RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 SLC10A5Q5PT55 438 aa23.95■■□□□ 1.42
NEK4P2-201ENST00000580004 CCDC24Q8N4L8 307 aa23.95■■□□□ 1.42
NEK4P2-201ENST00000580004 CNKSR1Q969H4 720 aa23.95■■□□□ 1.42
NEK4P2-201ENST00000580004 ZNF428Q96B54 188 aa23.95■■□□□ 1.42
NEK4P2-201ENST00000580004 NPR1P16066 1061 aa23.94■■□□□ 1.42
NEK4P2-201ENST00000580004 CRY2Q49AN0 593 aa23.94■■□□□ 1.42
NEK4P2-201ENST00000580004 KSR2Q6VAB6 950 aa23.94■■□□□ 1.42
NEK4P2-201ENST00000580004 TRMT2AQ8IZ69 625 aaKnown RBP23.94■■□□□ 1.42
NEK4P2-201ENST00000580004 TNRC6CQ9HCJ0 1690 aaKnown RBP23.94■■□□□ 1.42
NEK4P2-201ENST00000580004 ABCC12Q96J65 1359 aa23.93■■□□□ 1.42
NEK4P2-201ENST00000580004 YY1P25490 414 aa23.93■■□□□ 1.42
NEK4P2-201ENST00000580004 ERFEQ4G0M1 354 aa23.93■■□□□ 1.42
NEK4P2-201ENST00000580004 NUTM1Q86Y26 1132 aa23.93■■□□□ 1.42
NEK4P2-201ENST00000580004 SH3TC1Q8TE82 1336 aa23.92■■□□□ 1.42
NEK4P2-201ENST00000580004 ZNF622Q969S3 477 aaKnown RBP eCLIP23.92■■□□□ 1.42
NEK4P2-201ENST00000580004 METTL22Q9BUU2 404 aaPredicted RBP23.92■■□□□ 1.42
NEK4P2-201ENST00000580004 TRMT112Q9UI30 125 aaKnown RBP23.92■■□□□ 1.42
NEK4P2-201ENST00000580004 WWC3Q9ULE0 1092 aa23.92■■□□□ 1.42
NEK4P2-201ENST00000580004 CT47B1P0C2W7 299 aaPredicted RBP23.91■■□□□ 1.42
NEK4P2-201ENST00000580004 ALDH1B1P30837 517 aa23.91■■□□□ 1.42
NEK4P2-201ENST00000580004 FLIIQ13045 1269 aa23.91■■□□□ 1.42
NEK4P2-201ENST00000580004 CACNA1SQ13698 1873 aa23.91■■□□□ 1.42
NEK4P2-201ENST00000580004 LAMB2P55268 1798 aa23.91■■□□□ 1.42
NEK4P2-201ENST00000580004 CCDC191Q8NCU4 936 aa23.9■■□□□ 1.42
NEK4P2-201ENST00000580004 NLRP3Q96P20 1036 aa23.9■■□□□ 1.42
NEK4P2-201ENST00000580004 SLX4Q8IY92 1834 aa23.89■■□□□ 1.42
NEK4P2-201ENST00000580004 PI4KAP2A4QPH2 592 aa23.89■■□□□ 1.41
NEK4P2-201ENST00000580004 HSP90B1P14625 803 aaKnown RBP23.89■■□□□ 1.41
NEK4P2-201ENST00000580004 SOGA3Q5TF21 947 aa23.89■■□□□ 1.41
NEK4P2-201ENST00000580004 PI4KAP1Q8N8J0 262 aa23.89■■□□□ 1.41
NEK4P2-201ENST00000580004 MAP3K2Q9Y2U5 619 aa23.89■■□□□ 1.41
NEK4P2-201ENST00000580004 ADCY9O60503 1353 aa23.89■■□□□ 1.41
NEK4P2-201ENST00000580004 DDX60Q8IY21 1712 aaKnown RBP23.88■■□□□ 1.41
NEK4P2-201ENST00000580004 HOXA10P31260 410 aaPredicted RBP23.88■■□□□ 1.41
NEK4P2-201ENST00000580004 NEXNQ0ZGT2 675 aa23.88■■□□□ 1.41
NEK4P2-201ENST00000580004 ATP5J2-PTCD1G3V325 749 aa23.87■■□□□ 1.41
NEK4P2-201ENST00000580004 TCERG1O14776 1098 aaKnown RBP23.87■■□□□ 1.41
NEK4P2-201ENST00000580004 ARHGAP27Q6ZUM4 889 aa23.87■■□□□ 1.41
NEK4P2-201ENST00000580004 G2E3Q7L622 706 aa23.87■■□□□ 1.41
NEK4P2-201ENST00000580004 CDCA7LQ96GN5 454 aa23.87■■□□□ 1.41
NEK4P2-201ENST00000580004 MYD88Q99836 296 aa23.87■■□□□ 1.41
NEK4P2-201ENST00000580004 FER1L6Q2WGJ9 1857 aa23.87■■□□□ 1.41
NEK4P2-201ENST00000580004 SBF1O95248 1867 aa23.86■■□□□ 1.41
NEK4P2-201ENST00000580004 FKBP5Q13451 457 aaPredicted RBP23.86■■□□□ 1.41
NEK4P2-201ENST00000580004 PRPF40BQ6NWY9 871 aaKnown RBP23.86■■□□□ 1.41
NEK4P2-201ENST00000580004 RPGRQ92834 1020 aaKnown RBP23.86■■□□□ 1.41
NEK4P2-201ENST00000580004 ZBTB38Q8NAP3 1195 aaPredicted RBP23.85■■□□□ 1.41
NEK4P2-201ENST00000580004 CRAMP1Q96RY5 1269 aa23.85■■□□□ 1.41
NEK4P2-201ENST00000580004 CWC25Q9NXE8 425 aaPredicted RBP23.85■■□□□ 1.41
NEK4P2-201ENST00000580004 HNRNPUQ00839 825 aaKnown RBP eCLIP23.84■■□□□ 1.41
NEK4P2-201ENST00000580004 ALDH1L2Q3SY69 923 aa23.84■■□□□ 1.41
NEK4P2-201ENST00000580004 RBM17Q96I25 401 aaKnown RBP23.84■■□□□ 1.41
NEK4P2-201ENST00000580004 PCCAP05165 728 aaPredicted RBP23.83■■□□□ 1.41
NEK4P2-201ENST00000580004 DNAAF4Q8WXU2 420 aa23.83■■□□□ 1.41
NEK4P2-201ENST00000580004 GRIPAP1Q4V328 841 aa23.82■■□□□ 1.4
NEK4P2-201ENST00000580004 C7orf43Q8WVR3 580 aa23.82■■□□□ 1.4
NEK4P2-201ENST00000580004 LTBP3Q9NS15 1303 aa23.82■■□□□ 1.4
NEK4P2-201ENST00000580004 IGKV5-2P06315 115 aa23.81■■□□□ 1.4
NEK4P2-201ENST00000580004 CC2D2BQ6DHV5 1058 aa23.81■■□□□ 1.4
NEK4P2-201ENST00000580004 LINS1Q8NG48 757 aa23.81■■□□□ 1.4
NEK4P2-201ENST00000580004 FAM89AQ96GI7 184 aa23.81■■□□□ 1.4
NEK4P2-201ENST00000580004 C21orf2O43822 256 aa23.8■■□□□ 1.4
NEK4P2-201ENST00000580004 SF3B3Q15393 1217 aaKnown RBP23.8■■□□□ 1.4
NEK4P2-201ENST00000580004 PTPRCP08575 1304 aa23.8■■□□□ 1.4
NEK4P2-201ENST00000580004 ZBED9Q6R2W3 1325 aa23.8■■□□□ 1.4
NEK4P2-201ENST00000580004 CDHR2Q9BYE9 1310 aa23.8■■□□□ 1.4
NEK4P2-201ENST00000580004 MYH3P11055 1940 aa23.79■■□□□ 1.4
NEK4P2-201ENST00000580004 NEURL1BA8MQ27 555 aa23.79■■□□□ 1.4
NEK4P2-201ENST00000580004 IRS4O14654 1257 aaPredicted RBP23.79■■□□□ 1.4
NEK4P2-201ENST00000580004 HCLS1P14317 486 aaPredicted RBP23.79■■□□□ 1.4
NEK4P2-201ENST00000580004 CCDC93Q567U6 631 aa23.79■■□□□ 1.4
NEK4P2-201ENST00000580004 ZC3H4Q9UPT8 1303 aaKnown RBP23.79■■□□□ 1.4
NEK4P2-201ENST00000580004 CCDC88AQ3V6T2 1871 aa23.79■■□□□ 1.4
NEK4P2-201ENST00000580004 DICER1Q9UPY3 1922 aaKnown RBP23.78■■□□□ 1.4
NEK4P2-201ENST00000580004 C3orf67Q6ZVT6 689 aa23.78■■□□□ 1.4
NEK4P2-201ENST00000580004 RTKN2Q8IZC4 609 aa23.78■■□□□ 1.4
NEK4P2-201ENST00000580004 SYNE4Q8N205 404 aa23.78■■□□□ 1.4
NEK4P2-201ENST00000580004 MRPL50Q8N5N7 158 aaKnown RBP23.78■■□□□ 1.4
NEK4P2-201ENST00000580004 LMNB1P20700 586 aa23.77■■□□□ 1.4
NEK4P2-201ENST00000580004 TMC4Q7Z404 712 aa23.77■■□□□ 1.4
NEK4P2-201ENST00000580004 NFKBIEO00221 500 aa23.76■■□□□ 1.39
NEK4P2-201ENST00000580004 BBOX1O75936 387 aa23.76■■□□□ 1.39
NEK4P2-201ENST00000580004 BRPF1P55201 1214 aaPredicted RBP23.76■■□□□ 1.39
NEK4P2-201ENST00000580004 GCKRQ14397 625 aa23.76■■□□□ 1.39
NEK4P2-201ENST00000580004 DDX46Q7L014 1031 aaKnown RBP23.76■■□□□ 1.39
NEK4P2-201ENST00000580004 SSH1Q8WYL5 1049 aa23.76■■□□□ 1.39
NEK4P2-201ENST00000580004 PDE8AO60658 829 aa23.75■■□□□ 1.39
NEK4P2-201ENST00000580004 CWF19L2Q2TBE0 894 aaKnown RBP23.75■■□□□ 1.39
NEK4P2-201ENST00000580004 TAOK3Q9H2K8 898 aa23.75■■□□□ 1.39
NEK4P2-201ENST00000580004 ABCC4O15439 1325 aa23.75■■□□□ 1.39
NEK4P2-201ENST00000580004 PPEF1O14829 653 aaPredicted RBP23.74■■□□□ 1.39
NEK4P2-201ENST00000580004 BEND3Q5T5X7 828 aa23.74■■□□□ 1.39
NEK4P2-201ENST00000580004 C9orf131Q5VYM1 1079 aa23.74■■□□□ 1.39
NEK4P2-201ENST00000580004 ZNF784Q8NCA9 323 aaPredicted RBP23.74■■□□□ 1.39
NEK4P2-201ENST00000580004 TMX4Q9H1E5 349 aaPredicted RBP23.74■■□□□ 1.39
NEK4P2-201ENST00000580004 SNED1Q8TER0 1413 aa23.74■■□□□ 1.39
NEK4P2-201ENST00000580004 H7C1W4 665 aa23.73■■□□□ 1.39
NEK4P2-201ENST00000580004 GRAPQ13588 217 aa23.73■■□□□ 1.39
NEK4P2-201ENST00000580004 GRAPLQ8TC17 118 aaPredicted RBP23.73■■□□□ 1.39
NEK4P2-201ENST00000580004 ZNF219Q9P2Y4 722 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms