RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 OLFM4Q6UX06 510 aa29.77■■■□□ 2.36
CDKN2A-212ENST00000578845 XAGE3Q8WTP9 111 aa29.77■■■□□ 2.36
CDKN2A-212ENST00000578845 LAS1LQ9Y4W2 734 aaKnown RBP29.77■■■□□ 2.36
CDKN2A-212ENST00000578845 HSP90AB3PQ58FF7 597 aa29.76■■■□□ 2.35
CDKN2A-212ENST00000578845 NECTIN2Q92692 538 aa29.76■■■□□ 2.35
CDKN2A-212ENST00000578845 ANKRD36CQ5JPF3 1778 aa29.76■■■□□ 2.35
CDKN2A-212ENST00000578845 ZNF853P0CG23 659 aa29.75■■■□□ 2.35
CDKN2A-212ENST00000578845 SLC10A5Q5PT55 438 aa29.75■■■□□ 2.35
CDKN2A-212ENST00000578845 DNAJC5GQ8N7S2 189 aa29.75■■■□□ 2.35
CDKN2A-212ENST00000578845 RPGRQ92834 1020 aaKnown RBP29.75■■■□□ 2.35
CDKN2A-212ENST00000578845 CC2D2BQ6DHV5 1058 aa29.74■■■□□ 2.35
CDKN2A-212ENST00000578845 CRAMP1Q96RY5 1269 aa29.74■■■□□ 2.35
CDKN2A-212ENST00000578845 PSMD1Q99460 953 aa29.74■■■□□ 2.35
CDKN2A-212ENST00000578845 UTP14AQ9BVJ6 771 aaKnown RBP29.74■■■□□ 2.35
CDKN2A-212ENST00000578845 APAF1O14727 1248 aa29.73■■■□□ 2.35
CDKN2A-212ENST00000578845 HDGFL1Q5TGJ6 251 aa29.73■■■□□ 2.35
CDKN2A-212ENST00000578845 ZNF277Q9NRM2 450 aaPredicted RBP29.73■■■□□ 2.35
CDKN2A-212ENST00000578845 CHPF2Q9P2E5 772 aa29.73■■■□□ 2.35
CDKN2A-212ENST00000578845 ZEB1P37275 1124 aaPredicted RBP29.72■■■□□ 2.35
CDKN2A-212ENST00000578845 AIMP1Q12904 312 aaKnown RBP29.72■■■□□ 2.35
CDKN2A-212ENST00000578845 C3orf67Q6ZVT6 689 aa29.72■■■□□ 2.35
CDKN2A-212ENST00000578845 RBM17Q96I25 401 aaKnown RBP29.72■■■□□ 2.35
CDKN2A-212ENST00000578845 MBIPQ9NS73 344 aa29.72■■■□□ 2.35
CDKN2A-212ENST00000578845 DDNO94850 711 aaPredicted RBP29.71■■■□□ 2.35
CDKN2A-212ENST00000578845 TCIRG1Q13488 830 aa29.71■■■□□ 2.35
CDKN2A-212ENST00000578845 GRIPAP1Q4V328 841 aa29.71■■■□□ 2.35
CDKN2A-212ENST00000578845 NLRP10Q86W26 655 aa29.71■■■□□ 2.35
CDKN2A-212ENST00000578845 IFT57Q9NWB7 429 aa29.71■■■□□ 2.35
CDKN2A-212ENST00000578845 L3MBTL3Q96JM7 780 aaPredicted RBP29.7■■■□□ 2.35
CDKN2A-212ENST00000578845 NLRP3Q96P20 1036 aa29.7■■■□□ 2.35
CDKN2A-212ENST00000578845 DBF4Q9UBU7 674 aaPredicted RBP29.7■■■□□ 2.35
CDKN2A-212ENST00000578845 IARSP41252 1262 aaKnown RBP29.69■■■□□ 2.34
CDKN2A-212ENST00000578845 CALD1Q05682 793 aaKnown RBP29.69■■■□□ 2.34
CDKN2A-212ENST00000578845 SYNE4Q8N205 404 aa29.69■■■□□ 2.34
CDKN2A-212ENST00000578845 DUSP27Q5VZP5 1158 aa29.68■■■□□ 2.34
CDKN2A-212ENST00000578845 GNAI1P63096 354 aa29.67■■■□□ 2.34
CDKN2A-212ENST00000578845 PLBD2Q8NHP8 589 aa29.67■■■□□ 2.34
CDKN2A-212ENST00000578845 FZD9O00144 591 aa29.66■■■□□ 2.34
CDKN2A-212ENST00000578845 PPEF1O14829 653 aaPredicted RBP29.66■■■□□ 2.34
CDKN2A-212ENST00000578845 IQCA1LA6NCM1 817 aa29.65■■■□□ 2.34
CDKN2A-212ENST00000578845 HYPKQ9NX55 129 aa29.65■■■□□ 2.34
CDKN2A-212ENST00000578845 ZNF541Q9H0D2 1346 aa29.65■■■□□ 2.34
CDKN2A-212ENST00000578845 SCN4AP35499 1836 aa29.64■■■□□ 2.34
CDKN2A-212ENST00000578845 ANKRD13DQ6ZTN6 518 aa29.64■■■□□ 2.34
CDKN2A-212ENST00000578845 HTRA3P83110 453 aa29.63■■■□□ 2.33
CDKN2A-212ENST00000578845 TRMT112Q9UI30 125 aaKnown RBP29.63■■■□□ 2.33
CDKN2A-212ENST00000578845 SH3TC1Q8TE82 1336 aa29.63■■■□□ 2.33
CDKN2A-212ENST00000578845 LAMB2P55268 1798 aa29.62■■■□□ 2.33
CDKN2A-212ENST00000578845 CCDC184Q52MB2 194 aa29.62■■■□□ 2.33
CDKN2A-212ENST00000578845 KLRG1Q96E93 195 aa29.62■■■□□ 2.33
CDKN2A-212ENST00000578845 ISCA1Q9BUE6 129 aa29.62■■■□□ 2.33
CDKN2A-212ENST00000578845 ABCC4O15439 1325 aa29.62■■■□□ 2.33
CDKN2A-212ENST00000578845 PCNTO95613 3336 aa29.62■■■□□ 2.33
CDKN2A-212ENST00000578845 COL4A5P29400 1685 aa29.62■■■□□ 2.33
CDKN2A-212ENST00000578845 ATP6V0A2Q9Y487 856 aa29.61■■■□□ 2.33
CDKN2A-212ENST00000578845 HCLS1P14317 486 aaPredicted RBP29.6■■■□□ 2.33
CDKN2A-212ENST00000578845 SLC51AQ86UW1 340 aa29.6■■■□□ 2.33
CDKN2A-212ENST00000578845 CHADLQ6NUI6 762 aa29.59■■■□□ 2.33
CDKN2A-212ENST00000578845 JDP2Q8WYK2 163 aa29.59■■■□□ 2.33
CDKN2A-212ENST00000578845 TAF1DQ9H5J8 278 aaPredicted RBP29.59■■■□□ 2.33
CDKN2A-212ENST00000578845 POTEIP0CG38 1075 aa29.58■■■□□ 2.33
CDKN2A-212ENST00000578845 POTEJP0CG39 1038 aa29.58■■■□□ 2.33
CDKN2A-212ENST00000578845 TRIM28Q13263 835 aaKnown RBP29.58■■■□□ 2.33
CDKN2A-212ENST00000578845 GPC2Q8N158 579 aa29.58■■■□□ 2.33
CDKN2A-212ENST00000578845 JMYQ8N9B5 988 aa29.58■■■□□ 2.33
CDKN2A-212ENST00000578845 BBOX1O75936 387 aa29.57■■■□□ 2.32
CDKN2A-212ENST00000578845 CCDC27Q2M243 656 aa29.57■■■□□ 2.32
CDKN2A-212ENST00000578845 LDHDQ86WU2 507 aa29.56■■■□□ 2.32
CDKN2A-212ENST00000578845 VPS33BQ9H267 617 aa29.56■■■□□ 2.32
CDKN2A-212ENST00000578845 DDX60Q8IY21 1712 aaKnown RBP29.56■■■□□ 2.32
CDKN2A-212ENST00000578845 RTFDC1Q9BY42 306 aaPredicted RBP29.55■■■□□ 2.32
CDKN2A-212ENST00000578845 TMX4Q9H1E5 349 aaPredicted RBP29.55■■■□□ 2.32
CDKN2A-212ENST00000578845 HACL1Q9UJ83 578 aa29.55■■■□□ 2.32
CDKN2A-212ENST00000578845 TCERG1O14776 1098 aaKnown RBP29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 GRAPQ13588 217 aa29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 NCBP3Q53F19 620 aaKnown RBP29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 DDX46Q7L014 1031 aaKnown RBP29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 SP8Q8IXZ3 490 aa29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 LARGE2Q8N3Y3 721 aa29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 C8orf58Q8NAV2 365 aa29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 GRAPLQ8TC17 118 aaPredicted RBP29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 CHMP4AQ9BY43 222 aa29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 ADAMTSL1Q8N6G6 1762 aa29.54■■■□□ 2.32
CDKN2A-212ENST00000578845 ATP5J2-PTCD1G3V325 749 aa29.53■■■□□ 2.32
CDKN2A-212ENST00000578845 ZNF316A6NFI3 1004 aaPredicted RBP29.52■■■□□ 2.32
CDKN2A-212ENST00000578845 ELL2O00472 640 aaPredicted RBP29.52■■■□□ 2.32
CDKN2A-212ENST00000578845 EIF6P56537 245 aaKnown RBP29.52■■■□□ 2.32
CDKN2A-212ENST00000578845 GOLGA2Q08379 1002 aa29.52■■■□□ 2.32
CDKN2A-212ENST00000578845 PHAXQ9H814 394 aaKnown RBP29.52■■■□□ 2.32
CDKN2A-212ENST00000578845 SF3B3Q15393 1217 aaKnown RBP29.51■■■□□ 2.31
CDKN2A-212ENST00000578845 TMC4Q7Z404 712 aa29.51■■■□□ 2.31
CDKN2A-212ENST00000578845 FAM89AQ96GI7 184 aa29.51■■■□□ 2.31
CDKN2A-212ENST00000578845 EPHX2P34913 555 aa29.5■■■□□ 2.31
CDKN2A-212ENST00000578845 SUPT20HQ8NEM7 779 aa29.5■■■□□ 2.31
CDKN2A-212ENST00000578845 LRRC37AA6NMS7 1700 aa29.5■■■□□ 2.31
CDKN2A-212ENST00000578845 PASKQ96RG2 1323 aa29.49■■■□□ 2.31
CDKN2A-212ENST00000578845 PPIP5K2O43314 1243 aa29.49■■■□□ 2.31
CDKN2A-212ENST00000578845 RIC3Q7Z5B4 369 aa29.49■■■□□ 2.31
CDKN2A-212ENST00000578845 PNMA8AQ86V59 439 aaPredicted RBP29.49■■■□□ 2.31
CDKN2A-212ENST00000578845 WWC1Q8IX03 1113 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms