RNA–Protein interactions for RNA: ENST00000589575.5

PTBP1-214, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-214ENST00000589575 DPY19L2Q6NUT2 758 aa16.9■□□□□ 0.3
PTBP1-214ENST00000589575 NLRP10Q86W26 655 aa16.9■□□□□ 0.3
PTBP1-214ENST00000589575 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
PTBP1-214ENST00000589575 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
PTBP1-214ENST00000589575 CHMP4AQ9BY43 222 aa16.9■□□□□ 0.3
PTBP1-214ENST00000589575 TRMT112Q9UI30 125 aaKnown RBP16.9■□□□□ 0.3
PTBP1-214ENST00000589575 TOMM70O94826 608 aa16.89■□□□□ 0.29
PTBP1-214ENST00000589575 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
PTBP1-214ENST00000589575 CCDC27Q2M243 656 aa16.89■□□□□ 0.29
PTBP1-214ENST00000589575 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
PTBP1-214ENST00000589575 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
PTBP1-214ENST00000589575 C8orf58Q8NAV2 365 aa16.89■□□□□ 0.29
PTBP1-214ENST00000589575 C7orf43Q8WVR3 580 aa16.89■□□□□ 0.29
PTBP1-214ENST00000589575 TSR2Q969E8 191 aaKnown RBP16.89■□□□□ 0.29
PTBP1-214ENST00000589575 LTBP3Q9NS15 1303 aa16.89■□□□□ 0.29
PTBP1-214ENST00000589575 GLTPD2A6NH11 291 aa16.88■□□□□ 0.29
PTBP1-214ENST00000589575 TCERG1O14776 1098 aaKnown RBP16.88■□□□□ 0.29
PTBP1-214ENST00000589575 FKBP4Q02790 459 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■■□□ 19
PTBP1-214ENST00000589575 CCDC30Q5VVM6 783 aa16.88■□□□□ 0.29
PTBP1-214ENST00000589575 OLFM4Q6UX06 510 aa16.88■□□□□ 0.29
PTBP1-214ENST00000589575 RIC3Q7Z5B4 369 aa16.88■□□□□ 0.29
PTBP1-214ENST00000589575 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
PTBP1-214ENST00000589575 ATP5J2-PTCD1G3V325 749 aa16.87■□□□□ 0.29
PTBP1-214ENST00000589575 HCLS1P14317 486 aaPredicted RBP16.87■□□□□ 0.29
PTBP1-214ENST00000589575 ZNF277Q9NRM2 450 aaPredicted RBP16.87■□□□□ 0.29
PTBP1-214ENST00000589575 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
PTBP1-214ENST00000589575 SH3TC1Q8TE82 1336 aa16.87■□□□□ 0.29
PTBP1-214ENST00000589575 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
PTBP1-214ENST00000589575 C3orf67Q6ZVT6 689 aa16.86■□□□□ 0.29
PTBP1-214ENST00000589575 PHAXQ9H814 394 aaKnown RBP16.86■□□□□ 0.29
PTBP1-214ENST00000589575 RIC1Q4ADV7 1423 aa16.86■□□□□ 0.29
PTBP1-214ENST00000589575 NUP98P52948 1817 aa16.85■□□□□ 0.29
PTBP1-214ENST00000589575 SLX4Q8IY92 1834 aa16.85■□□□□ 0.29
PTBP1-214ENST00000589575 HOXA10P31260 410 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-214ENST00000589575 SLC10A5Q5PT55 438 aa16.85■□□□□ 0.29
PTBP1-214ENST00000589575 CC2D2BQ6DHV5 1058 aa16.85■□□□□ 0.29
PTBP1-214ENST00000589575 SYNE4Q8N205 404 aa16.85■□□□□ 0.29
PTBP1-214ENST00000589575 TSPYL6Q8N831 410 aa16.85■□□□□ 0.29
PTBP1-214ENST00000589575 CRAMP1Q96RY5 1269 aa16.85■□□□□ 0.29
PTBP1-214ENST00000589575 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
PTBP1-214ENST00000589575 DDX58O95786 925 aaKnown RBP16.84■□□□□ 0.29
PTBP1-214ENST00000589575 VEGFAP15692 232 aaPredicted RBP16.84■□□□□ 0.29
PTBP1-214ENST00000589575 HSPA6P17066 643 aa16.84■□□□□ 0.29
PTBP1-214ENST00000589575 RTL5Q5HYW3 569 aaPredicted RBP16.84■□□□□ 0.29
PTBP1-214ENST00000589575 IL16Q14005 1332 aa16.84■□□□□ 0.29
PTBP1-214ENST00000589575 TNRC6CQ9HCJ0 1690 aaKnown RBP16.84■□□□□ 0.29
PTBP1-214ENST00000589575 TWISTNBQ3B726 338 aaPredicted RBP16.83■□□□□ 0.28
PTBP1-214ENST00000589575 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
PTBP1-214ENST00000589575 DDX46Q7L014 1031 aaKnown RBP16.83■□□□□ 0.28
PTBP1-214ENST00000589575 RBM46Q8TBY0 533 aaKnown RBP16.83■□□□□ 0.28
PTBP1-214ENST00000589575 FAM89AQ96GI7 184 aa16.83■□□□□ 0.28
PTBP1-214ENST00000589575 MYD88Q99836 296 aa16.83■□□□□ 0.28
PTBP1-214ENST00000589575 ISCA1Q9BUE6 129 aa16.83■□□□□ 0.28
PTBP1-214ENST00000589575 IARSP41252 1262 aaKnown RBP16.82■□□□□ 0.28
PTBP1-214ENST00000589575 ABCC4O15439 1325 aa16.81■□□□□ 0.28
PTBP1-214ENST00000589575 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
PTBP1-214ENST00000589575 GRIPAP1Q4V328 841 aa16.81■□□□□ 0.28
PTBP1-214ENST00000589575 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
PTBP1-214ENST00000589575 JDP2Q8WYK2 163 aa16.81■□□□□ 0.28
PTBP1-214ENST00000589575 SBF1O95248 1867 aa16.8■□□□□ 0.28
PTBP1-214ENST00000589575 FSTL1Q12841 308 aa16.8■□□□□ 0.28
PTBP1-214ENST00000589575 PSMD1Q99460 953 aa16.8■□□□□ 0.28
PTBP1-214ENST00000589575 ATP6V0A2Q9Y487 856 aa16.8■□□□□ 0.28
PTBP1-214ENST00000589575 CACNA1SQ13698 1873 aa16.8■□□□□ 0.28
PTBP1-214ENST00000589575 FANCIQ9NVI1 1328 aa16.79■□□□□ 0.28
PTBP1-214ENST00000589575 IRS4O14654 1257 aaPredicted RBP16.79■□□□□ 0.28
PTBP1-214ENST00000589575 BBOX1O75936 387 aa16.79■□□□□ 0.28
PTBP1-214ENST00000589575 TRIM28Q13263 835 aaKnown RBP16.79■□□□□ 0.28
PTBP1-214ENST00000589575 SMC1BQ8NDV3 1235 aa16.79■□□□□ 0.28
PTBP1-214ENST00000589575 MAP3K2Q9Y2U5 619 aa16.79■□□□□ 0.28
PTBP1-214ENST00000589575 FER1L6Q2WGJ9 1857 aa16.78■□□□□ 0.28
PTBP1-214ENST00000589575 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
PTBP1-214ENST00000589575 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
PTBP1-214ENST00000589575 GRAPQ13588 217 aa16.78■□□□□ 0.28
PTBP1-214ENST00000589575 SLC51AQ86UW1 340 aa16.78■□□□□ 0.28
PTBP1-214ENST00000589575 LARGE2Q8N3Y3 721 aa16.78■□□□□ 0.28
PTBP1-214ENST00000589575 ZBTB38Q8NAP3 1195 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-214ENST00000589575 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-214ENST00000589575 METTL22Q9BUU2 404 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-214ENST00000589575 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-214ENST00000589575 ARFGEF2Q9Y6D5 1785 aa16.78■□□□□ 0.28
PTBP1-214ENST00000589575 TIAM2Q8IVF5 1701 aa16.77■□□□□ 0.28
PTBP1-214ENST00000589575 APLP1P51693 650 aa16.77■□□□□ 0.28
PTBP1-214ENST00000589575 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.28
PTBP1-214ENST00000589575 NEXNQ0ZGT2 675 aa16.77■□□□□ 0.28
PTBP1-214ENST00000589575 DPP8Q6V1X1 898 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-214ENST00000589575 CCDC191Q8NCU4 936 aa16.77■□□□□ 0.28
PTBP1-214ENST00000589575 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.28
PTBP1-214ENST00000589575 ZNF541Q9H0D2 1346 aa16.76■□□□□ 0.27
PTBP1-214ENST00000589575 PI4KAP2A4QPH2 592 aa16.76■□□□□ 0.27
PTBP1-214ENST00000589575 IQCA1LA6NCM1 817 aa16.76■□□□□ 0.27
PTBP1-214ENST00000589575 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
PTBP1-214ENST00000589575 EXOSC9Q06265 439 aaKnown RBP16.76■□□□□ 0.27
PTBP1-214ENST00000589575 KSR2Q6VAB6 950 aa16.76■□□□□ 0.27
PTBP1-214ENST00000589575 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
PTBP1-214ENST00000589575 PI4KAP1Q8N8J0 262 aa16.76■□□□□ 0.27
PTBP1-214ENST00000589575 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
PTBP1-214ENST00000589575 NIM1KQ8IY84 436 aa16.75■□□□□ 0.27
PTBP1-214ENST00000589575 MPNDQ8N594 471 aa16.75■□□□□ 0.27
PTBP1-214ENST00000589575 JARID2Q92833 1246 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms