RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 DPYDQ12882 1025 aa8.76□□□□□ -1.01
SMCHD1-205ENST00000581383 PRRT3Q5FWE3 981 aa8.76□□□□□ -1.01
SMCHD1-205ENST00000581383 SLC30A3Q99726 388 aa8.76□□□□□ -1.01
SMCHD1-205ENST00000581383 KRTAP4-12Q9BQ66 201 aa8.76□□□□□ -1.01
SMCHD1-205ENST00000581383 SIN3BO75182 1162 aa8.75□□□□□ -1.01
SMCHD1-205ENST00000581383 ZNF280CQ8ND82 737 aa8.75□□□□□ -1.01
SMCHD1-205ENST00000581383 UBE2OQ9C0C9 1292 aaKnown RBP8.75□□□□□ -1.01
SMCHD1-205ENST00000581383 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
SMCHD1-205ENST00000581383 PPP1R15AO75807 674 aaPredicted RBP8.74□□□□□ -1.01
SMCHD1-205ENST00000581383 BAG6P46379 1132 aa8.74□□□□□ -1.01
SMCHD1-205ENST00000581383 HIRAP54198 1017 aaPredicted RBP8.74□□□□□ -1.01
SMCHD1-205ENST00000581383 PBXIP1Q96AQ6 731 aa8.74□□□□□ -1.01
SMCHD1-205ENST00000581383 HCN2Q9UL51 889 aa8.74□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L15C9J2P7 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L10C9JJH3 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L13C9JLJ4 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L12C9JPN9 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L11C9JVI0 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L21D6R901 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L18D6R9N7 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L22D6RA61 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L17D6RBQ6 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L19D6RCP7 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L20D6RJB6 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 M0R082 166 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 APBA3O96018 575 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 ADH7P40394 386 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 USP17L24Q0WX57 530 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 CRTC2Q53ET0 693 aaPredicted RBP8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 CDCA8Q53HL2 280 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 ANKMY2Q8IV38 441 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 ZNF417Q8TAU3 575 aa8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 ZNF587Q96SQ5 575 aaPredicted RBP8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 C2orf49Q9BVC5 232 aaPredicted RBP8.73□□□□□ -1.01
SMCHD1-205ENST00000581383 C1QTNF9BB2RNN3 333 aa8.72□□□□□ -1.01
SMCHD1-205ENST00000581383 EPB42P16452 691 aa8.72□□□□□ -1.01
SMCHD1-205ENST00000581383 BTLAQ7Z6A9 289 aa8.72□□□□□ -1.01
SMCHD1-205ENST00000581383 C21orf2O43822 256 aa8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 FURINP09958 794 aa8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 SPATA31C1P0DKV0 1188 aa8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 HOXB4P17483 251 aaPredicted RBP8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 SRPK2P78362 688 aaKnown RBP8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 TYRO3Q06418 890 aa8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 TRIM28Q13263 835 aaKnown RBP8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 PTK7Q13308 1070 aa8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 STAG2Q8N3U4 1231 aa8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.71□□□□□ -1.02
SMCHD1-205ENST00000581383 FAM196BA6NMK8 535 aa8.7□□□□□ -1.02
SMCHD1-205ENST00000581383 BTBD11A6QL63 1104 aa8.7□□□□□ -1.02
SMCHD1-205ENST00000581383 PDIA4P13667 645 aaKnown RBP8.7□□□□□ -1.02
SMCHD1-205ENST00000581383 RTN1Q16799 776 aa8.7□□□□□ -1.02
SMCHD1-205ENST00000581383 TRAPPC3LQ5T215 181 aa8.7□□□□□ -1.02
SMCHD1-205ENST00000581383 RETREG2Q8NC44 543 aa8.7□□□□□ -1.02
SMCHD1-205ENST00000581383 FAM200AQ8TCP9 573 aa8.7□□□□□ -1.02
SMCHD1-205ENST00000581383 KRTAP9-9Q9BYP9 154 aa8.7□□□□□ -1.02
SMCHD1-205ENST00000581383 KRTAP9-4Q9BYQ2 154 aa8.7□□□□□ -1.02
SMCHD1-205ENST00000581383 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
SMCHD1-205ENST00000581383 CD163Q86VB7 1156 aa8.69□□□□□ -1.02
SMCHD1-205ENST00000581383 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
SMCHD1-205ENST00000581383 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
SMCHD1-205ENST00000581383 TRIM11Q96F44 468 aa8.69□□□□□ -1.02
SMCHD1-205ENST00000581383 LILRB5O75023 590 aa8.68□□□□□ -1.02
SMCHD1-205ENST00000581383 IGFBP4P22692 258 aa8.68□□□□□ -1.02
SMCHD1-205ENST00000581383 GATA4P43694 442 aa8.68□□□□□ -1.02
SMCHD1-205ENST00000581383 KANK4Q5T7N3 995 aaPredicted RBP8.68□□□□□ -1.02
SMCHD1-205ENST00000581383 DKK1O94907 266 aa8.67□□□□□ -1.02
SMCHD1-205ENST00000581383 CHRNA4P43681 627 aa8.67□□□□□ -1.02
SMCHD1-205ENST00000581383 KCNQ4P56696 695 aa8.67□□□□□ -1.02
SMCHD1-205ENST00000581383 JPH1Q9HDC5 661 aaPredicted RBP8.67□□□□□ -1.02
SMCHD1-205ENST00000581383 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.67□□□□□ -1.02
SMCHD1-205ENST00000581383 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 TGFBR3LH3BV60 316 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 ALBP02768 609 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 DGKZQ13574 1117 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 CCINQ13939 588 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 C8orf86Q6ZUL3 223 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 KRT25Q7Z3Z0 450 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 MICALL1Q8N3F8 863 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 NUDT8Q8WV74 236 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 NACC1Q96RE7 527 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 KLK14Q9P0G3 267 aa8.66□□□□□ -1.02
SMCHD1-205ENST00000581383 NFKB1P19838 968 aa8.65□□□□□ -1.02
SMCHD1-205ENST00000581383 DOC2BQ14184 412 aa8.65□□□□□ -1.02
SMCHD1-205ENST00000581383 EFCC1Q9HA90 598 aa8.65□□□□□ -1.02
SMCHD1-205ENST00000581383 IDH3AP50213 366 aa8.64□□□□□ -1.03
SMCHD1-205ENST00000581383 PCSK7Q16549 785 aa8.64□□□□□ -1.03
SMCHD1-205ENST00000581383 IER5Q5VY09 327 aa8.64□□□□□ -1.03
SMCHD1-205ENST00000581383 POTEAQ6S8J7 498 aa8.64□□□□□ -1.03
SMCHD1-205ENST00000581383 FOXO3O43524 673 aa8.63□□□□□ -1.03
SMCHD1-205ENST00000581383 RGS9O75916 674 aaPredicted RBP8.63□□□□□ -1.03
SMCHD1-205ENST00000581383 ARID4AP29374 1257 aaPredicted RBP8.63□□□□□ -1.03
SMCHD1-205ENST00000581383 RAC1P63000 192 aa8.63□□□□□ -1.03
SMCHD1-205ENST00000581383 DNAJB12Q9NXW2 375 aaKnown RBP8.63□□□□□ -1.03
SMCHD1-205ENST00000581383 SLC6A14Q9UN76 642 aa8.63□□□□□ -1.03
SMCHD1-205ENST00000581383 NOVA2Q9UNW9 492 aaKnown RBP8.63□□□□□ -1.03
SMCHD1-205ENST00000581383 KRTAP4-8A0A0G2JLE6 195 aa8.62□□□□□ -1.03
SMCHD1-205ENST00000581383 ATG7O95352 703 aa8.62□□□□□ -1.03
SMCHD1-205ENST00000581383 ARSDP51689 593 aa8.62□□□□□ -1.03
SMCHD1-205ENST00000581383 PSAPL1Q6NUJ1 521 aa8.62□□□□□ -1.03
SMCHD1-205ENST00000581383 STARD13Q9Y3M8 1113 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms