RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 ANKRD31Q8N7Z5 1873 aa22.07■■□□□ 1.12
DNMT1-212ENST00000587197 BRPF1P55201 1214 aaPredicted RBP22.06■■□□□ 1.12
DNMT1-212ENST00000587197 SSH1Q8WYL5 1049 aa22.06■■□□□ 1.12
DNMT1-212ENST00000587197 CACNA1FO60840 1977 aa22.06■■□□□ 1.12
DNMT1-212ENST00000587197 FAM177BA6PVY3 158 aa22.05■■□□□ 1.12
DNMT1-212ENST00000587197 SRGNP10124 158 aa22.05■■□□□ 1.12
DNMT1-212ENST00000587197 PARP10Q53GL7 1025 aa22.05■■□□□ 1.12
DNMT1-212ENST00000587197 KSR2Q6VAB6 950 aa22.05■■□□□ 1.12
DNMT1-212ENST00000587197 RIC3Q7Z5B4 369 aa22.05■■□□□ 1.12
DNMT1-212ENST00000587197 MRPL50Q8N5N7 158 aaKnown RBP22.05■■□□□ 1.12
DNMT1-212ENST00000587197 TRIM28Q13263 835 aaKnown RBP22.04■■□□□ 1.12
DNMT1-212ENST00000587197 IBTKQ9P2D0 1353 aaPredicted RBP22.03■■□□□ 1.12
DNMT1-212ENST00000587197 RARSP54136 660 aaKnown RBP22.03■■□□□ 1.12
DNMT1-212ENST00000587197 SOGA3Q5TF21 947 aa22.03■■□□□ 1.12
DNMT1-212ENST00000587197 ISCA1Q9BUE6 129 aa22.03■■□□□ 1.12
DNMT1-212ENST00000587197 PI4KAP2A4QPH2 592 aa22.02■■□□□ 1.12
DNMT1-212ENST00000587197 C21orf2O43822 256 aa22.02■■□□□ 1.12
DNMT1-212ENST00000587197 NPR1P16066 1061 aa22.02■■□□□ 1.12
DNMT1-212ENST00000587197 LMNB1P20700 586 aa22.02■■□□□ 1.12
DNMT1-212ENST00000587197 FKBP5Q13451 457 aaPredicted RBP22.02■■□□□ 1.12
DNMT1-212ENST00000587197 PI4KAP1Q8N8J0 262 aa22.02■■□□□ 1.12
DNMT1-212ENST00000587197 METTL22Q9BUU2 404 aaPredicted RBP22.02■■□□□ 1.12
DNMT1-212ENST00000587197 UBN2Q6ZU65 1347 aa22.02■■□□□ 1.12
DNMT1-212ENST00000587197 NUP98P52948 1817 aa22.01■■□□□ 1.11
DNMT1-212ENST00000587197 KLRG2A4D1S0 409 aaPredicted RBP22.01■■□□□ 1.11
DNMT1-212ENST00000587197 PPP1R42Q7Z4L9 355 aa22.01■■□□□ 1.11
DNMT1-212ENST00000587197 MAP3K2Q9Y2U5 619 aa22.01■■□□□ 1.11
DNMT1-212ENST00000587197 KDM2BQ8NHM5 1336 aa22.01■■□□□ 1.11
DNMT1-212ENST00000587197 ZC3H4Q9UPT8 1303 aaKnown RBP22.01■■□□□ 1.11
DNMT1-212ENST00000587197 GPTP24298 496 aa22■■□□□ 1.11
DNMT1-212ENST00000587197 RASSF7Q02833 373 aa22■■□□□ 1.11
DNMT1-212ENST00000587197 PRPF40BQ6NWY9 871 aaKnown RBP22■■□□□ 1.11
DNMT1-212ENST00000587197 NLRP10Q86W26 655 aa22■■□□□ 1.11
DNMT1-212ENST00000587197 SMC4Q9NTJ3 1288 aa22■■□□□ 1.11
DNMT1-212ENST00000587197 ZNF219Q9P2Y4 722 aaPredicted RBP22■■□□□ 1.11
DNMT1-212ENST00000587197 PTPRCP08575 1304 aa22■■□□□ 1.11
DNMT1-212ENST00000587197 COL11A2P13942 1736 aaPredicted RBP22■■□□□ 1.11
DNMT1-212ENST00000587197 ALDH1B1P30837 517 aa21.99■■□□□ 1.11
DNMT1-212ENST00000587197 SUSD4Q5VX71 490 aa21.99■■□□□ 1.11
DNMT1-212ENST00000587197 DNAAF4Q8WXU2 420 aa21.99■■□□□ 1.11
DNMT1-212ENST00000587197 RNF123Q5XPI4 1314 aa21.99■■□□□ 1.11
DNMT1-212ENST00000587197 SBF1O95248 1867 aa21.97■■□□□ 1.11
DNMT1-212ENST00000587197 NTSR2O95665 410 aa21.97■■□□□ 1.11
DNMT1-212ENST00000587197 NEXNQ0ZGT2 675 aa21.97■■□□□ 1.11
DNMT1-212ENST00000587197 NUTM1Q86Y26 1132 aa21.97■■□□□ 1.11
DNMT1-212ENST00000587197 CCDC191Q8NCU4 936 aa21.97■■□□□ 1.11
DNMT1-212ENST00000587197 MYD88Q99836 296 aa21.97■■□□□ 1.11
DNMT1-212ENST00000587197 UTP14AQ9BVJ6 771 aaKnown RBP21.97■■□□□ 1.11
DNMT1-212ENST00000587197 ATP5J2-PTCD1G3V325 749 aa21.96■■□□□ 1.11
DNMT1-212ENST00000587197 NFKBIEO00221 500 aa21.96■■□□□ 1.11
DNMT1-212ENST00000587197 KIF3CO14782 793 aa21.96■■□□□ 1.11
DNMT1-212ENST00000587197 ERFEQ4G0M1 354 aa21.96■■□□□ 1.11
DNMT1-212ENST00000587197 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
DNMT1-212ENST00000587197 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
DNMT1-212ENST00000587197 TAOK3Q9H2K8 898 aa21.96■■□□□ 1.11
DNMT1-212ENST00000587197 LTBP3Q9NS15 1303 aa21.95■■□□□ 1.1
DNMT1-212ENST00000587197 IGKV5-2P06315 115 aa21.94■■□□□ 1.1
DNMT1-212ENST00000587197 CCDC93Q567U6 631 aa21.94■■□□□ 1.1
DNMT1-212ENST00000587197 C16orf71Q8IYS4 520 aaPredicted RBP21.94■■□□□ 1.1
DNMT1-212ENST00000587197 ARHGAP45Q92619 1136 aa21.94■■□□□ 1.1
DNMT1-212ENST00000587197 RPGRQ92834 1020 aaKnown RBP21.94■■□□□ 1.1
DNMT1-212ENST00000587197 KIF16BQ96L93 1317 aa21.94■■□□□ 1.1
DNMT1-212ENST00000587197 ARFGEF2Q9Y6D5 1785 aa21.94■■□□□ 1.1
DNMT1-212ENST00000587197 F6X3S4 739 aa21.93■■□□□ 1.1
DNMT1-212ENST00000587197 CRY2Q49AN0 593 aa21.93■■□□□ 1.1
DNMT1-212ENST00000587197 RIC1Q4ADV7 1423 aa21.93■■□□□ 1.1
DNMT1-212ENST00000587197 SLC10A5Q5PT55 438 aa21.93■■□□□ 1.1
DNMT1-212ENST00000587197 DPY19L2Q6NUT2 758 aa21.93■■□□□ 1.1
DNMT1-212ENST00000587197 SLX4Q8IY92 1834 aa21.93■■□□□ 1.1
DNMT1-212ENST00000587197 LINS1Q8NG48 757 aa21.93■■□□□ 1.1
DNMT1-212ENST00000587197 NMRK2Q9NPI5 230 aa21.93■■□□□ 1.1
DNMT1-212ENST00000587197 CWC25Q9NXE8 425 aaPredicted RBP21.93■■□□□ 1.1
DNMT1-212ENST00000587197 TRMT112Q9UI30 125 aaKnown RBP21.93■■□□□ 1.1
DNMT1-212ENST00000587197 ANKRD36CQ5JPF3 1778 aa21.92■■□□□ 1.1
DNMT1-212ENST00000587197 ABCC12Q96J65 1359 aa21.92■■□□□ 1.1
DNMT1-212ENST00000587197 NEURL1BA8MQ27 555 aa21.92■■□□□ 1.1
DNMT1-212ENST00000587197 TOMM70O94826 608 aa21.92■■□□□ 1.1
DNMT1-212ENST00000587197 NLRP3Q96P20 1036 aa21.92■■□□□ 1.1
DNMT1-212ENST00000587197 CACNA1SQ13698 1873 aa21.92■■□□□ 1.1
DNMT1-212ENST00000587197 SH3TC1Q8TE82 1336 aa21.91■■□□□ 1.1
DNMT1-212ENST00000587197 BEND3Q5T5X7 828 aa21.91■■□□□ 1.1
DNMT1-212ENST00000587197 RTKN2Q8IZC4 609 aa21.91■■□□□ 1.1
DNMT1-212ENST00000587197 ZBTB38Q8NAP3 1195 aaPredicted RBP21.91■■□□□ 1.1
DNMT1-212ENST00000587197 C7orf43Q8WVR3 580 aa21.91■■□□□ 1.1
DNMT1-212ENST00000587197 API5Q9BZZ5 524 aaKnown RBP21.91■■□□□ 1.1
DNMT1-212ENST00000587197 NOB1Q9ULX3 412 aaKnown RBP21.91■■□□□ 1.1
DNMT1-212ENST00000587197 FER1L6Q2WGJ9 1857 aa21.91■■□□□ 1.1
DNMT1-212ENST00000587197 GLTPD2A6NH11 291 aa21.9■■□□□ 1.1
DNMT1-212ENST00000587197 IPO8O15397 1037 aaKnown RBP21.9■■□□□ 1.1
DNMT1-212ENST00000587197 BCAR3O75815 825 aa21.9■■□□□ 1.1
DNMT1-212ENST00000587197 PRELPP51888 382 aa21.9■■□□□ 1.1
DNMT1-212ENST00000587197 RBM17Q96I25 401 aaKnown RBP21.9■■□□□ 1.1
DNMT1-212ENST00000587197 ALDH1L1O75891 902 aa21.89■■□□□ 1.09
DNMT1-212ENST00000587197 PCCAP05165 728 aaPredicted RBP21.89■■□□□ 1.09
DNMT1-212ENST00000587197 HOXA10P31260 410 aaPredicted RBP21.89■■□□□ 1.09
DNMT1-212ENST00000587197 CC2D2BQ6DHV5 1058 aa21.89■■□□□ 1.09
DNMT1-212ENST00000587197 CCDC88AQ3V6T2 1871 aa21.89■■□□□ 1.09
DNMT1-212ENST00000587197 HSP90B1P14625 803 aaKnown RBP21.88■■□□□ 1.09
DNMT1-212ENST00000587197 GCKRQ14397 625 aa21.88■■□□□ 1.09
DNMT1-212ENST00000587197 CWF19L2Q2TBE0 894 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms