRAPQ13588 217 aa21.79■■□□□ 1.08
CROCCP3-203ENST00000589964 GRAPLQ8TC17 118 aaPredicted RBP21.79■■□□□ 1.08
CROCCP3-203ENST00000589964 GPR101Q96P66 508 aaPredicted RBP21.79■■□□□ 1.08
CROCCP3-203ENST00000589964 GJA3Q9Y6H8 435 aa21.79■■□□□ 1.08
CROCCP3-203ENST00000589964 FANCIQ9NVI1 1328 aa21.79■■□□□ 1.08
CROCCP3-203ENST00000589964 IRS4O14654 1257 aaPredicted RBP21.78■■□□□ 1.08
CROCCP3-203ENST00000589964 PPIP5K2O43314 1243 aa21.78■■□□□ 1.08
CROCCP3-203ENST00000589964 GOLGA2Q08379 1002 aa21.78■■□□□ 1.08
CROCCP3-203ENST00000589964 TRIM28Q13263 835 aaKnown RBP21.78■■□□□ 1.08
CROCCP3-203ENST00000589964 EAPPQ56P03 285 aaPredicted RBP21.78■■□□□ 1.08
CROCCP3-203ENST00000589964 CHADLQ6NUI6 762 aa21.78■■□□□ 1.08
CROCCP3-203ENST00000589964 KLRG1Q96E93 195 aa21.78■■□□□ 1.08
CROCCP3-203ENST00000589964 SEC31BQ9NQW1 1179 aa21.78■■□□□ 1.08
CROCCP3-203ENST00000589964 SCN4AP35499 1836 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms