RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 SSFA2P28290 1259 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 RFC4P35249 363 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 NLRP10Q86W26 655 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 NUP98P52948 1817 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
NEDD4L-224ENST00000588712 NUCB1Q02818 461 aa13.13□□□□□ -0.31
NEDD4L-224ENST00000588712 POLA2Q14181 598 aa13.13□□□□□ -0.31
NEDD4L-224ENST00000588712 RAB11FIP3O75154 756 aa13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 CASP7P55210 303 aa13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 SUCLG2Q96I99 432 aa13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 ANKRD36CQ5JPF3 1778 aa13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 RABL6Q3YEC7 729 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 PLA2G12BQ9BX93 195 aa13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 BICC1Q9H694 974 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 TRMT112Q9UI30 125 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-224ENST00000588712 ANKRD45Q5TZF3 282 aa13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 CHD1LQ86WJ1 897 aa13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 PROM2Q8N271 834 aa13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 PNMA6EA0A0J9YXQ4 647 aa13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 GPTP24298 496 aa13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 BAG6P46379 1132 aa13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 ERC1Q8IUD2 1116 aa13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 KAZALD1Q96I82 304 aa13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-224ENST00000588712 SH3TC1Q8TE82 1336 aa13.1□□□□□ -0.31
NEDD4L-224ENST00000588712 USPL1Q5W0Q7 1092 aa13.1□□□□□ -0.31
NEDD4L-224ENST00000588712 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
NEDD4L-224ENST00000588712 NYXQ9GZU5 481 aa13.1□□□□□ -0.31
NEDD4L-224ENST00000588712 TNS1Q9HBL0 1735 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-224ENST00000588712 USP42Q9H9J4 1324 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-224ENST00000588712 BCORQ6W2J9 1755 aa13.1□□□□□ -0.31
NEDD4L-224ENST00000588712 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
NEDD4L-224ENST00000588712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
NEDD4L-224ENST00000588712 FAM89AQ96GI7 184 aa13.09□□□□□ -0.31
NEDD4L-224ENST00000588712 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
NEDD4L-224ENST00000588712 TFCP2L1Q9NZI6 479 aa13.09□□□□□ -0.31
NEDD4L-224ENST00000588712 PDE8AO60658 829 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 FOXO4P98177 505 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 UBN2Q6ZU65 1347 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 PHF14O94880 888 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 G3BP1Q13283 466 aaKnown RBP eCLIP13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 SUSD4Q5VX71 490 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 LMBR1LQ6UX01 489 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 TPTE2Q6XPS3 522 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 KIF1BPQ96EK5 621 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 COPRSQ9NQ92 184 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
NEDD4L-224ENST00000588712 CSF1RP07333 972 aa13.07□□□□□ -0.32
NEDD4L-224ENST00000588712 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
NEDD4L-224ENST00000588712 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
NEDD4L-224ENST00000588712 UBR3Q6ZT12 1888 aa13.07□□□□□ -0.32
NEDD4L-224ENST00000588712 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
NEDD4L-224ENST00000588712 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
NEDD4L-224ENST00000588712 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
NEDD4L-224ENST00000588712 EXOC6BQ9Y2D4 811 aa13.06□□□□□ -0.32
NEDD4L-224ENST00000588712 RGS3P49796 1198 aa13.06□□□□□ -0.32
NEDD4L-224ENST00000588712 JARID2Q92833 1246 aaPredicted RBP13.06□□□□□ -0.32
NEDD4L-224ENST00000588712 LNPKQ9C0E8 428 aa13.06□□□□□ -0.32
NEDD4L-224ENST00000588712 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
NEDD4L-224ENST00000588712 NTSR2O95665 410 aa13.05□□□□□ -0.32
NEDD4L-224ENST00000588712 IFIT5Q13325 482 aaKnown RBP13.05□□□□□ -0.32
NEDD4L-224ENST00000588712 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
NEDD4L-224ENST00000588712 NLGN1Q8N2Q7 840 aa13.05□□□□□ -0.32
NEDD4L-224ENST00000588712 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
NEDD4L-224ENST00000588712 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
NEDD4L-224ENST00000588712 CHMP3Q9Y3E7 222 aa13.05□□□□□ -0.32
NEDD4L-224ENST00000588712 CTSWP56202 376 aa13.04□□□□□ -0.32
NEDD4L-224ENST00000588712 SLC10A5Q5PT55 438 aa13.04□□□□□ -0.32
NEDD4L-224ENST00000588712 NBPF5PQ86XG9 351 aaPredicted RBP13.04□□□□□ -0.32
NEDD4L-224ENST00000588712 RHPN1Q8TCX5 695 aa13.04□□□□□ -0.32
NEDD4L-224ENST00000588712 CARMIL3Q8ND23 1372 aa13.04□□□□□ -0.32
NEDD4L-224ENST00000588712 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
NEDD4L-224ENST00000588712 CLASRPQ8N2M8 674 aaKnown RBP13.04□□□□□ -0.32
NEDD4L-224ENST00000588712 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
NEDD4L-224ENST00000588712 ANP32EQ9BTT0 268 aa13.04□□□□□ -0.32
NEDD4L-224ENST00000588712 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 CIAO1O76071 339 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 GYS1P13807 737 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 RFX5P48382 616 aaPredicted RBP13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 PTPN12Q05209 780 aaKnown RBP13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 EZH2Q15910 746 aaKnown RBP13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 BICDL1Q6ZP65 573 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 C4AP0C0L4 1744 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 APBB1O00213 710 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 NPHP1O15259 732 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 TAF7LQ5H9L4 462 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
NEDD4L-224ENST00000588712 IL15P40933 162 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms