RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KDM3BQ7LBC6 1761 aa15.8■□□□□ 0.12
BRCA1-225ENST00000586385 IBTKQ9P2D0 1353 aaPredicted RBP15.8■□□□□ 0.12
BRCA1-225ENST00000586385 RASSF10A6NK89 507 aa15.8■□□□□ 0.12
BRCA1-225ENST00000586385 GPTP24298 496 aa15.8■□□□□ 0.12
BRCA1-225ENST00000586385 FMR1Q06787 632 aaKnown RBP eCLIP15.8■□□□□ 0.12
BRCA1-225ENST00000586385 ZNF34Q8IZ26 560 aa15.8■□□□□ 0.12
BRCA1-225ENST00000586385 PRDM10Q9NQV6 1147 aa15.8■□□□□ 0.12
BRCA1-225ENST00000586385 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
BRCA1-225ENST00000586385 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
BRCA1-225ENST00000586385 NTSR2O95665 410 aa15.79■□□□□ 0.12
BRCA1-225ENST00000586385 GTF2E1P29083 439 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-225ENST00000586385 SCNN1DP51172 638 aa15.79■□□□□ 0.12
BRCA1-225ENST00000586385 PNMA8AQ86V59 439 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-225ENST00000586385 NYXQ9GZU5 481 aa15.79■□□□□ 0.12
BRCA1-225ENST00000586385 ZBTB3Q9H5J0 574 aa15.79■□□□□ 0.12
BRCA1-225ENST00000586385 MYL6BP14649 208 aa15.78■□□□□ 0.12
BRCA1-225ENST00000586385 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
BRCA1-225ENST00000586385 EPS15P42566 896 aa15.77■□□□□ 0.12
BRCA1-225ENST00000586385 CTCFP49711 727 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-225ENST00000586385 PDIA6Q15084 440 aa15.77■□□□□ 0.12
BRCA1-225ENST00000586385 CC2D2BQ6DHV5 1058 aa15.77■□□□□ 0.12
BRCA1-225ENST00000586385 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.12
BRCA1-225ENST00000586385 CRAMP1Q96RY5 1269 aa15.77■□□□□ 0.12
BRCA1-225ENST00000586385 LBX1P52954 281 aa15.76■□□□□ 0.11
BRCA1-225ENST00000586385 PROSER3Q2NL68 480 aa15.76■□□□□ 0.11
BRCA1-225ENST00000586385 DEFB115Q30KQ5 88 aa15.76■□□□□ 0.11
BRCA1-225ENST00000586385 GIGYF2Q6Y7W6 1299 aaKnown RBP15.76■□□□□ 0.11
BRCA1-225ENST00000586385 KIF6Q6ZMV9 814 aa15.76■□□□□ 0.11
BRCA1-225ENST00000586385 JDP2Q8WYK2 163 aa15.76■□□□□ 0.11
BRCA1-225ENST00000586385 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
BRCA1-225ENST00000586385 DDX21Q9NR30 783 aaKnown RBP eCLIP15.76■□□□□ 0.11
BRCA1-225ENST00000586385 GJA3Q9Y6H8 435 aa15.76■□□□□ 0.11
BRCA1-225ENST00000586385 NUP98P52948 1817 aa15.75■□□□□ 0.11
BRCA1-225ENST00000586385 DLG5Q8TDM6 1919 aa15.75■□□□□ 0.11
BRCA1-225ENST00000586385 TCERG1O14776 1098 aaKnown RBP15.75■□□□□ 0.11
BRCA1-225ENST00000586385 HSPA8P11142 646 aaKnown RBP15.75■□□□□ 0.11
BRCA1-225ENST00000586385 EIF6P56537 245 aaKnown RBP15.75■□□□□ 0.11
BRCA1-225ENST00000586385 PPEF1O14829 653 aaPredicted RBP15.74■□□□□ 0.11
BRCA1-225ENST00000586385 CST9Q5W186 159 aa15.74■□□□□ 0.11
BRCA1-225ENST00000586385 LARGE2Q8N3Y3 721 aa15.74■□□□□ 0.11
BRCA1-225ENST00000586385 ERBB4Q15303 1308 aa15.73■□□□□ 0.11
BRCA1-225ENST00000586385 WDR33Q9C0J8 1336 aaKnown RBP15.73■□□□□ 0.11
BRCA1-225ENST00000586385 TRAF5O00463 557 aa15.73■□□□□ 0.11
BRCA1-225ENST00000586385 ANXA1P04083 346 aa15.73■□□□□ 0.11
BRCA1-225ENST00000586385 SLC10A5Q5PT55 438 aa15.73■□□□□ 0.11
BRCA1-225ENST00000586385 RBM17Q96I25 401 aaKnown RBP15.73■□□□□ 0.11
BRCA1-225ENST00000586385 AOC3Q16853 763 aa15.72■□□□□ 0.11
BRCA1-225ENST00000586385 AIDAQ96BJ3 306 aa15.72■□□□□ 0.11
BRCA1-225ENST00000586385 ABT1Q9ULW3 272 aaKnown RBP15.72■□□□□ 0.11
BRCA1-225ENST00000586385 ABCC4O15439 1325 aa15.71■□□□□ 0.11
BRCA1-225ENST00000586385 GRIPAP1Q4V328 841 aa15.71■□□□□ 0.11
BRCA1-225ENST00000586385 NIM1KQ8IY84 436 aa15.71■□□□□ 0.11
BRCA1-225ENST00000586385 RTFDC1Q9BY42 306 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-225ENST00000586385 ATP6V0A2Q9Y487 856 aa15.71■□□□□ 0.11
BRCA1-225ENST00000586385 THSD7BQ9C0I4 1608 aa15.71■□□□□ 0.11
BRCA1-225ENST00000586385 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
BRCA1-225ENST00000586385 LMOD1P29536 600 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-225ENST00000586385 CXCL9Q07325 125 aa15.7■□□□□ 0.1
BRCA1-225ENST00000586385 PARP10Q53GL7 1025 aa15.7■□□□□ 0.1
BRCA1-225ENST00000586385 USP50Q70EL3 339 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-225ENST00000586385 PPP1R42Q7Z4L9 355 aa15.7■□□□□ 0.1
BRCA1-225ENST00000586385 GPRC5DQ9NZD1 345 aa15.7■□□□□ 0.1
BRCA1-225ENST00000586385 EIF2S2P20042 333 aaKnown RBP15.69■□□□□ 0.1
BRCA1-225ENST00000586385 CYP4F22Q6NT55 531 aa15.69■□□□□ 0.1
BRCA1-225ENST00000586385 CAPNS2Q96L46 248 aa15.69■□□□□ 0.1
BRCA1-225ENST00000586385 NLRP3Q96P20 1036 aa15.69■□□□□ 0.1
BRCA1-225ENST00000586385 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
BRCA1-225ENST00000586385 TSPYL4Q9UJ04 414 aa15.69■□□□□ 0.1
BRCA1-225ENST00000586385 NEFMP07197 916 aa15.68■□□□□ 0.1
BRCA1-225ENST00000586385 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-225ENST00000586385 MAP2K1Q02750 393 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-225ENST00000586385 NLRP10Q86W26 655 aa15.68■□□□□ 0.1
BRCA1-225ENST00000586385 ZNRF3Q9ULT6 936 aa15.68■□□□□ 0.1
BRCA1-225ENST00000586385 TLL2Q9Y6L7 1015 aa15.68■□□□□ 0.1
BRCA1-225ENST00000586385 GMPSP49915 693 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-225ENST00000586385 HIRAP54198 1017 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-225ENST00000586385 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
BRCA1-225ENST00000586385 ABHD8Q96I13 439 aa15.67■□□□□ 0.1
BRCA1-225ENST00000586385 VPS33BQ9H267 617 aa15.67■□□□□ 0.1
BRCA1-225ENST00000586385 ADARB2Q9NS39 739 aaKnown RBP15.67■□□□□ 0.1
BRCA1-225ENST00000586385 MAPK8IP3Q9UPT6 1336 aa15.67■□□□□ 0.1
BRCA1-225ENST00000586385 SHTN1A0MZ66 631 aa15.66■□□□□ 0.1
BRCA1-225ENST00000586385 RIPK4P57078 832 aa15.66■□□□□ 0.1
BRCA1-225ENST00000586385 COPS6Q7L5N1 327 aa15.66■□□□□ 0.1
BRCA1-225ENST00000586385 SP8Q8IXZ3 490 aa15.66■□□□□ 0.1
BRCA1-225ENST00000586385 XAGE3Q8WTP9 111 aa15.66■□□□□ 0.1
BRCA1-225ENST00000586385 NECTIN2Q92692 538 aa15.66■□□□□ 0.1
BRCA1-225ENST00000586385 PGAP2Q9UHJ9 254 aa15.66■□□□□ 0.1
BRCA1-225ENST00000586385 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
BRCA1-225ENST00000586385 YDJCA8MPS7 323 aa15.65■□□□□ 0.1
BRCA1-225ENST00000586385 AOC2O75106 756 aa15.65■□□□□ 0.1
BRCA1-225ENST00000586385 BBOX1O75936 387 aa15.65■□□□□ 0.1
BRCA1-225ENST00000586385 TMPOP42166 694 aaKnown RBP15.65■□□□□ 0.1
BRCA1-225ENST00000586385 KIAA2012Q0VF49 1180 aa15.65■□□□□ 0.1
BRCA1-225ENST00000586385 TRPM4Q8TD43 1214 aa15.65■□□□□ 0.1
BRCA1-225ENST00000586385 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
BRCA1-225ENST00000586385 GPR101Q96P66 508 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-225ENST00000586385 GLIS2Q9BZE0 524 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-225ENST00000586385 RAD17O75943 681 aa15.64■□□□□ 0.09
BRCA1-225ENST00000586385 TCIRG1Q13488 830 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms