RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 PARP10Q53GL7 1025 aa17.57■□□□□ 0.4
NLE1-205ENST00000588642 RTL5Q5HYW3 569 aaPredicted RBP17.57■□□□□ 0.4
NLE1-205ENST00000588642 BICDL1Q6ZP65 573 aa17.57■□□□□ 0.4
NLE1-205ENST00000588642 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
NLE1-205ENST00000588642 UPF1Q92900 1129 aaKnown RBP eCLIP17.57■□□□□ 0.4
NLE1-205ENST00000588642 SUCLG2Q96I99 432 aa17.57■□□□□ 0.4
NLE1-205ENST00000588642 TRMT112Q9UI30 125 aaKnown RBP17.57■□□□□ 0.4
NLE1-205ENST00000588642 IGHDP01880 384 aa17.56■□□□□ 0.4
NLE1-205ENST00000588642 SLC15A2Q16348 729 aa17.56■□□□□ 0.4
NLE1-205ENST00000588642 TBC1D9BQ66K14 1250 aa17.56■□□□□ 0.4
NLE1-205ENST00000588642 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
NLE1-205ENST00000588642 COL23A1Q86Y22 540 aaPredicted RBP17.56■□□□□ 0.4
NLE1-205ENST00000588642 SETDB2Q96T68 719 aa17.56■□□□□ 0.4
NLE1-205ENST00000588642 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
NLE1-205ENST00000588642 TAF1LQ8IZX4 1826 aa17.56■□□□□ 0.4
NLE1-205ENST00000588642 UBN2Q6ZU65 1347 aa17.55■□□□□ 0.4
NLE1-205ENST00000588642 CASP7P55210 303 aa17.55■□□□□ 0.4
NLE1-205ENST00000588642 ATP8B2P98198 1209 aa17.55■□□□□ 0.4
NLE1-205ENST00000588642 HDAC1Q13547 482 aaPredicted RBP17.55■□□□□ 0.4
NLE1-205ENST00000588642 SUSD4Q5VX71 490 aa17.55■□□□□ 0.4
NLE1-205ENST00000588642 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
NLE1-205ENST00000588642 ZBTB38Q8NAP3 1195 aaPredicted RBP17.55■□□□□ 0.4
NLE1-205ENST00000588642 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
NLE1-205ENST00000588642 ANO8Q9HCE9 1232 aaPredicted RBP17.55■□□□□ 0.4
NLE1-205ENST00000588642 ARFGEF2Q9Y6D5 1785 aa17.55■□□□□ 0.4
NLE1-205ENST00000588642 HMMRO75330 724 aa17.54■□□□□ 0.4
NLE1-205ENST00000588642 SIRT2Q8IXJ6 389 aa17.54■□□□□ 0.4
NLE1-205ENST00000588642 NUP188Q5SRE5 1749 aa17.53■□□□□ 0.4
NLE1-205ENST00000588642 GYS1P13807 737 aa17.53■□□□□ 0.4
NLE1-205ENST00000588642 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
NLE1-205ENST00000588642 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
NLE1-205ENST00000588642 RGPD3A6NKT7 1758 aaPredicted RBP17.53■□□□□ 0.4
NLE1-205ENST00000588642 RGPD4Q7Z3J3 1758 aa17.53■□□□□ 0.4
NLE1-205ENST00000588642 PNPLA7Q6ZV29 1317 aa17.52■□□□□ 0.4
NLE1-205ENST00000588642 SYNE4Q8N205 404 aa17.52■□□□□ 0.4
NLE1-205ENST00000588642 KAZALD1Q96I82 304 aa17.52■□□□□ 0.4
NLE1-205ENST00000588642 SH3TC1Q8TE82 1336 aa17.51■□□□□ 0.39
NLE1-205ENST00000588642 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
NLE1-205ENST00000588642 GTF2E1P29083 439 aaPredicted RBP17.51■□□□□ 0.39
NLE1-205ENST00000588642 NFIXQ14938 502 aa17.51■□□□□ 0.39
NLE1-205ENST00000588642 EPHA10Q5JZY3 1008 aa17.51■□□□□ 0.39
NLE1-205ENST00000588642 NBPF5PQ86XG9 351 aaPredicted RBP17.51■□□□□ 0.39
NLE1-205ENST00000588642 CDHR2Q9BYE9 1310 aa17.5■□□□□ 0.39
NLE1-205ENST00000588642 PNMA6EA0A0J9YXQ4 647 aa17.5■□□□□ 0.39
NLE1-205ENST00000588642 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
NLE1-205ENST00000588642 NTSR2O95665 410 aa17.5■□□□□ 0.39
NLE1-205ENST00000588642 HSP90B1P14625 803 aaKnown RBP17.5■□□□□ 0.39
NLE1-205ENST00000588642 FOXO4P98177 505 aa17.5■□□□□ 0.39
NLE1-205ENST00000588642 NLGN1Q8N2Q7 840 aa17.5■□□□□ 0.39
NLE1-205ENST00000588642 NYXQ9GZU5 481 aa17.5■□□□□ 0.39
NLE1-205ENST00000588642 KDM2BQ8NHM5 1336 aa17.49■□□□□ 0.39
NLE1-205ENST00000588642 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
NLE1-205ENST00000588642 NPHP1O15259 732 aa17.49■□□□□ 0.39
NLE1-205ENST00000588642 MTX1Q13505 466 aa17.49■□□□□ 0.39
NLE1-205ENST00000588642 LMBR1LQ6UX01 489 aa17.49■□□□□ 0.39
NLE1-205ENST00000588642 TPTE2Q6XPS3 522 aa17.49■□□□□ 0.39
NLE1-205ENST00000588642 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
NLE1-205ENST00000588642 TM4SF1P30408 202 aa17.48■□□□□ 0.39
NLE1-205ENST00000588642 NUTM1Q86Y26 1132 aa17.48■□□□□ 0.39
NLE1-205ENST00000588642 SSH3Q8TE77 659 aa17.48■□□□□ 0.39
NLE1-205ENST00000588642 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
NLE1-205ENST00000588642 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
NLE1-205ENST00000588642 PDE8AO60658 829 aa17.47■□□□□ 0.39
NLE1-205ENST00000588642 POLA2Q14181 598 aa17.47■□□□□ 0.39
NLE1-205ENST00000588642 RABL6Q3YEC7 729 aaPredicted RBP17.47■□□□□ 0.39
NLE1-205ENST00000588642 ERFEQ4G0M1 354 aa17.47■□□□□ 0.39
NLE1-205ENST00000588642 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
NLE1-205ENST00000588642 DCTPP1Q9H773 170 aa17.47■□□□□ 0.39
NLE1-205ENST00000588642 UBR3Q6ZT12 1888 aa17.47■□□□□ 0.39
NLE1-205ENST00000588642 CARMIL3Q8ND23 1372 aa17.46■□□□□ 0.39
NLE1-205ENST00000588642 NUP98P52948 1817 aa17.46■□□□□ 0.39
NLE1-205ENST00000588642 SCN7AQ01118 1682 aa17.45■□□□□ 0.38
NLE1-205ENST00000588642 SOCS7O14512 581 aa17.45■□□□□ 0.38
NLE1-205ENST00000588642 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
NLE1-205ENST00000588642 SERPINB2P05120 415 aa17.45■□□□□ 0.38
NLE1-205ENST00000588642 CTSWP56202 376 aa17.45■□□□□ 0.38
NLE1-205ENST00000588642 MSL1Q68DK7 614 aa17.45■□□□□ 0.38
NLE1-205ENST00000588642 SMC5Q8IY18 1101 aa17.45■□□□□ 0.38
NLE1-205ENST00000588642 BCORQ6W2J9 1755 aa17.45■□□□□ 0.38
NLE1-205ENST00000588642 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
NLE1-205ENST00000588642 CSF1RP07333 972 aa17.44■□□□□ 0.38
NLE1-205ENST00000588642 SLC10A5Q5PT55 438 aa17.44■□□□□ 0.38
NLE1-205ENST00000588642 CCDC24Q8N4L8 307 aa17.44■□□□□ 0.38
NLE1-205ENST00000588642 CNBD1Q8NA66 436 aa17.44■□□□□ 0.38
NLE1-205ENST00000588642 CCDC85AQ96PX6 553 aaPredicted RBP17.44■□□□□ 0.38
NLE1-205ENST00000588642 APBB1O00213 710 aa17.43■□□□□ 0.38
NLE1-205ENST00000588642 DDR1Q08345 913 aa17.43■□□□□ 0.38
NLE1-205ENST00000588642 ANKRD45Q5TZF3 282 aa17.43■□□□□ 0.38
NLE1-205ENST00000588642 TTLL11Q8NHH1 800 aa17.43■□□□□ 0.38
NLE1-205ENST00000588642 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
NLE1-205ENST00000588642 EXOC6BQ9Y2D4 811 aa17.43■□□□□ 0.38
NLE1-205ENST00000588642 PARP3Q9Y6F1 533 aa17.43■□□□□ 0.38
NLE1-205ENST00000588642 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
NLE1-205ENST00000588642 POLRMTO00411 1230 aaKnown RBP17.42■□□□□ 0.38
NLE1-205ENST00000588642 MMP10P09238 476 aa17.42■□□□□ 0.38
NLE1-205ENST00000588642 ST5P78524 1137 aa17.42■□□□□ 0.38
NLE1-205ENST00000588642 OS9Q13438 667 aaPredicted RBP17.42■□□□□ 0.38
NLE1-205ENST00000588642 CCDC57Q2TAC2 916 aa17.42■□□□□ 0.38
NLE1-205ENST00000588642 HSP90AB4PQ58FF6 505 aa17.42■□□□□ 0.38
NLE1-205ENST00000588642 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms