RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ASAP1Q9ULH1 1129 aa12.64□□□□□ -0.39
VPS25-203ENST00000589520 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
VPS25-203ENST00000589520 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
VPS25-203ENST00000589520 SASH1O94885 1247 aa12.63□□□□□ -0.39
VPS25-203ENST00000589520 PTPN12Q05209 780 aaKnown RBP12.63□□□□□ -0.39
VPS25-203ENST00000589520 DNAJC10Q8IXB1 793 aa12.63□□□□□ -0.39
VPS25-203ENST00000589520 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
VPS25-203ENST00000589520 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
VPS25-203ENST00000589520 PA2G4Q9UQ80 394 aaKnown RBP12.63□□□□□ -0.39
VPS25-203ENST00000589520 SLIT2O94813 1529 aa12.62□□□□□ -0.39
VPS25-203ENST00000589520 CIAO1O76071 339 aa12.62□□□□□ -0.39
VPS25-203ENST00000589520 ADAMTS2O95450 1211 aa12.62□□□□□ -0.39
VPS25-203ENST00000589520 PCCAP05165 728 aaPredicted RBP12.62□□□□□ -0.39
VPS25-203ENST00000589520 IL6STP40189 918 aaPredicted RBP12.62□□□□□ -0.39
VPS25-203ENST00000589520 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
VPS25-203ENST00000589520 FOXO4P98177 505 aa12.62□□□□□ -0.39
VPS25-203ENST00000589520 KIAA1211Q6ZU35 1233 aa12.62□□□□□ -0.39
VPS25-203ENST00000589520 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
VPS25-203ENST00000589520 SGSM2O43147 1006 aa12.61□□□□□ -0.39
VPS25-203ENST00000589520 CYP19A1P11511 503 aaPredicted RBP12.61□□□□□ -0.39
VPS25-203ENST00000589520 PIP4K2AP48426 406 aaPredicted RBP12.61□□□□□ -0.39
VPS25-203ENST00000589520 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
VPS25-203ENST00000589520 LMBR1LQ6UX01 489 aa12.61□□□□□ -0.39
VPS25-203ENST00000589520 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
VPS25-203ENST00000589520 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
VPS25-203ENST00000589520 EAF2Q96CJ1 260 aaPredicted RBP12.61□□□□□ -0.39
VPS25-203ENST00000589520 CWC22Q9HCG8 908 aaKnown RBP12.61□□□□□ -0.39
VPS25-203ENST00000589520 RAD50Q92878 1312 aa12.61□□□□□ -0.39
VPS25-203ENST00000589520 CDHR2Q9BYE9 1310 aa12.61□□□□□ -0.39
VPS25-203ENST00000589520 HSP90AA1P07900 732 aaKnown RBP12.6□□□□□ -0.39
VPS25-203ENST00000589520 HSP90B1P14625 803 aaKnown RBP12.6□□□□□ -0.39
VPS25-203ENST00000589520 ATP5JP18859 108 aa12.6□□□□□ -0.39
VPS25-203ENST00000589520 PTMSP20962 102 aa12.6□□□□□ -0.39
VPS25-203ENST00000589520 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
VPS25-203ENST00000589520 TSHZ3Q63HK5 1081 aa12.6□□□□□ -0.39
VPS25-203ENST00000589520 ZBTB38Q8NAP3 1195 aaPredicted RBP12.6□□□□□ -0.39
VPS25-203ENST00000589520 AK7Q96M32 723 aa12.6□□□□□ -0.39
VPS25-203ENST00000589520 SLKQ9H2G2 1235 aaPredicted RBP12.6□□□□□ -0.39
VPS25-203ENST00000589520 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
VPS25-203ENST00000589520 ANO2Q9NQ90 1003 aa12.6□□□□□ -0.39
VPS25-203ENST00000589520 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
VPS25-203ENST00000589520 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
VPS25-203ENST00000589520 RGL2O15211 777 aa12.59□□□□□ -0.39
VPS25-203ENST00000589520 VPS72Q15906 364 aa12.59□□□□□ -0.39
VPS25-203ENST00000589520 DIAPH3Q9NSV4 1193 aa12.59□□□□□ -0.39
VPS25-203ENST00000589520 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
VPS25-203ENST00000589520 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
VPS25-203ENST00000589520 RFX7Q2KHR2 1363 aa12.58□□□□□ -0.4
VPS25-203ENST00000589520 EYA2O00167 538 aa12.58□□□□□ -0.4
VPS25-203ENST00000589520 HSPA4P34932 840 aa12.58□□□□□ -0.4
VPS25-203ENST00000589520 DDIT3P35638 169 aa12.58□□□□□ -0.4
VPS25-203ENST00000589520 TNNI3KQ59H18 835 aa12.58□□□□□ -0.4
VPS25-203ENST00000589520 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
VPS25-203ENST00000589520 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
VPS25-203ENST00000589520 AKAP2Q9Y2D5 859 aa12.58□□□□□ -0.4
VPS25-203ENST00000589520 FPGT-TNNI3KV9GXZ4 949 aa12.58□□□□□ -0.4
VPS25-203ENST00000589520 CSF1RP07333 972 aa12.57□□□□□ -0.4
VPS25-203ENST00000589520 CCDC57Q2TAC2 916 aa12.57□□□□□ -0.4
VPS25-203ENST00000589520 FNBP4Q8N3X1 1017 aaPredicted RBP12.57□□□□□ -0.4
VPS25-203ENST00000589520 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.57□□□□□ -0.4
VPS25-203ENST00000589520 CCDC8Q9H0W5 538 aaPredicted RBP12.57□□□□□ -0.4
VPS25-203ENST00000589520 SIL1Q9H173 461 aa12.57□□□□□ -0.4
VPS25-203ENST00000589520 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
VPS25-203ENST00000589520 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
VPS25-203ENST00000589520 NUCB2P80303 420 aa12.56□□□□□ -0.4
VPS25-203ENST00000589520 TFCP2Q12800 502 aa12.56□□□□□ -0.4
VPS25-203ENST00000589520 LRRFIP1Q32MZ4 808 aaKnown RBP12.56□□□□□ -0.4
VPS25-203ENST00000589520 MARCH10Q8NA82 808 aaPredicted RBP12.56□□□□□ -0.4
VPS25-203ENST00000589520 CHMP3Q9Y3E7 222 aa12.56□□□□□ -0.4
VPS25-203ENST00000589520 AFF2P51816 1311 aa12.56□□□□□ -0.4
VPS25-203ENST00000589520 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
VPS25-203ENST00000589520 NUP188Q5SRE5 1749 aa12.55□□□□□ -0.4
VPS25-203ENST00000589520 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
VPS25-203ENST00000589520 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
VPS25-203ENST00000589520 NGLY1Q96IV0 654 aa12.55□□□□□ -0.4
VPS25-203ENST00000589520 SLC4A9Q96Q91 983 aa12.55□□□□□ -0.4
VPS25-203ENST00000589520 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
VPS25-203ENST00000589520 CCDC87Q9NVE4 849 aa12.55□□□□□ -0.4
VPS25-203ENST00000589520 CEP126Q9P2H0 1117 aa12.55□□□□□ -0.4
VPS25-203ENST00000589520 WNK3Q9BYP7 1800 aa12.55□□□□□ -0.4
VPS25-203ENST00000589520 ITGB4P16144 1822 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 AFDNP55196 1824 aaKnown RBP12.54□□□□□ -0.4
VPS25-203ENST00000589520 YY1P25490 414 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 NEK4P51957 841 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 IFIT5Q13325 482 aaKnown RBP12.54□□□□□ -0.4
VPS25-203ENST00000589520 PARP10Q53GL7 1025 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 CWC27Q6UX04 472 aaKnown RBP12.54□□□□□ -0.4
VPS25-203ENST00000589520 ATG9AQ7Z3C6 839 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
VPS25-203ENST00000589520 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 KCNB2Q92953 911 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 INTS4Q96HW7 963 aaKnown RBP12.54□□□□□ -0.4
VPS25-203ENST00000589520 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 HAUS7Q99871 368 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
VPS25-203ENST00000589520 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
VPS25-203ENST00000589520 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
VPS25-203ENST00000589520 DDX11L8A8MPP1 907 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms