RNA–Protein interactions for RNA: ENST00000581850.1

LINC00473-203, long intergenic non-protein coding RNA 473, humanhuman

TSL 3 BASIC

Gene LINC00473, Length 929 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-203ENST00000581850 NPHP1O15259 732 aa20.75■□□□□ 0.91
LINC00473-203ENST00000581850 DDX58O95786 925 aaKnown RBP20.75■□□□□ 0.91
LINC00473-203ENST00000581850 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
LINC00473-203ENST00000581850 METTL22Q9BUU2 404 aaPredicted RBP20.75■□□□□ 0.91
LINC00473-203ENST00000581850 SLX4Q8IY92 1834 aa20.75■□□□□ 0.91
LINC00473-203ENST00000581850 CHD4Q14839 1912 aa20.74■□□□□ 0.91
LINC00473-203ENST00000581850 PPP1R42Q7Z4L9 355 aa20.74■□□□□ 0.91
LINC00473-203ENST00000581850 C2CD5Q86YS7 1000 aa20.74■□□□□ 0.91
LINC00473-203ENST00000581850 SYNE4Q8N205 404 aa20.74■□□□□ 0.91
LINC00473-203ENST00000581850 MRPL50Q8N5N7 158 aaKnown RBP20.74■□□□□ 0.91
LINC00473-203ENST00000581850 SSH1Q8WYL5 1049 aa20.74■□□□□ 0.91
LINC00473-203ENST00000581850 UTP14AQ9BVJ6 771 aaKnown RBP20.74■□□□□ 0.91
LINC00473-203ENST00000581850 KLRG2A4D1S0 409 aaPredicted RBP20.73■□□□□ 0.91
LINC00473-203ENST00000581850 PDE6BP35913 854 aa20.73■□□□□ 0.91
LINC00473-203ENST00000581850 TRIM28Q13263 835 aaKnown RBP20.73■□□□□ 0.91
LINC00473-203ENST00000581850 FKBP5Q13451 457 aaPredicted RBP20.73■□□□□ 0.91
LINC00473-203ENST00000581850 GPR162Q16538 588 aa20.73■□□□□ 0.91
LINC00473-203ENST00000581850 IGKV5-2P06315 115 aa20.72■□□□□ 0.91
LINC00473-203ENST00000581850 C3orf67Q6ZVT6 689 aa20.72■□□□□ 0.91
LINC00473-203ENST00000581850 BCL2L13Q9BXK5 485 aa20.72■□□□□ 0.91
LINC00473-203ENST00000581850 TAF1P21675 1872 aa20.72■□□□□ 0.91
LINC00473-203ENST00000581850 RNF123Q5XPI4 1314 aa20.72■□□□□ 0.91
LINC00473-203ENST00000581850 MYH3P11055 1940 aa20.71■□□□□ 0.91
LINC00473-203ENST00000581850 H0YIN7 160 aa20.71■□□□□ 0.91
LINC00473-203ENST00000581850 CT47B1P0C2W7 299 aaPredicted RBP20.71■□□□□ 0.91
LINC00473-203ENST00000581850 GTF2E1P29083 439 aaPredicted RBP20.71■□□□□ 0.91
LINC00473-203ENST00000581850 PIM2Q9P1W9 311 aa20.71■□□□□ 0.91
LINC00473-203ENST00000581850 SRGNP10124 158 aa20.7■□□□□ 0.9
LINC00473-203ENST00000581850 ALDH1L2Q3SY69 923 aa20.7■□□□□ 0.9
LINC00473-203ENST00000581850 TRMT112Q9UI30 125 aaKnown RBP20.7■□□□□ 0.9
LINC00473-203ENST00000581850 BCS1LQ9Y276 419 aa20.7■□□□□ 0.9
LINC00473-203ENST00000581850 F6X3S4 739 aa20.69■□□□□ 0.9
LINC00473-203ENST00000581850 CWF19L2Q2TBE0 894 aaKnown RBP20.69■□□□□ 0.9
LINC00473-203ENST00000581850 SLC10A5Q5PT55 438 aa20.69■□□□□ 0.9
LINC00473-203ENST00000581850 DNAAF4Q8WXU2 420 aa20.69■□□□□ 0.9
LINC00473-203ENST00000581850 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
LINC00473-203ENST00000581850 COL4A1P02462 1669 aa20.68■□□□□ 0.9
LINC00473-203ENST00000581850 CRY2Q49AN0 593 aa20.68■□□□□ 0.9
LINC00473-203ENST00000581850 CCDC191Q8NCU4 936 aa20.68■□□□□ 0.9
LINC00473-203ENST00000581850 FAM89AQ96GI7 184 aa20.68■□□□□ 0.9
LINC00473-203ENST00000581850 SH3TC1Q8TE82 1336 aa20.68■□□□□ 0.9
LINC00473-203ENST00000581850 FER1L6Q2WGJ9 1857 aa20.68■□□□□ 0.9
LINC00473-203ENST00000581850 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
LINC00473-203ENST00000581850 NEURL1BA8MQ27 555 aa20.67■□□□□ 0.9
LINC00473-203ENST00000581850 HCLS1P14317 486 aaPredicted RBP20.67■□□□□ 0.9
LINC00473-203ENST00000581850 RARSP54136 660 aaKnown RBP20.67■□□□□ 0.9
LINC00473-203ENST00000581850 DALRD3Q5D0E6 543 aaKnown RBP20.67■□□□□ 0.9
LINC00473-203ENST00000581850 ZNF622Q969S3 477 aaKnown RBP eCLIP20.67■□□□□ 0.9
LINC00473-203ENST00000581850 MASTLQ96GX5 879 aa20.67■□□□□ 0.9
LINC00473-203ENST00000581850 SMC4Q9NTJ3 1288 aa20.67■□□□□ 0.9
LINC00473-203ENST00000581850 CWC25Q9NXE8 425 aaPredicted RBP20.67■□□□□ 0.9
LINC00473-203ENST00000581850 SBF1O95248 1867 aa20.67■□□□□ 0.9
LINC00473-203ENST00000581850 RTL5Q5HYW3 569 aaPredicted RBP20.66■□□□□ 0.9
LINC00473-203ENST00000581850 STYK1Q6J9G0 422 aa20.66■□□□□ 0.9
LINC00473-203ENST00000581850 CCDC88AQ3V6T2 1871 aa20.65■□□□□ 0.9
LINC00473-203ENST00000581850 NEXNQ0ZGT2 675 aa20.65■□□□□ 0.9
LINC00473-203ENST00000581850 TTLL6Q8N841 843 aa20.65■□□□□ 0.9
LINC00473-203ENST00000581850 ZBTB38Q8NAP3 1195 aaPredicted RBP20.65■□□□□ 0.9
LINC00473-203ENST00000581850 JARID2Q92833 1246 aaPredicted RBP20.65■□□□□ 0.9
LINC00473-203ENST00000581850 PTPRCP08575 1304 aa20.64■□□□□ 0.89
LINC00473-203ENST00000581850 PCCAP05165 728 aaPredicted RBP20.64■□□□□ 0.89
LINC00473-203ENST00000581850 NPR1P16066 1061 aa20.64■□□□□ 0.89
LINC00473-203ENST00000581850 BEND3Q5T5X7 828 aa20.64■□□□□ 0.89
LINC00473-203ENST00000581850 GRIN3BO60391 1043 aa20.63■□□□□ 0.89
LINC00473-203ENST00000581850 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
LINC00473-203ENST00000581850 LINS1Q8NG48 757 aa20.63■□□□□ 0.89
LINC00473-203ENST00000581850 NLRP3Q96P20 1036 aa20.63■□□□□ 0.89
LINC00473-203ENST00000581850 LRRC37AA6NMS7 1700 aa20.62■□□□□ 0.89
LINC00473-203ENST00000581850 IRS4O14654 1257 aaPredicted RBP20.62■□□□□ 0.89
LINC00473-203ENST00000581850 GCKRQ14397 625 aa20.62■□□□□ 0.89
LINC00473-203ENST00000581850 PRPF40BQ6NWY9 871 aaKnown RBP20.62■□□□□ 0.89
LINC00473-203ENST00000581850 SPEF2Q9C093 1822 aa20.62■□□□□ 0.89
LINC00473-203ENST00000581850 CDHR2Q9BYE9 1310 aa20.61■□□□□ 0.89
LINC00473-203ENST00000581850 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
LINC00473-203ENST00000581850 SLC51AQ86UW1 340 aa20.61■□□□□ 0.89
LINC00473-203ENST00000581850 CNKSR1Q969H4 720 aa20.61■□□□□ 0.89
LINC00473-203ENST00000581850 BCAR3O75815 825 aa20.6■□□□□ 0.89
LINC00473-203ENST00000581850 CASP7P55210 303 aa20.6■□□□□ 0.89
LINC00473-203ENST00000581850 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
LINC00473-203ENST00000581850 NOB1Q9ULX3 412 aaKnown RBP20.6■□□□□ 0.89
LINC00473-203ENST00000581850 SNED1Q8TER0 1413 aa20.6■□□□□ 0.89
LINC00473-203ENST00000581850 ABCC4O15439 1325 aa20.59■□□□□ 0.89
LINC00473-203ENST00000581850 H7C1W4 665 aa20.59■□□□□ 0.89
LINC00473-203ENST00000581850 C21orf2O43822 256 aa20.59■□□□□ 0.89
LINC00473-203ENST00000581850 C7orf43Q8WVR3 580 aa20.59■□□□□ 0.89
LINC00473-203ENST00000581850 RPGRQ92834 1020 aaKnown RBP20.59■□□□□ 0.89
LINC00473-203ENST00000581850 ZNF219Q9P2Y4 722 aaPredicted RBP20.59■□□□□ 0.89
LINC00473-203ENST00000581850 SF3B3Q15393 1217 aaKnown RBP20.58■□□□□ 0.89
LINC00473-203ENST00000581850 OLFM4Q6UX06 510 aa20.58■□□□□ 0.89
LINC00473-203ENST00000581850 CRAMP1Q96RY5 1269 aa20.58■□□□□ 0.89
LINC00473-203ENST00000581850 DICER1Q9UPY3 1922 aaKnown RBP20.58■□□□□ 0.88
LINC00473-203ENST00000581850 ALDH1B1P30837 517 aa20.57■□□□□ 0.88
LINC00473-203ENST00000581850 ARHGAP27Q6ZUM4 889 aa20.57■□□□□ 0.88
LINC00473-203ENST00000581850 UBE3BQ7Z3V4 1068 aa20.57■□□□□ 0.88
LINC00473-203ENST00000581850 TIAM2Q8IVF5 1701 aa20.57■□□□□ 0.88
LINC00473-203ENST00000581850 RBM17Q96I25 401 aaKnown RBP20.57■□□□□ 0.88
LINC00473-203ENST00000581850 PDE8AO60658 829 aa20.56■□□□□ 0.88
LINC00473-203ENST00000581850 SRCIN1Q9C0H9 1055 aa20.56■□□□□ 0.88
LINC00473-203ENST00000581850 KIF16BQ96L93 1317 aa20.55■□□□□ 0.88
LINC00473-203ENST00000581850 NFKBIEO00221 500 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms