RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
CCDC47-203ENST00000580986 GALR2O43603 387 aaPredicted RBP13.21□□□□□ -0.29
CCDC47-203ENST00000580986 TCIRG1Q13488 830 aa13.21□□□□□ -0.29
CCDC47-203ENST00000580986 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
CCDC47-203ENST00000580986 USPL1Q5W0Q7 1092 aa13.21□□□□□ -0.29
CCDC47-203ENST00000580986 MAP3K2Q9Y2U5 619 aa13.21□□□□□ -0.29
CCDC47-203ENST00000580986 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
CCDC47-203ENST00000580986 R3HDM1Q15032 1099 aaKnown RBP13.2□□□□□ -0.3
CCDC47-203ENST00000580986 PARP10Q53GL7 1025 aa13.2□□□□□ -0.3
CCDC47-203ENST00000580986 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
CCDC47-203ENST00000580986 LINS1Q8NG48 757 aa13.2□□□□□ -0.3
CCDC47-203ENST00000580986 ISCA1Q9BUE6 129 aa13.2□□□□□ -0.3
CCDC47-203ENST00000580986 ZBTB3Q9H5J0 574 aa13.2□□□□□ -0.3
CCDC47-203ENST00000580986 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
CCDC47-203ENST00000580986 AFDNP55196 1824 aaKnown RBP13.19□□□□□ -0.3
CCDC47-203ENST00000580986 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
CCDC47-203ENST00000580986 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
CCDC47-203ENST00000580986 RRP1P56182 461 aaKnown RBP13.19□□□□□ -0.3
CCDC47-203ENST00000580986 HLFQ16534 295 aa13.19□□□□□ -0.3
CCDC47-203ENST00000580986 INTS3Q68E01 1043 aaKnown RBP13.19□□□□□ -0.3
CCDC47-203ENST00000580986 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
CCDC47-203ENST00000580986 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
CCDC47-203ENST00000580986 SRP68Q9UHB9 627 aaKnown RBP13.19□□□□□ -0.3
CCDC47-203ENST00000580986 TM4SF1P30408 202 aa13.18□□□□□ -0.3
CCDC47-203ENST00000580986 FKBP8Q14318 412 aa13.18□□□□□ -0.3
CCDC47-203ENST00000580986 BEND3Q5T5X7 828 aa13.18□□□□□ -0.3
CCDC47-203ENST00000580986 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
CCDC47-203ENST00000580986 FRAT1Q92837 279 aaPredicted RBP13.18□□□□□ -0.3
CCDC47-203ENST00000580986 ARXQ96QS3 562 aa13.18□□□□□ -0.3
CCDC47-203ENST00000580986 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
CCDC47-203ENST00000580986 F6X3S4 739 aa13.17□□□□□ -0.3
CCDC47-203ENST00000580986 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
CCDC47-203ENST00000580986 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
CCDC47-203ENST00000580986 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
CCDC47-203ENST00000580986 LAMB2P55268 1798 aa13.17□□□□□ -0.3
CCDC47-203ENST00000580986 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
CCDC47-203ENST00000580986 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
CCDC47-203ENST00000580986 NFIXQ14938 502 aa13.16□□□□□ -0.3
CCDC47-203ENST00000580986 TBC1D9BQ66K14 1250 aa13.16□□□□□ -0.3
CCDC47-203ENST00000580986 NLRP10Q86W26 655 aa13.16□□□□□ -0.3
CCDC47-203ENST00000580986 FTSJ3Q8IY81 847 aaKnown RBP13.16□□□□□ -0.3
CCDC47-203ENST00000580986 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
CCDC47-203ENST00000580986 MYD88Q99836 296 aa13.16□□□□□ -0.3
CCDC47-203ENST00000580986 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
CCDC47-203ENST00000580986 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
CCDC47-203ENST00000580986 NIP7Q9Y221 180 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC47-203ENST00000580986 UTYO14607 1347 aa13.15□□□□□ -0.3
CCDC47-203ENST00000580986 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
CCDC47-203ENST00000580986 PDGFDQ9GZP0 370 aaPredicted RBP13.15□□□□□ -0.3
CCDC47-203ENST00000580986 CWC25Q9NXE8 425 aaPredicted RBP13.15□□□□□ -0.3
CCDC47-203ENST00000580986 KIF13BQ9NQT8 1826 aa13.14□□□□□ -0.31
CCDC47-203ENST00000580986 POLRMTO00411 1230 aaKnown RBP13.14□□□□□ -0.31
CCDC47-203ENST00000580986 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
CCDC47-203ENST00000580986 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
CCDC47-203ENST00000580986 GCKRQ14397 625 aa13.14□□□□□ -0.31
CCDC47-203ENST00000580986 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
CCDC47-203ENST00000580986 ZBTB38Q8NAP3 1195 aaPredicted RBP13.14□□□□□ -0.31
CCDC47-203ENST00000580986 SGIP1Q9BQI5 828 aa13.14□□□□□ -0.31
CCDC47-203ENST00000580986 CHMP4BQ9H444 224 aaKnown RBP13.14□□□□□ -0.31
CCDC47-203ENST00000580986 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
CCDC47-203ENST00000580986 PSDA5PKW4 1024 aaPredicted RBP13.13□□□□□ -0.31
CCDC47-203ENST00000580986 NTSR2O95665 410 aa13.13□□□□□ -0.31
CCDC47-203ENST00000580986 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
CCDC47-203ENST00000580986 MMP10P09238 476 aa13.13□□□□□ -0.31
CCDC47-203ENST00000580986 RLBP1P12271 317 aa13.13□□□□□ -0.31
CCDC47-203ENST00000580986 CWF19L2Q2TBE0 894 aaKnown RBP13.13□□□□□ -0.31
CCDC47-203ENST00000580986 TPTE2Q6XPS3 522 aa13.13□□□□□ -0.31
CCDC47-203ENST00000580986 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
CCDC47-203ENST00000580986 LRP5O75197 1615 aa13.13□□□□□ -0.31
CCDC47-203ENST00000580986 ATP5J2-PTCD1G3V325 749 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 H7C1W4 665 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 GRM8O00222 908 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 GPTP24298 496 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 POLD1P28340 1107 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 DDR1Q08345 913 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 AAMPQ13685 434 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 MVPQ14764 893 aaKnown RBP13.12□□□□□ -0.31
CCDC47-203ENST00000580986 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 CLUAP1Q96AJ1 413 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
CCDC47-203ENST00000580986 DDX19BQ9UMR2 479 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
CCDC47-203ENST00000580986 PARP3Q9Y6F1 533 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 DDX60Q8IY21 1712 aaKnown RBP13.12□□□□□ -0.31
CCDC47-203ENST00000580986 C10orf71Q711Q0 1435 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
CCDC47-203ENST00000580986 PLIN1O60240 522 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 SERPINB2P05120 415 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 GNAI3P08754 354 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 CASP7P55210 303 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 SLC10A5Q5PT55 438 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
CCDC47-203ENST00000580986 CNBD1Q8NA66 436 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 USP44Q9H0E7 712 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 TNNQ9UQP3 1299 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 MYH3P11055 1940 aa13.11□□□□□ -0.31
CCDC47-203ENST00000580986 ZBTB7AO95365 584 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms