RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 NUTM1Q86Y26 1132 aa31.15■■■□□ 2.58
MIR3960-201ENST00000583311 CCDC24Q8N4L8 307 aa31.15■■■□□ 2.58
MIR3960-201ENST00000583311 A0A0G2JLW4 131 aa31.14■■■□□ 2.58
MIR3960-201ENST00000583311 H0YIN7 160 aa31.14■■■□□ 2.58
MIR3960-201ENST00000583311 DPEP1P16444 411 aa31.14■■■□□ 2.58
MIR3960-201ENST00000583311 ERFEQ4G0M1 354 aa31.14■■■□□ 2.58
MIR3960-201ENST00000583311 SH3TC1Q8TE82 1336 aa31.14■■■□□ 2.58
MIR3960-201ENST00000583311 BRPF1P55201 1214 aaPredicted RBP31.13■■■□□ 2.57
MIR3960-201ENST00000583311 C2CD5Q86YS7 1000 aa31.13■■■□□ 2.57
MIR3960-201ENST00000583311 CWC25Q9NXE8 425 aaPredicted RBP31.13■■■□□ 2.57
MIR3960-201ENST00000583311 RIC1Q4ADV7 1423 aa31.13■■■□□ 2.57
MIR3960-201ENST00000583311 KIAA1551Q9HCM1 1747 aa31.12■■■□□ 2.57
MIR3960-201ENST00000583311 YTHDC1Q96MU7 727 aaKnown RBP31.12■■■□□ 2.57
MIR3960-201ENST00000583311 N4BP2Q86UW6 1770 aaPredicted RBP31.11■■■□□ 2.57
MIR3960-201ENST00000583311 ANKRD31Q8N7Z5 1873 aa31.11■■■□□ 2.57
MIR3960-201ENST00000583311 KIF16BQ96L93 1317 aa31.1■■■□□ 2.57
MIR3960-201ENST00000583311 CHRNA5P30532 468 aa31.1■■■□□ 2.57
MIR3960-201ENST00000583311 LINS1Q8NG48 757 aa31.1■■■□□ 2.57
MIR3960-201ENST00000583311 PIM2Q9P1W9 311 aa31.1■■■□□ 2.57
MIR3960-201ENST00000583311 ABCC12Q96J65 1359 aa31.09■■■□□ 2.57
MIR3960-201ENST00000583311 HSP90B1P14625 803 aaKnown RBP31.09■■■□□ 2.57
MIR3960-201ENST00000583311 SLC10A5Q5PT55 438 aa31.09■■■□□ 2.57
MIR3960-201ENST00000583311 NEURL1BA8MQ27 555 aa31.08■■■□□ 2.57
MIR3960-201ENST00000583311 F6X3S4 739 aa31.08■■■□□ 2.57
MIR3960-201ENST00000583311 IGKV5-2P06315 115 aa31.08■■■□□ 2.57
MIR3960-201ENST00000583311 ZBTB38Q8NAP3 1195 aaPredicted RBP31.08■■■□□ 2.57
MIR3960-201ENST00000583311 KLRG2A4D1S0 409 aaPredicted RBP31.07■■■□□ 2.56
MIR3960-201ENST00000583311 KCNA3P22001 575 aa31.07■■■□□ 2.56
MIR3960-201ENST00000583311 GPR162Q16538 588 aa31.07■■■□□ 2.56
MIR3960-201ENST00000583311 PELP1Q8IZL8 1130 aaKnown RBP31.07■■■□□ 2.56
MIR3960-201ENST00000583311 NLRP3Q96P20 1036 aa31.07■■■□□ 2.56
MIR3960-201ENST00000583311 CWF19L2Q2TBE0 894 aaKnown RBP31.06■■■□□ 2.56
MIR3960-201ENST00000583311 PCCAP05165 728 aaPredicted RBP31.05■■■□□ 2.56
MIR3960-201ENST00000583311 SRGNP10124 158 aa31.05■■■□□ 2.56
MIR3960-201ENST00000583311 SLC4A10Q6U841 1118 aa31.05■■■□□ 2.56
MIR3960-201ENST00000583311 FAM89AQ96GI7 184 aa31.05■■■□□ 2.56
MIR3960-201ENST00000583311 MASTLQ96GX5 879 aa31.05■■■□□ 2.56
MIR3960-201ENST00000583311 NOB1Q9ULX3 412 aaKnown RBP31.05■■■□□ 2.56
MIR3960-201ENST00000583311 DLEC1Q9Y238 1755 aa31.05■■■□□ 2.56
MIR3960-201ENST00000583311 NPR1P16066 1061 aa31.04■■■□□ 2.56
MIR3960-201ENST00000583311 BEND3Q5T5X7 828 aa31.04■■■□□ 2.56
MIR3960-201ENST00000583311 STYK1Q6J9G0 422 aa31.04■■■□□ 2.56
MIR3960-201ENST00000583311 ZNF622Q969S3 477 aaKnown RBP eCLIP31.04■■■□□ 2.56
MIR3960-201ENST00000583311 API5Q9BZZ5 524 aaKnown RBP31.04■■■□□ 2.56
MIR3960-201ENST00000583311 IPO8O15397 1037 aaKnown RBP31.03■■■□□ 2.56
MIR3960-201ENST00000583311 DALRD3Q5D0E6 543 aaKnown RBP31.03■■■□□ 2.56
MIR3960-201ENST00000583311 GCKRQ14397 625 aa31.02■■■□□ 2.56
MIR3960-201ENST00000583311 TTLL6Q8N841 843 aa31.02■■■□□ 2.56
MIR3960-201ENST00000583311 ARHGAP45Q92619 1136 aa31.02■■■□□ 2.56
MIR3960-201ENST00000583311 RPGRQ92834 1020 aaKnown RBP31.02■■■□□ 2.56
MIR3960-201ENST00000583311 CNKSR1Q969H4 720 aa31.02■■■□□ 2.56
MIR3960-201ENST00000583311 SRCIN1Q9C0H9 1055 aa31.02■■■□□ 2.56
MIR3960-201ENST00000583311 BRCA1P38398 1863 aaKnown RBP31.01■■■□□ 2.56
MIR3960-201ENST00000583311 COL11A2P13942 1736 aaPredicted RBP31.01■■■□□ 2.56
MIR3960-201ENST00000583311 TNRC6CQ9HCJ0 1690 aaKnown RBP31.01■■■□□ 2.55
MIR3960-201ENST00000583311 IRS4O14654 1257 aaPredicted RBP31.01■■■□□ 2.55
MIR3960-201ENST00000583311 ALDH1L1O75891 902 aa31.01■■■□□ 2.55
MIR3960-201ENST00000583311 HCLS1P14317 486 aaPredicted RBP31.01■■■□□ 2.55
MIR3960-201ENST00000583311 CRY2Q49AN0 593 aa31.01■■■□□ 2.55
MIR3960-201ENST00000583311 BCS1LQ9Y276 419 aa31.01■■■□□ 2.55
MIR3960-201ENST00000583311 GRIN3BO60391 1043 aa31■■■□□ 2.55
MIR3960-201ENST00000583311 RTL5Q5HYW3 569 aaPredicted RBP31■■■□□ 2.55
MIR3960-201ENST00000583311 SYNE4Q8N205 404 aa31■■■□□ 2.55
MIR3960-201ENST00000583311 WWC3Q9ULE0 1092 aa31■■■□□ 2.55
MIR3960-201ENST00000583311 CDHR2Q9BYE9 1310 aa30.99■■■□□ 2.55
MIR3960-201ENST00000583311 BCAR3O75815 825 aa30.99■■■□□ 2.55
MIR3960-201ENST00000583311 ALDH1B1P30837 517 aa30.98■■■□□ 2.55
MIR3960-201ENST00000583311 RBM17Q96I25 401 aaKnown RBP30.98■■■□□ 2.55
MIR3960-201ENST00000583311 YBX3P16989 372 aaKnown RBP eCLIP30.97■■■□□ 2.55
MIR3960-201ENST00000583311 FRAT1Q92837 279 aaPredicted RBP30.97■■■□□ 2.55
MIR3960-201ENST00000583311 LAMB2P55268 1798 aa30.97■■■□□ 2.55
MIR3960-201ENST00000583311 H7C1W4 665 aa30.96■■■□□ 2.55
MIR3960-201ENST00000583311 DDX60Q8IY21 1712 aaKnown RBP30.95■■■□□ 2.55
MIR3960-201ENST00000583311 PDE8AO60658 829 aa30.95■■■□□ 2.55
MIR3960-201ENST00000583311 HOXA10P31260 410 aaPredicted RBP30.95■■■□□ 2.55
MIR3960-201ENST00000583311 UBE3BQ7Z3V4 1068 aa30.95■■■□□ 2.55
MIR3960-201ENST00000583311 CCT4P50991 539 aaKnown RBP30.94■■■□□ 2.54
MIR3960-201ENST00000583311 C9orf78Q9NZ63 289 aaPredicted RBP30.94■■■□□ 2.54
MIR3960-201ENST00000583311 SF3B3Q15393 1217 aaKnown RBP30.93■■■□□ 2.54
MIR3960-201ENST00000583311 ZKSCAN2Q63HK3 967 aa30.93■■■□□ 2.54
MIR3960-201ENST00000583311 ATF7IPQ6VMQ6 1270 aa30.93■■■□□ 2.54
MIR3960-201ENST00000583311 C3orf67Q6ZVT6 689 aa30.93■■■□□ 2.54
MIR3960-201ENST00000583311 JARID2Q92833 1246 aaPredicted RBP30.93■■■□□ 2.54
MIR3960-201ENST00000583311 ARFGEF1Q9Y6D6 1849 aa30.92■■■□□ 2.54
MIR3960-201ENST00000583311 GRM8O00222 908 aa30.92■■■□□ 2.54
MIR3960-201ENST00000583311 PRPF40BQ6NWY9 871 aaKnown RBP30.92■■■□□ 2.54
MIR3960-201ENST00000583311 DDX46Q7L014 1031 aaKnown RBP30.92■■■□□ 2.54
MIR3960-201ENST00000583311 CRAMP1Q96RY5 1269 aa30.92■■■□□ 2.54
MIR3960-201ENST00000583311 RCAN3Q9UKA8 241 aa30.92■■■□□ 2.54
MIR3960-201ENST00000583311 CCDC152Q4G0S7 254 aa30.9■■■□□ 2.54
MIR3960-201ENST00000583311 SOGA3Q5TF21 947 aa30.89■■■□□ 2.54
MIR3960-201ENST00000583311 TRIM27P14373 513 aa30.88■■■□□ 2.53
MIR3960-201ENST00000583311 CASP7P55210 303 aa30.88■■■□□ 2.53
MIR3960-201ENST00000583311 PLA2G12BQ9BX93 195 aa30.88■■■□□ 2.53
MIR3960-201ENST00000583311 CTSWP56202 376 aa30.87■■■□□ 2.53
MIR3960-201ENST00000583311 ABCC4O15439 1325 aa30.87■■■□□ 2.53
MIR3960-201ENST00000583311 CACNA1SQ13698 1873 aa30.85■■■□□ 2.53
MIR3960-201ENST00000583311 GOLGB1Q14789 3259 aaKnown RBP30.85■■■□□ 2.53
MIR3960-201ENST00000583311 UTYO14607 1347 aa30.84■■■□□ 2.53
MIR3960-201ENST00000583311 C21orf2O43822 256 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms