RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
ATP2A3-215ENST00000576957 ZNF34Q8IZ26 560 aa17.34■□□□□ 0.37
ATP2A3-215ENST00000576957 SYNE4Q8N205 404 aa17.34■□□□□ 0.37
ATP2A3-215ENST00000576957 RPGRQ92834 1020 aaKnown RBP17.34■□□□□ 0.37
ATP2A3-215ENST00000576957 ABCC12Q96J65 1359 aa17.34■□□□□ 0.37
ATP2A3-215ENST00000576957 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
ATP2A3-215ENST00000576957 SNED1Q8TER0 1413 aa17.33■□□□□ 0.36
ATP2A3-215ENST00000576957 UBN2Q6ZU65 1347 aa17.33■□□□□ 0.36
ATP2A3-215ENST00000576957 ZNF541Q9H0D2 1346 aa17.33■□□□□ 0.36
ATP2A3-215ENST00000576957 ZBTB3Q9H5J0 574 aa17.33■□□□□ 0.36
ATP2A3-215ENST00000576957 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.36
ATP2A3-215ENST00000576957 HACL1Q9UJ83 578 aa17.33■□□□□ 0.36
ATP2A3-215ENST00000576957 HSPA1AP0DMV8 641 aaKnown RBP17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 HSPA1BP0DMV9 641 aaKnown RBP17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 GPTP24298 496 aa17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 RIPK4P57078 832 aa17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 LMOD3Q0VAK6 560 aa17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 PARP10Q53GL7 1025 aa17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 SUSD4Q5VX71 490 aa17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 ERICH6BQ5W0A0 696 aa17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 PPP1R42Q7Z4L9 355 aa17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 JDP2Q8WYK2 163 aa17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 CRAMP1Q96RY5 1269 aa17.32■□□□□ 0.36
ATP2A3-215ENST00000576957 PASKQ96RG2 1323 aa17.31■□□□□ 0.36
ATP2A3-215ENST00000576957 NTSR2O95665 410 aa17.31■□□□□ 0.36
ATP2A3-215ENST00000576957 PNMA8AQ86V59 439 aaPredicted RBP17.31■□□□□ 0.36
ATP2A3-215ENST00000576957 GPC2Q8N158 579 aa17.31■□□□□ 0.36
ATP2A3-215ENST00000576957 RBM17Q96I25 401 aaKnown RBP17.31■□□□□ 0.36
ATP2A3-215ENST00000576957 EPHX2P34913 555 aa17.3■□□□□ 0.36
ATP2A3-215ENST00000576957 PDIA6Q15084 440 aa17.3■□□□□ 0.36
ATP2A3-215ENST00000576957 LRP10Q7Z4F1 713 aa17.3■□□□□ 0.36
ATP2A3-215ENST00000576957 ITGBL1O95965 494 aaPredicted RBP17.29■□□□□ 0.36
ATP2A3-215ENST00000576957 TMPOP42166 694 aaKnown RBP17.29■□□□□ 0.36
ATP2A3-215ENST00000576957 EAPPQ56P03 285 aaPredicted RBP17.29■□□□□ 0.36
ATP2A3-215ENST00000576957 NLRP3Q96P20 1036 aa17.29■□□□□ 0.36
ATP2A3-215ENST00000576957 RNF123Q5XPI4 1314 aa17.28■□□□□ 0.36
ATP2A3-215ENST00000576957 EIF2S2P20042 333 aaKnown RBP17.28■□□□□ 0.36
ATP2A3-215ENST00000576957 EIF6P56537 245 aaKnown RBP17.28■□□□□ 0.36
ATP2A3-215ENST00000576957 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
ATP2A3-215ENST00000576957 MKRN1Q9UHC7 482 aaKnown RBP17.28■□□□□ 0.36
ATP2A3-215ENST00000576957 CNTNAP1P78357 1384 aa17.28■□□□□ 0.36
ATP2A3-215ENST00000576957 TMEM88BA6NKF7 163 aa17.27■□□□□ 0.36
ATP2A3-215ENST00000576957 PPEF1O14829 653 aaPredicted RBP17.27■□□□□ 0.36
ATP2A3-215ENST00000576957 TNS4Q8IZW8 715 aa17.27■□□□□ 0.36
ATP2A3-215ENST00000576957 UTP14AQ9BVJ6 771 aaKnown RBP17.27■□□□□ 0.36
ATP2A3-215ENST00000576957 VPS33BQ9H267 617 aa17.27■□□□□ 0.36
ATP2A3-215ENST00000576957 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
ATP2A3-215ENST00000576957 ADAMTSL1Q8N6G6 1762 aa17.27■□□□□ 0.35
ATP2A3-215ENST00000576957 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
ATP2A3-215ENST00000576957 TMX4Q9H1E5 349 aaPredicted RBP17.26■□□□□ 0.35
ATP2A3-215ENST00000576957 LARGE2Q8N3Y3 721 aa17.25■□□□□ 0.35
ATP2A3-215ENST00000576957 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
ATP2A3-215ENST00000576957 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
ATP2A3-215ENST00000576957 PROSER3Q2NL68 480 aa17.24■□□□□ 0.35
ATP2A3-215ENST00000576957 C3orf67Q6ZVT6 689 aa17.24■□□□□ 0.35
ATP2A3-215ENST00000576957 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
ATP2A3-215ENST00000576957 ATP6V0A2Q9Y487 856 aa17.24■□□□□ 0.35
ATP2A3-215ENST00000576957 COL4A5P29400 1685 aa17.23■□□□□ 0.35
ATP2A3-215ENST00000576957 CHL1O00533 1208 aa17.23■□□□□ 0.35
ATP2A3-215ENST00000576957 COPS6Q7L5N1 327 aa17.23■□□□□ 0.35
ATP2A3-215ENST00000576957 DDX21Q9NR30 783 aaKnown RBP eCLIP17.23■□□□□ 0.35
ATP2A3-215ENST00000576957 GJA3Q9Y6H8 435 aa17.23■□□□□ 0.35
ATP2A3-215ENST00000576957 TCERG1O14776 1098 aaKnown RBP17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 BBOX1O75936 387 aa17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 ANXA1P04083 346 aa17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 TCIRG1Q13488 830 aa17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 MAP1SQ66K74 1059 aaPredicted RBP17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 NLRP10Q86W26 655 aa17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 XAGE3Q8WTP9 111 aa17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
ATP2A3-215ENST00000576957 ANKRD36CQ5JPF3 1778 aa17.21■□□□□ 0.35
ATP2A3-215ENST00000576957 SCNN1DP51172 638 aa17.21■□□□□ 0.35
ATP2A3-215ENST00000576957 USP50Q70EL3 339 aaPredicted RBP17.21■□□□□ 0.35
ATP2A3-215ENST00000576957 RTFDC1Q9BY42 306 aaPredicted RBP17.21■□□□□ 0.35
ATP2A3-215ENST00000576957 ABCC4O15439 1325 aa17.21■□□□□ 0.34
ATP2A3-215ENST00000576957 RASSF10A6NK89 507 aa17.2■□□□□ 0.34
ATP2A3-215ENST00000576957 PPIP5K2O43314 1243 aa17.2■□□□□ 0.34
ATP2A3-215ENST00000576957 HOXB7P09629 217 aa17.2■□□□□ 0.34
ATP2A3-215ENST00000576957 VEGFBP49765 207 aa17.2■□□□□ 0.34
ATP2A3-215ENST00000576957 AIMP1Q12904 312 aaKnown RBP17.2■□□□□ 0.34
ATP2A3-215ENST00000576957 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
ATP2A3-215ENST00000576957 SP8Q8IXZ3 490 aa17.2■□□□□ 0.34
ATP2A3-215ENST00000576957 SH3TC1Q8TE82 1336 aa17.2■□□□□ 0.34
ATP2A3-215ENST00000576957 EPS15P42566 896 aa17.19■□□□□ 0.34
ATP2A3-215ENST00000576957 WDR43Q15061 677 aaKnown RBP eCLIP17.19■□□□□ 0.34
ATP2A3-215ENST00000576957 DEFB115Q30KQ5 88 aa17.19■□□□□ 0.34
ATP2A3-215ENST00000576957 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
ATP2A3-215ENST00000576957 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
ATP2A3-215ENST00000576957 TRMT112Q9UI30 125 aaKnown RBP17.19■□□□□ 0.34
ATP2A3-215ENST00000576957 TRIM35Q9UPQ4 493 aa17.19■□□□□ 0.34
ATP2A3-215ENST00000576957 LTBP1Q14766 1721 aa17.18■□□□□ 0.34
ATP2A3-215ENST00000576957 AOC3Q16853 763 aa17.18■□□□□ 0.34
ATP2A3-215ENST00000576957 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
ATP2A3-215ENST00000576957 DDX46Q7L014 1031 aaKnown RBP17.18■□□□□ 0.34
ATP2A3-215ENST00000576957 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
ATP2A3-215ENST00000576957 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
ATP2A3-215ENST00000576957 PRDM10Q9NQV6 1147 aa17.18■□□□□ 0.34
ATP2A3-215ENST00000576957 ZNRF3Q9ULT6 936 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms