RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 BCORQ6W2J9 1755 aa23.01■■□□□ 1.27
PRKCA-203ENST00000578063 EPHA10Q5JZY3 1008 aa23■■□□□ 1.27
PRKCA-203ENST00000578063 ZBTB38Q8NAP3 1195 aaPredicted RBP23■■□□□ 1.27
PRKCA-203ENST00000578063 JARID2Q92833 1246 aaPredicted RBP23■■□□□ 1.27
PRKCA-203ENST00000578063 NOP58Q9Y2X3 529 aaKnown RBP23■■□□□ 1.27
PRKCA-203ENST00000578063 RTCBQ9Y3I0 505 aaKnown RBP23■■□□□ 1.27
PRKCA-203ENST00000578063 SURF6O75683 361 aaKnown RBP22.99■■□□□ 1.27
PRKCA-203ENST00000578063 GPTP24298 496 aa22.99■■□□□ 1.27
PRKCA-203ENST00000578063 LRRCC1Q9C099 1032 aa22.99■■□□□ 1.27
PRKCA-203ENST00000578063 CLEC4GQ6UXB4 293 aa22.99■■□□□ 1.27
PRKCA-203ENST00000578063 TSHZ2Q9NRE2 1034 aa22.99■■□□□ 1.27
PRKCA-203ENST00000578063 LRRC4BQ9NT99 713 aa22.99■■□□□ 1.27
PRKCA-203ENST00000578063 SCN7AQ01118 1682 aa22.98■■□□□ 1.27
PRKCA-203ENST00000578063 CDHR2Q9BYE9 1310 aa22.98■■□□□ 1.27
PRKCA-203ENST00000578063 PARP10Q53GL7 1025 aa22.98■■□□□ 1.27
PRKCA-203ENST00000578063 AK7Q96M32 723 aa22.98■■□□□ 1.27
PRKCA-203ENST00000578063 UBN2Q6ZU65 1347 aa22.97■■□□□ 1.27
PRKCA-203ENST00000578063 APBB1O00213 710 aa22.97■■□□□ 1.27
PRKCA-203ENST00000578063 FOXO4P98177 505 aa22.96■■□□□ 1.27
PRKCA-203ENST00000578063 PLA2G12BQ9BX93 195 aa22.96■■□□□ 1.27
PRKCA-203ENST00000578063 PLSCR1O15162 318 aa22.96■■□□□ 1.27
PRKCA-203ENST00000578063 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
PRKCA-203ENST00000578063 KIF1BPQ96EK5 621 aa22.96■■□□□ 1.27
PRKCA-203ENST00000578063 NARFQ9UHQ1 456 aa22.96■■□□□ 1.27
PRKCA-203ENST00000578063 ERC1Q8IUD2 1116 aa22.95■■□□□ 1.26
PRKCA-203ENST00000578063 TRMT112Q9UI30 125 aaKnown RBP22.95■■□□□ 1.26
PRKCA-203ENST00000578063 SMARCA5O60264 1052 aaPredicted RBP22.94■■□□□ 1.26
PRKCA-203ENST00000578063 ADRA2BP18089 450 aa22.94■■□□□ 1.26
PRKCA-203ENST00000578063 TXNRD1Q16881 649 aa22.94■■□□□ 1.26
PRKCA-203ENST00000578063 FAM161AQ3B820 660 aa22.94■■□□□ 1.26
PRKCA-203ENST00000578063 LMBR1LQ6UX01 489 aa22.94■■□□□ 1.26
PRKCA-203ENST00000578063 FAM89AQ96GI7 184 aa22.94■■□□□ 1.26
PRKCA-203ENST00000578063 EP400Q96L91 3159 aa22.94■■□□□ 1.26
PRKCA-203ENST00000578063 APBA3O96018 575 aa22.94■■□□□ 1.26
PRKCA-203ENST00000578063 OS9Q13438 667 aaPredicted RBP22.94■■□□□ 1.26
PRKCA-203ENST00000578063 COPRSQ9NQ92 184 aa22.94■■□□□ 1.26
PRKCA-203ENST00000578063 RHPN1Q8TCX5 695 aa22.93■■□□□ 1.26
PRKCA-203ENST00000578063 NIP7Q9Y221 180 aaKnown RBP eCLIP22.93■■□□□ 1.26
PRKCA-203ENST00000578063 ZPR1O75312 459 aa22.92■■□□□ 1.26
PRKCA-203ENST00000578063 RFX5P48382 616 aaPredicted RBP22.92■■□□□ 1.26
PRKCA-203ENST00000578063 PA2G4Q9UQ80 394 aaKnown RBP22.92■■□□□ 1.26
PRKCA-203ENST00000578063 G3BP1Q13283 466 aaKnown RBP eCLIP22.91■■□□□ 1.26
PRKCA-203ENST00000578063 TRAPPC3LQ5T215 181 aa22.91■■□□□ 1.26
PRKCA-203ENST00000578063 PLEKHM2Q8IWE5 1019 aa22.91■■□□□ 1.26
PRKCA-203ENST00000578063 UTP14AQ9BVJ6 771 aaKnown RBP22.91■■□□□ 1.26
PRKCA-203ENST00000578063 BACH2Q9BYV9 841 aa22.91■■□□□ 1.26
PRKCA-203ENST00000578063 TNS1Q9HBL0 1735 aaKnown RBP22.91■■□□□ 1.26
PRKCA-203ENST00000578063 SH3TC1Q8TE82 1336 aa22.91■■□□□ 1.26
PRKCA-203ENST00000578063 SUSD4Q5VX71 490 aa22.91■■□□□ 1.26
PRKCA-203ENST00000578063 ARHGEF1Q92888 912 aaKnown RBP22.91■■□□□ 1.26
PRKCA-203ENST00000578063 CHMP3Q9Y3E7 222 aa22.91■■□□□ 1.26
PRKCA-203ENST00000578063 RGPD3A6NKT7 1758 aaPredicted RBP22.9■■□□□ 1.26
PRKCA-203ENST00000578063 RGPD4Q7Z3J3 1758 aa22.9■■□□□ 1.26
PRKCA-203ENST00000578063 IRS4O14654 1257 aaPredicted RBP22.9■■□□□ 1.26
PRKCA-203ENST00000578063 HSP90B1P14625 803 aaKnown RBP22.9■■□□□ 1.26
PRKCA-203ENST00000578063 ILDR1Q86SU0 546 aaPredicted RBP22.9■■□□□ 1.26
PRKCA-203ENST00000578063 RFC4P35249 363 aa22.89■■□□□ 1.26
PRKCA-203ENST00000578063 PTPN12Q05209 780 aaKnown RBP22.89■■□□□ 1.26
PRKCA-203ENST00000578063 BMP2KLQ5H9B9 411 aa22.89■■□□□ 1.26
PRKCA-203ENST00000578063 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.26
PRKCA-203ENST00000578063 C16orf71Q8IYS4 520 aaPredicted RBP22.89■■□□□ 1.26
PRKCA-203ENST00000578063 PROM2Q8N271 834 aa22.89■■□□□ 1.26
PRKCA-203ENST00000578063 BCL2L12Q9HB09 334 aa22.89■■□□□ 1.26
PRKCA-203ENST00000578063 USP42Q9H9J4 1324 aaKnown RBP22.89■■□□□ 1.25
PRKCA-203ENST00000578063 C4AP0C0L4 1744 aa22.89■■□□□ 1.25
PRKCA-203ENST00000578063 SSFA2P28290 1259 aa22.88■■□□□ 1.25
PRKCA-203ENST00000578063 C8orf34Q49A92 452 aa22.88■■□□□ 1.25
PRKCA-203ENST00000578063 AMIGO3Q86WK7 504 aa22.88■■□□□ 1.25
PRKCA-203ENST00000578063 PDE8AO60658 829 aa22.88■■□□□ 1.25
PRKCA-203ENST00000578063 NTSR2O95665 410 aa22.88■■□□□ 1.25
PRKCA-203ENST00000578063 CSF1RP07333 972 aa22.88■■□□□ 1.25
PRKCA-203ENST00000578063 OTUD7AQ8TE49 926 aaPredicted RBP22.88■■□□□ 1.25
PRKCA-203ENST00000578063 SRP68Q9UHB9 627 aaKnown RBP22.88■■□□□ 1.25
PRKCA-203ENST00000578063 UBR3Q6ZT12 1888 aa22.87■■□□□ 1.25
PRKCA-203ENST00000578063 PHF14O94880 888 aa22.87■■□□□ 1.25
PRKCA-203ENST00000578063 CTSWP56202 376 aa22.87■■□□□ 1.25
PRKCA-203ENST00000578063 SMIM5Q71RC9 77 aa22.87■■□□□ 1.25
PRKCA-203ENST00000578063 BCL11AQ9H165 835 aa22.87■■□□□ 1.25
PRKCA-203ENST00000578063 OSBPL3Q9H4L5 887 aa22.87■■□□□ 1.25
PRKCA-203ENST00000578063 IL1RAPL2Q9NP60 686 aa22.87■■□□□ 1.25
PRKCA-203ENST00000578063 SALL3Q9BXA9 1300 aa22.87■■□□□ 1.25
PRKCA-203ENST00000578063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.86■■□□□ 1.25
PRKCA-203ENST00000578063 SYNE4Q8N205 404 aa22.86■■□□□ 1.25
PRKCA-203ENST00000578063 CLASRPQ8N2M8 674 aaKnown RBP22.86■■□□□ 1.25
PRKCA-203ENST00000578063 KLHDC4Q8TBB5 520 aa22.86■■□□□ 1.25
PRKCA-203ENST00000578063 SIL1Q9H173 461 aa22.86■■□□□ 1.25
PRKCA-203ENST00000578063 CCDC57Q2TAC2 916 aa22.85■■□□□ 1.25
PRKCA-203ENST00000578063 MX1P20591 662 aa22.85■■□□□ 1.25
PRKCA-203ENST00000578063 TBC1D9BQ66K14 1250 aa22.85■■□□□ 1.25
PRKCA-203ENST00000578063 SASH1O94885 1247 aa22.84■■□□□ 1.25
PRKCA-203ENST00000578063 PDE1AP54750 535 aa22.84■■□□□ 1.25
PRKCA-203ENST00000578063 TTC22Q5TAA0 569 aa22.84■■□□□ 1.25
PRKCA-203ENST00000578063 TTLL11Q8NHH1 800 aa22.84■■□□□ 1.25
PRKCA-203ENST00000578063 FBXO3Q9UK99 471 aa22.84■■□□□ 1.25
PRKCA-203ENST00000578063 AOX1Q06278 1338 aa22.84■■□□□ 1.25
PRKCA-203ENST00000578063 COL24A1Q17RW2 1714 aa22.84■■□□□ 1.25
PRKCA-203ENST00000578063 FAM177BA6PVY3 158 aa22.83■■□□□ 1.25
PRKCA-203ENST00000578063 IFIT5Q13325 482 aaKnown RBP22.83■■□□□ 1.25
PRKCA-203ENST00000578063 SETDB2Q96T68 719 aa22.83■■□□□ 1.25
PRKCA-203ENST00000578063 NYXQ9GZU5 481 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms