RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 XAGE3Q8WTP9 111 aa24.24■■□□□ 1.47
ATG4D-203ENST00000585752 NLRP3Q96P20 1036 aa24.24■■□□□ 1.47
ATG4D-203ENST00000585752 UTP14AQ9BVJ6 771 aaKnown RBP24.24■■□□□ 1.47
ATG4D-203ENST00000585752 KRT24Q2M2I5 525 aa24.23■■□□□ 1.47
ATG4D-203ENST00000585752 RBM17Q96I25 401 aaKnown RBP24.23■■□□□ 1.47
ATG4D-203ENST00000585752 UBN2Q6ZU65 1347 aa24.23■■□□□ 1.47
ATG4D-203ENST00000585752 APLP1P51693 650 aa24.22■■□□□ 1.47
ATG4D-203ENST00000585752 PRELPP51888 382 aa24.22■■□□□ 1.47
ATG4D-203ENST00000585752 DBF4Q9UBU7 674 aaPredicted RBP24.22■■□□□ 1.47
ATG4D-203ENST00000585752 MBIPQ9NS73 344 aa24.21■■□□□ 1.47
ATG4D-203ENST00000585752 CHPF2Q9P2E5 772 aa24.21■■□□□ 1.47
ATG4D-203ENST00000585752 ABCC12Q96J65 1359 aa24.2■■□□□ 1.46
ATG4D-203ENST00000585752 FKBP4Q02790 459 aaKnown RBP eCLIP24.2■■□□□ 1.46
ATG4D-203ENST00000585752 FSTL1Q12841 308 aa24.2■■□□□ 1.46
ATG4D-203ENST00000585752 DUSP27Q5VZP5 1158 aa24.2■■□□□ 1.46
ATG4D-203ENST00000585752 MIER1Q8N108 512 aa24.2■■□□□ 1.46
ATG4D-203ENST00000585752 CHMP4AQ9BY43 222 aa24.2■■□□□ 1.46
ATG4D-203ENST00000585752 IFT57Q9NWB7 429 aa24.2■■□□□ 1.46
ATG4D-203ENST00000585752 NTSR2O95665 410 aa24.19■■□□□ 1.46
ATG4D-203ENST00000585752 CRY2Q49AN0 593 aa24.19■■□□□ 1.46
ATG4D-203ENST00000585752 CC2D2BQ6DHV5 1058 aa24.19■■□□□ 1.46
ATG4D-203ENST00000585752 LRP10Q7Z4F1 713 aa24.19■■□□□ 1.46
ATG4D-203ENST00000585752 SMC1BQ8NDV3 1235 aa24.19■■□□□ 1.46
ATG4D-203ENST00000585752 HYPKQ9NX55 129 aa24.19■■□□□ 1.46
ATG4D-203ENST00000585752 TCIRG1Q13488 830 aa24.18■■□□□ 1.46
ATG4D-203ENST00000585752 C7orf43Q8WVR3 580 aa24.18■■□□□ 1.46
ATG4D-203ENST00000585752 RIC1Q4ADV7 1423 aa24.18■■□□□ 1.46
ATG4D-203ENST00000585752 RNF123Q5XPI4 1314 aa24.17■■□□□ 1.46
ATG4D-203ENST00000585752 GRIPAP1Q4V328 841 aa24.17■■□□□ 1.46
ATG4D-203ENST00000585752 ANKRD13DQ6ZTN6 518 aa24.17■■□□□ 1.46
ATG4D-203ENST00000585752 TRMT112Q9UI30 125 aaKnown RBP24.17■■□□□ 1.46
ATG4D-203ENST00000585752 TCERG1O14776 1098 aaKnown RBP24.15■■□□□ 1.46
ATG4D-203ENST00000585752 HOXA10P31260 410 aaPredicted RBP24.15■■□□□ 1.46
ATG4D-203ENST00000585752 SYNE4Q8N205 404 aa24.15■■□□□ 1.46
ATG4D-203ENST00000585752 PLBD2Q8NHP8 589 aa24.15■■□□□ 1.46
ATG4D-203ENST00000585752 CRAMP1Q96RY5 1269 aa24.15■■□□□ 1.46
ATG4D-203ENST00000585752 ZNF277Q9NRM2 450 aaPredicted RBP24.15■■□□□ 1.46
ATG4D-203ENST00000585752 WDR90Q96KV7 1748 aa24.15■■□□□ 1.46
ATG4D-203ENST00000585752 ELL2O00472 640 aaPredicted RBP24.14■■□□□ 1.45
ATG4D-203ENST00000585752 PPEF1O14829 653 aaPredicted RBP24.14■■□□□ 1.45
ATG4D-203ENST00000585752 OLFM4Q6UX06 510 aa24.14■■□□□ 1.45
ATG4D-203ENST00000585752 NLRP10Q86W26 655 aa24.14■■□□□ 1.45
ATG4D-203ENST00000585752 JDP2Q8WYK2 163 aa24.14■■□□□ 1.45
ATG4D-203ENST00000585752 SH3TC1Q8TE82 1336 aa24.13■■□□□ 1.45
ATG4D-203ENST00000585752 ZNF853P0CG23 659 aa24.13■■□□□ 1.45
ATG4D-203ENST00000585752 IARSP41252 1262 aaKnown RBP24.13■■□□□ 1.45
ATG4D-203ENST00000585752 SLC10A5Q5PT55 438 aa24.13■■□□□ 1.45
ATG4D-203ENST00000585752 RIC3Q7Z5B4 369 aa24.13■■□□□ 1.45
ATG4D-203ENST00000585752 SALL2Q9Y467 1007 aaPredicted RBP24.13■■□□□ 1.45
ATG4D-203ENST00000585752 DDNO94850 711 aaPredicted RBP24.12■■□□□ 1.45
ATG4D-203ENST00000585752 GOLGA2Q08379 1002 aa24.12■■□□□ 1.45
ATG4D-203ENST00000585752 IQCA1LA6NCM1 817 aa24.11■■□□□ 1.45
ATG4D-203ENST00000585752 DDX46Q7L014 1031 aaKnown RBP24.11■■□□□ 1.45
ATG4D-203ENST00000585752 PSMD1Q99460 953 aa24.11■■□□□ 1.45
ATG4D-203ENST00000585752 LAMB2P55268 1798 aa24.11■■□□□ 1.45
ATG4D-203ENST00000585752 SCN4AP35499 1836 aa24.1■■□□□ 1.45
ATG4D-203ENST00000585752 HCLS1P14317 486 aaPredicted RBP24.09■■□□□ 1.45
ATG4D-203ENST00000585752 CCDC27Q2M243 656 aa24.09■■□□□ 1.45
ATG4D-203ENST00000585752 CCDC30Q5VVM6 783 aa24.09■■□□□ 1.45
ATG4D-203ENST00000585752 DDX58O95786 925 aaKnown RBP24.08■■□□□ 1.45
ATG4D-203ENST00000585752 EIF6P56537 245 aaKnown RBP24.08■■□□□ 1.45
ATG4D-203ENST00000585752 NCBP3Q53F19 620 aaKnown RBP24.08■■□□□ 1.45
ATG4D-203ENST00000585752 ATP5J2-PTCD1G3V325 749 aa24.07■■□□□ 1.44
ATG4D-203ENST00000585752 C3orf67Q6ZVT6 689 aa24.07■■□□□ 1.44
ATG4D-203ENST00000585752 LARGE2Q8N3Y3 721 aa24.07■■□□□ 1.44
ATG4D-203ENST00000585752 SUPT20HQ8NEM7 779 aa24.07■■□□□ 1.44
ATG4D-203ENST00000585752 ZNF428Q96B54 188 aa24.07■■□□□ 1.44
ATG4D-203ENST00000585752 BBOX1O75936 387 aa24.06■■□□□ 1.44
ATG4D-203ENST00000585752 WWC1Q8IX03 1113 aa24.06■■□□□ 1.44
ATG4D-203ENST00000585752 STK31Q9BXU1 1019 aa24.06■■□□□ 1.44
ATG4D-203ENST00000585752 ABCC4O15439 1325 aa24.06■■□□□ 1.44
ATG4D-203ENST00000585752 POTECB2RU33 542 aa24.05■■□□□ 1.44
ATG4D-203ENST00000585752 HSP90B1P14625 803 aaKnown RBP24.05■■□□□ 1.44
ATG4D-203ENST00000585752 C8orf58Q8NAV2 365 aa24.05■■□□□ 1.44
ATG4D-203ENST00000585752 ATP6V0A2Q9Y487 856 aa24.05■■□□□ 1.44
ATG4D-203ENST00000585752 FAM89AQ96GI7 184 aa24.04■■□□□ 1.44
ATG4D-203ENST00000585752 ISCA1Q9BUE6 129 aa24.04■■□□□ 1.44
ATG4D-203ENST00000585752 RTL5Q5HYW3 569 aaPredicted RBP24.03■■□□□ 1.44
ATG4D-203ENST00000585752 NIM1KQ8IY84 436 aa24.03■■□□□ 1.44
ATG4D-203ENST00000585752 PHAXQ9H814 394 aaKnown RBP24.03■■□□□ 1.44
ATG4D-203ENST00000585752 GJA3Q9Y6H8 435 aa24.03■■□□□ 1.44
ATG4D-203ENST00000585752 TAF1P21675 1872 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 FZD9O00144 591 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 PPIP5K2O43314 1243 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 GRAPQ13588 217 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 CHADLQ6NUI6 762 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 DPP8Q6V1X1 898 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-203ENST00000585752 SP8Q8IXZ3 490 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 GRAPLQ8TC17 118 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-203ENST00000585752 TSR2Q969E8 191 aaKnown RBP24.02■■□□□ 1.44
ATG4D-203ENST00000585752 MYD88Q99836 296 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 HACL1Q9UJ83 578 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 CLEC11AQ9Y240 323 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 ZNF541Q9H0D2 1346 aa24.02■■□□□ 1.44
ATG4D-203ENST00000585752 DDX60Q8IY21 1712 aaKnown RBP24.01■■□□□ 1.43
ATG4D-203ENST00000585752 LMOD1P29536 600 aaPredicted RBP24.01■■□□□ 1.43
ATG4D-203ENST00000585752 EAPPQ56P03 285 aaPredicted RBP24.01■■□□□ 1.43
ATG4D-203ENST00000585752 TMC4Q7Z404 712 aa24.01■■□□□ 1.43
ATG4D-203ENST00000585752 GPC2Q8N158 579 aa24.01■■□□□ 1.43
ATG4D-203ENST00000585752 MPNDQ8N594 471 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms