RNA–Protein interactions for RNA: ENST00000588909.1

TPGS2-208, Transcript of tubulin polyglutamylase complex subunit 2, human

TSL 5

Gene TPGS2, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPGS2-208	ENST00000588909	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.49	■■■□□ 2.95
TPGS2-208	ENST00000588909	ALDH1B1	P30837	517 aa		33.48	■■■□□ 2.95
TPGS2-208	ENST00000588909	CALD1	Q05682	793 aa	Known RBP	33.48	■■■□□ 2.95
TPGS2-208	ENST00000588909	RPGR	Q92834	1020 aa	Known RBP	33.48	■■■□□ 2.95
TPGS2-208	ENST00000588909	UTP14A	Q9BVJ6	771 aa	Known RBP	33.48	■■■□□ 2.95
TPGS2-208	ENST00000588909	GLTPD2	A6NH11	291 aa		33.47	■■■□□ 2.95
TPGS2-208	ENST00000588909	SLC51A	Q86UW1	340 aa		33.47	■■■□□ 2.95
TPGS2-208	ENST00000588909	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.47	■■■□□ 2.95
TPGS2-208	ENST00000588909	DBF4	Q9UBU7	674 aa	Predicted RBP	33.47	■■■□□ 2.95
TPGS2-208	ENST00000588909	LTBP3	Q9NS15	1303 aa		33.47	■■■□□ 2.95
TPGS2-208	ENST00000588909	SYNE4	Q8N205	404 aa		33.46	■■■□□ 2.95
TPGS2-208	ENST00000588909	HSPA6	P17066	643 aa		33.45	■■■□□ 2.95
TPGS2-208	ENST00000588909	TCIRG1	Q13488	830 aa		33.45	■■■□□ 2.95
TPGS2-208	ENST00000588909	NLRP10	Q86W26	655 aa		33.45	■■■□□ 2.95
TPGS2-208	ENST00000588909	C8orf58	Q8NAV2	365 aa		33.45	■■■□□ 2.95
TPGS2-208	ENST00000588909	TCERG1	O14776	1098 aa	Known RBP	33.44	■■■□□ 2.94
TPGS2-208	ENST00000588909	HSP90AB3P	Q58FF7	597 aa		33.44	■■■□□ 2.94
TPGS2-208	ENST00000588909	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.44	■■■□□ 2.94
TPGS2-208	ENST00000588909	RIC1	Q4ADV7	1423 aa		33.44	■■■□□ 2.94
TPGS2-208	ENST00000588909	TSR2	Q969E8	191 aa	Known RBP	33.43	■■■□□ 2.94
TPGS2-208	ENST00000588909	ANKRD13D	Q6ZTN6	518 aa		33.42	■■■□□ 2.94
TPGS2-208	ENST00000588909	HCLS1	P14317	486 aa	Predicted RBP	33.41	■■■□□ 2.94
TPGS2-208	ENST00000588909	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.41	■■■□□ 2.94
TPGS2-208	ENST00000588909	PLBD2	Q8NHP8	589 aa		33.41	■■■□□ 2.94
TPGS2-208	ENST00000588909	HYPK	Q9NX55	129 aa		33.41	■■■□□ 2.94
TPGS2-208	ENST00000588909	TRMT112	Q9UI30	125 aa	Known RBP	33.41	■■■□□ 2.94
TPGS2-208	ENST00000588909	ANKRD36C	Q5JPF3	1778 aa		33.4	■■■□□ 2.94
TPGS2-208	ENST00000588909	RBM17	Q96I25	401 aa	Known RBP	33.4	■■■□□ 2.94
TPGS2-208	ENST00000588909	NLRP3	Q96P20	1036 aa		33.4	■■■□□ 2.94
TPGS2-208	ENST00000588909	SALL2	Q9Y467	1007 aa	Predicted RBP	33.4	■■■□□ 2.94
TPGS2-208	ENST00000588909	ATP5J2-PTCD1	G3V325	749 aa		33.39	■■■□□ 2.94
TPGS2-208	ENST00000588909	HOXA10	P31260	410 aa	Predicted RBP	33.39	■■■□□ 2.94
TPGS2-208	ENST00000588909	TSPYL6	Q8N831	410 aa		33.39	■■■□□ 2.94
TPGS2-208	ENST00000588909	RBM46	Q8TBY0	533 aa	Known RBP	33.39	■■■□□ 2.94
TPGS2-208	ENST00000588909	PHAX	Q9H814	394 aa	Known RBP	33.39	■■■□□ 2.94
TPGS2-208	ENST00000588909	DPY19L2	Q6NUT2	758 aa		33.38	■■■□□ 2.93
TPGS2-208	ENST00000588909	WWC1	Q8IX03	1113 aa		33.38	■■■□□ 2.93
TPGS2-208	ENST00000588909	RTKN2	Q8IZC4	609 aa		33.38	■■■□□ 2.93
TPGS2-208	ENST00000588909	SLC10A5	Q5PT55	438 aa		33.37	■■■□□ 2.93
TPGS2-208	ENST00000588909	DICER1	Q9UPY3	1922 aa	Known RBP	33.36	■■■□□ 2.93
TPGS2-208	ENST00000588909	DDN	O94850	711 aa	Predicted RBP	33.36	■■■□□ 2.93
TPGS2-208	ENST00000588909	PPEF1	O14829	653 aa	Predicted RBP	33.35	■■■□□ 2.93
TPGS2-208	ENST00000588909	VEGFA	P15692	232 aa	Predicted RBP	33.35	■■■□□ 2.93
TPGS2-208	ENST00000588909	CRAMP1	Q96RY5	1269 aa		33.35	■■■□□ 2.93
TPGS2-208	ENST00000588909	POTEC	B2RU33	542 aa		33.34	■■■□□ 2.93
TPGS2-208	ENST00000588909	CCDC27	Q2M243	656 aa		33.34	■■■□□ 2.93
TPGS2-208	ENST00000588909	SH3TC1	Q8TE82	1336 aa		33.33	■■■□□ 2.93
TPGS2-208	ENST00000588909	RTL5	Q5HYW3	569 aa	Predicted RBP	33.33	■■■□□ 2.93
TPGS2-208	ENST00000588909	ISCA1	Q9BUE6	129 aa		33.33	■■■□□ 2.93
TPGS2-208	ENST00000588909	ABCC4	O15439	1325 aa		33.32	■■■□□ 2.93
TPGS2-208	ENST00000588909	RNF123	Q5XPI4	1314 aa		33.32	■■■□□ 2.93
TPGS2-208	ENST00000588909	RIC3	Q7Z5B4	369 aa		33.32	■■■□□ 2.92
TPGS2-208	ENST00000588909	SNED1	Q8TER0	1413 aa		33.32	■■■□□ 2.92
TPGS2-208	ENST00000588909	IARS	P41252	1262 aa	Known RBP	33.31	■■■□□ 2.92
TPGS2-208	ENST00000588909	FAM89A	Q96GI7	184 aa		33.31	■■■□□ 2.92
TPGS2-208	ENST00000588909	GOLGA2	Q08379	1002 aa		33.3	■■■□□ 2.92
TPGS2-208	ENST00000588909	FAM9B	Q8IZU0	186 aa		33.3	■■■□□ 2.92
TPGS2-208	ENST00000588909	ZNF541	Q9H0D2	1346 aa		33.29	■■■□□ 2.92
TPGS2-208	ENST00000588909	CCDC30	Q5VVM6	783 aa		33.28	■■■□□ 2.92
TPGS2-208	ENST00000588909	PSMD1	Q99460	953 aa		33.28	■■■□□ 2.92
TPGS2-208	ENST00000588909	WDR90	Q96KV7	1748 aa		33.28	■■■□□ 2.92
TPGS2-208	ENST00000588909	LAMB2	P55268	1798 aa		33.27	■■■□□ 2.92
TPGS2-208	ENST00000588909	FSTL1	Q12841	308 aa		33.27	■■■□□ 2.92
TPGS2-208	ENST00000588909	CC2D2B	Q6DHV5	1058 aa		33.27	■■■□□ 2.92
TPGS2-208	ENST00000588909	MYD88	Q99836	296 aa		33.27	■■■□□ 2.92
TPGS2-208	ENST00000588909	HTRA3	P83110	453 aa		33.26	■■■□□ 2.91
TPGS2-208	ENST00000588909	APLP1	P51693	650 aa		33.25	■■■□□ 2.91
TPGS2-208	ENST00000588909	SMC1B	Q8NDV3	1235 aa		33.25	■■■□□ 2.91
TPGS2-208	ENST00000588909	DDX46	Q7L014	1031 aa	Known RBP	33.24	■■■□□ 2.91
TPGS2-208	ENST00000588909	COL4A5	P29400	1685 aa		33.23	■■■□□ 2.91
TPGS2-208	ENST00000588909	TWISTNB	Q3B726	338 aa	Predicted RBP	33.23	■■■□□ 2.91
TPGS2-208	ENST00000588909	ATP6V0A2	Q9Y487	856 aa		33.23	■■■□□ 2.91
TPGS2-208	ENST00000588909	IL16	Q14005	1332 aa		33.22	■■■□□ 2.91
TPGS2-208	ENST00000588909	POTEI	P0CG38	1075 aa		33.21	■■■□□ 2.91
TPGS2-208	ENST00000588909	POTEJ	P0CG39	1038 aa		33.21	■■■□□ 2.91
TPGS2-208	ENST00000588909	JARID2	Q92833	1246 aa	Predicted RBP	33.21	■■■□□ 2.91
TPGS2-208	ENST00000588909	DDX60	Q8IY21	1712 aa	Known RBP	33.21	■■■□□ 2.91
TPGS2-208	ENST00000588909	FANCI	Q9NVI1	1328 aa		33.21	■■■□□ 2.91
TPGS2-208	ENST00000588909	TRIM28	Q13263	835 aa	Known RBP	33.2	■■■□□ 2.91
TPGS2-208	ENST00000588909	LARGE2	Q8N3Y3	721 aa		33.2	■■■□□ 2.91
TPGS2-208	ENST00000588909	JDP2	Q8WYK2	163 aa		33.2	■■■□□ 2.91
TPGS2-208	ENST00000588909	TMX4	Q9H1E5	349 aa	Predicted RBP	33.2	■■■□□ 2.91
TPGS2-208	ENST00000588909	FZD9	O00144	591 aa		33.19	■■■□□ 2.9
TPGS2-208	ENST00000588909	IRS4	O14654	1257 aa	Predicted RBP	33.19	■■■□□ 2.9
TPGS2-208	ENST00000588909	GRAP	Q13588	217 aa		33.19	■■■□□ 2.9
TPGS2-208	ENST00000588909	GRAPL	Q8TC17	118 aa	Predicted RBP	33.19	■■■□□ 2.9
TPGS2-208	ENST00000588909	TAF1	P21675	1872 aa		33.18	■■■□□ 2.9
TPGS2-208	ENST00000588909	BBOX1	O75936	387 aa		33.18	■■■□□ 2.9
TPGS2-208	ENST00000588909	G2E3	Q7L622	706 aa		33.18	■■■□□ 2.9
TPGS2-208	ENST00000588909	STK31	Q9BXU1	1019 aa		33.18	■■■□□ 2.9
TPGS2-208	ENST00000588909	MAP3K2	Q9Y2U5	619 aa		33.18	■■■□□ 2.9
TPGS2-208	ENST00000588909	DDX58	O95786	925 aa	Known RBP	33.17	■■■□□ 2.9
TPGS2-208	ENST00000588909	GRIPAP1	Q4V328	841 aa		33.17	■■■□□ 2.9
TPGS2-208	ENST00000588909	NCBP3	Q53F19	620 aa	Known RBP	33.17	■■■□□ 2.9
TPGS2-208	ENST00000588909	METTL22	Q9BUU2	404 aa	Predicted RBP	33.17	■■■□□ 2.9
TPGS2-208	ENST00000588909	AOC3	Q16853	763 aa		33.16	■■■□□ 2.9
TPGS2-208	ENST00000588909	SP8	Q8IXZ3	490 aa		33.16	■■■□□ 2.9
TPGS2-208	ENST00000588909	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.16	■■■□□ 2.9
TPGS2-208	ENST00000588909	CHMP4A	Q9BY43	222 aa		33.16	■■■□□ 2.9
TPGS2-208	ENST00000588909	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.16	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms