RNA–Protein interactions for RNA: ENST00000578421.1

ACADVL-212, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 3

Gene ACADVL, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-212ENST00000578421 PIM2Q9P1W9 311 aa28.34■■■□□ 2.13
ACADVL-212ENST00000578421 SSH1Q8WYL5 1049 aa28.33■■■□□ 2.13
ACADVL-212ENST00000578421 BCL2L13Q9BXK5 485 aa28.33■■■□□ 2.13
ACADVL-212ENST00000578421 TRMT112Q9UI30 125 aaKnown RBP28.33■■■□□ 2.13
ACADVL-212ENST00000578421 BCS1LQ9Y276 419 aa28.33■■■□□ 2.13
ACADVL-212ENST00000578421 ANKRD31Q8N7Z5 1873 aa28.33■■■□□ 2.13
ACADVL-212ENST00000578421 CT47B1P0C2W7 299 aaPredicted RBP28.32■■■□□ 2.12
ACADVL-212ENST00000578421 PDZRN3Q9UPQ7 1066 aa28.32■■■□□ 2.12
ACADVL-212ENST00000578421 MRPL50Q8N5N7 158 aaKnown RBP28.31■■■□□ 2.12
ACADVL-212ENST00000578421 ZNF622Q969S3 477 aaKnown RBP eCLIP28.31■■■□□ 2.12
ACADVL-212ENST00000578421 NEXNQ0ZGT2 675 aa28.3■■■□□ 2.12
ACADVL-212ENST00000578421 TRIM28Q13263 835 aaKnown RBP28.3■■■□□ 2.12
ACADVL-212ENST00000578421 RNF123Q5XPI4 1314 aa28.29■■■□□ 2.12
ACADVL-212ENST00000578421 SH3TC1Q8TE82 1336 aa28.29■■■□□ 2.12
ACADVL-212ENST00000578421 DALRD3Q5D0E6 543 aaKnown RBP28.29■■■□□ 2.12
ACADVL-212ENST00000578421 DNAAF4Q8WXU2 420 aa28.29■■■□□ 2.12
ACADVL-212ENST00000578421 SMC4Q9NTJ3 1288 aa28.29■■■□□ 2.12
ACADVL-212ENST00000578421 CACNA1FO60840 1977 aa28.28■■■□□ 2.12
ACADVL-212ENST00000578421 SRGNP10124 158 aa28.28■■■□□ 2.12
ACADVL-212ENST00000578421 ALDH1L2Q3SY69 923 aa28.28■■■□□ 2.12
ACADVL-212ENST00000578421 SYNE4Q8N205 404 aa28.28■■■□□ 2.12
ACADVL-212ENST00000578421 F6X3S4 739 aa28.27■■■□□ 2.12
ACADVL-212ENST00000578421 RTL5Q5HYW3 569 aaPredicted RBP28.27■■■□□ 2.12
ACADVL-212ENST00000578421 CCDC191Q8NCU4 936 aa28.27■■■□□ 2.12
ACADVL-212ENST00000578421 FAM89AQ96GI7 184 aa28.27■■■□□ 2.12
ACADVL-212ENST00000578421 CWC25Q9NXE8 425 aaPredicted RBP28.27■■■□□ 2.12
ACADVL-212ENST00000578421 COL11A2P13942 1736 aaPredicted RBP28.26■■■□□ 2.12
ACADVL-212ENST00000578421 KLRG2A4D1S0 409 aaPredicted RBP28.26■■■□□ 2.11
ACADVL-212ENST00000578421 GRIN3BO60391 1043 aa28.26■■■□□ 2.11
ACADVL-212ENST00000578421 IGKV5-2P06315 115 aa28.26■■■□□ 2.11
ACADVL-212ENST00000578421 HCLS1P14317 486 aaPredicted RBP28.26■■■□□ 2.11
ACADVL-212ENST00000578421 TTLL6Q8N841 843 aa28.26■■■□□ 2.11
ACADVL-212ENST00000578421 MASTLQ96GX5 879 aa28.26■■■□□ 2.11
ACADVL-212ENST00000578421 GOLGB1Q14789 3259 aaKnown RBP28.26■■■□□ 2.11
ACADVL-212ENST00000578421 TNRC6CQ9HCJ0 1690 aaKnown RBP28.26■■■□□ 2.11
ACADVL-212ENST00000578421 CWF19L2Q2TBE0 894 aaKnown RBP28.25■■■□□ 2.11
ACADVL-212ENST00000578421 SLC10A5Q5PT55 438 aa28.25■■■□□ 2.11
ACADVL-212ENST00000578421 STYK1Q6J9G0 422 aa28.25■■■□□ 2.11
ACADVL-212ENST00000578421 RIC1Q4ADV7 1423 aa28.25■■■□□ 2.11
ACADVL-212ENST00000578421 NPR1P16066 1061 aa28.24■■■□□ 2.11
ACADVL-212ENST00000578421 C3orf67Q6ZVT6 689 aa28.24■■■□□ 2.11
ACADVL-212ENST00000578421 NLRP3Q96P20 1036 aa28.24■■■□□ 2.11
ACADVL-212ENST00000578421 BRCA1P38398 1863 aaKnown RBP28.23■■■□□ 2.11
ACADVL-212ENST00000578421 ZBTB38Q8NAP3 1195 aaPredicted RBP28.23■■■□□ 2.11
ACADVL-212ENST00000578421 DLEC1Q9Y238 1755 aa28.23■■■□□ 2.11
ACADVL-212ENST00000578421 NEURL1BA8MQ27 555 aa28.22■■■□□ 2.11
ACADVL-212ENST00000578421 RARSP54136 660 aaKnown RBP28.22■■■□□ 2.11
ACADVL-212ENST00000578421 CRY2Q49AN0 593 aa28.22■■■□□ 2.11
ACADVL-212ENST00000578421 CNKSR1Q969H4 720 aa28.22■■■□□ 2.11
ACADVL-212ENST00000578421 JARID2Q92833 1246 aaPredicted RBP28.21■■■□□ 2.11
ACADVL-212ENST00000578421 RPGRQ92834 1020 aaKnown RBP28.21■■■□□ 2.11
ACADVL-212ENST00000578421 PTPRCP08575 1304 aa28.2■■■□□ 2.11
ACADVL-212ENST00000578421 PCCAP05165 728 aaPredicted RBP28.2■■■□□ 2.1
ACADVL-212ENST00000578421 SLC4A10Q6U841 1118 aa28.2■■■□□ 2.1
ACADVL-212ENST00000578421 LINS1Q8NG48 757 aa28.2■■■□□ 2.1
ACADVL-212ENST00000578421 IRS4O14654 1257 aaPredicted RBP28.19■■■□□ 2.1
ACADVL-212ENST00000578421 ZNF219Q9P2Y4 722 aaPredicted RBP28.19■■■□□ 2.1
ACADVL-212ENST00000578421 BEND3Q5T5X7 828 aa28.18■■■□□ 2.1
ACADVL-212ENST00000578421 PRPF40BQ6NWY9 871 aaKnown RBP28.18■■■□□ 2.1
ACADVL-212ENST00000578421 UTRNP46939 3433 aa28.18■■■□□ 2.1
ACADVL-212ENST00000578421 GCKRQ14397 625 aa28.17■■■□□ 2.1
ACADVL-212ENST00000578421 ARHGAP27Q6ZUM4 889 aa28.17■■■□□ 2.1
ACADVL-212ENST00000578421 RBM17Q96I25 401 aaKnown RBP28.17■■■□□ 2.1
ACADVL-212ENST00000578421 YTHDC1Q96MU7 727 aaKnown RBP28.17■■■□□ 2.1
ACADVL-212ENST00000578421 NOB1Q9ULX3 412 aaKnown RBP28.16■■■□□ 2.1
ACADVL-212ENST00000578421 HSP90B1P14625 803 aaKnown RBP28.15■■■□□ 2.1
ACADVL-212ENST00000578421 ALDH1B1P30837 517 aa28.15■■■□□ 2.1
ACADVL-212ENST00000578421 HOXA10P31260 410 aaPredicted RBP28.15■■■□□ 2.1
ACADVL-212ENST00000578421 C21orf2O43822 256 aa28.14■■■□□ 2.1
ACADVL-212ENST00000578421 UBE3BQ7Z3V4 1068 aa28.14■■■□□ 2.1
ACADVL-212ENST00000578421 SRCIN1Q9C0H9 1055 aa28.14■■■□□ 2.1
ACADVL-212ENST00000578421 BRPF1P55201 1214 aaPredicted RBP28.13■■■□□ 2.09
ACADVL-212ENST00000578421 CDHR2Q9BYE9 1310 aa28.13■■■□□ 2.09
ACADVL-212ENST00000578421 ARFGEF1Q9Y6D6 1849 aa28.13■■■□□ 2.09
ACADVL-212ENST00000578421 DDX60Q8IY21 1712 aaKnown RBP28.12■■■□□ 2.09
ACADVL-212ENST00000578421 H7C1W4 665 aa28.12■■■□□ 2.09
ACADVL-212ENST00000578421 BCAR3O75815 825 aa28.12■■■□□ 2.09
ACADVL-212ENST00000578421 KIF16BQ96L93 1317 aa28.12■■■□□ 2.09
ACADVL-212ENST00000578421 PDE8AO60658 829 aa28.11■■■□□ 2.09
ACADVL-212ENST00000578421 DDX46Q7L014 1031 aaKnown RBP28.11■■■□□ 2.09
ACADVL-212ENST00000578421 CRAMP1Q96RY5 1269 aa28.11■■■□□ 2.09
ACADVL-212ENST00000578421 ALDH1L1O75891 902 aa28.1■■■□□ 2.09
ACADVL-212ENST00000578421 SF3B3Q15393 1217 aaKnown RBP28.1■■■□□ 2.09
ACADVL-212ENST00000578421 API5Q9BZZ5 524 aaKnown RBP28.1■■■□□ 2.09
ACADVL-212ENST00000578421 SLX4Q8IY92 1834 aa28.1■■■□□ 2.09
ACADVL-212ENST00000578421 ABCC4O15439 1325 aa28.1■■■□□ 2.09
ACADVL-212ENST00000578421 LAMB2P55268 1798 aa28.09■■■□□ 2.09
ACADVL-212ENST00000578421 CACNA1SQ13698 1873 aa28.08■■■□□ 2.09
ACADVL-212ENST00000578421 FRAT1Q92837 279 aaPredicted RBP28.08■■■□□ 2.09
ACADVL-212ENST00000578421 CASP7P55210 303 aa28.07■■■□□ 2.08
ACADVL-212ENST00000578421 SOGA3Q5TF21 947 aa28.07■■■□□ 2.08
ACADVL-212ENST00000578421 C7orf43Q8WVR3 580 aa28.07■■■□□ 2.08
ACADVL-212ENST00000578421 CCDC85AQ96PX6 553 aaPredicted RBP28.07■■■□□ 2.08
ACADVL-212ENST00000578421 C9orf78Q9NZ63 289 aaPredicted RBP28.07■■■□□ 2.08
ACADVL-212ENST00000578421 PPEF1O14829 653 aaPredicted RBP28.06■■■□□ 2.08
ACADVL-212ENST00000578421 RASSF7Q02833 373 aa28.06■■■□□ 2.08
ACADVL-212ENST00000578421 OLFM4Q6UX06 510 aa28.06■■■□□ 2.08
ACADVL-212ENST00000578421 GRM8O00222 908 aa28.05■■■□□ 2.08
ACADVL-212ENST00000578421 IPO8O15397 1037 aaKnown RBP28.05■■■□□ 2.08
ACADVL-212ENST00000578421 YY1P25490 414 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms