RNA–Protein interactions for RNA: ENST00000576761.5

PITPNA-211, Transcript of phosphatidylinositol transfer protein alpha, human

TSL 4

Gene PITPNA, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PITPNA-211	ENST00000576761	HSP90AB3P	Q58FF7	597 aa		33.58	■■■□□ 2.97
PITPNA-211	ENST00000576761	IFT57	Q9NWB7	429 aa		33.58	■■■□□ 2.97
PITPNA-211	ENST00000576761	GNAI1	P63096	354 aa		33.57	■■■□□ 2.96
PITPNA-211	ENST00000576761	CCDC184	Q52MB2	194 aa		33.57	■■■□□ 2.96
PITPNA-211	ENST00000576761	DPY19L2	Q6NUT2	758 aa		33.57	■■■□□ 2.96
PITPNA-211	ENST00000576761	RPGR	Q92834	1020 aa	Known RBP	33.57	■■■□□ 2.96
PITPNA-211	ENST00000576761	DUSP27	Q5VZP5	1158 aa		33.56	■■■□□ 2.96
PITPNA-211	ENST00000576761	UTP14A	Q9BVJ6	771 aa	Known RBP	33.56	■■■□□ 2.96
PITPNA-211	ENST00000576761	DBF4	Q9UBU7	674 aa	Predicted RBP	33.56	■■■□□ 2.96
PITPNA-211	ENST00000576761	RTKN2	Q8IZC4	609 aa		33.55	■■■□□ 2.96
PITPNA-211	ENST00000576761	RNF123	Q5XPI4	1314 aa		33.53	■■■□□ 2.96
PITPNA-211	ENST00000576761	VEGFA	P15692	232 aa	Predicted RBP	33.53	■■■□□ 2.96
PITPNA-211	ENST00000576761	HOXA10	P31260	410 aa	Predicted RBP	33.53	■■■□□ 2.96
PITPNA-211	ENST00000576761	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.53	■■■□□ 2.96
PITPNA-211	ENST00000576761	CEP350	Q5VT06	3117 aa		33.53	■■■□□ 2.96
PITPNA-211	ENST00000576761	TCIRG1	Q13488	830 aa		33.52	■■■□□ 2.96
PITPNA-211	ENST00000576761	WDR90	Q96KV7	1748 aa		33.52	■■■□□ 2.96
PITPNA-211	ENST00000576761	ANP32C	O43423	234 aa		33.51	■■■□□ 2.95
PITPNA-211	ENST00000576761	FSTL1	Q12841	308 aa		33.51	■■■□□ 2.95
PITPNA-211	ENST00000576761	OLFM4	Q6UX06	510 aa		33.51	■■■□□ 2.95
PITPNA-211	ENST00000576761	RBM17	Q96I25	401 aa	Known RBP	33.51	■■■□□ 2.95
PITPNA-211	ENST00000576761	NLRP3	Q96P20	1036 aa		33.51	■■■□□ 2.95
PITPNA-211	ENST00000576761	HYPK	Q9NX55	129 aa		33.51	■■■□□ 2.95
PITPNA-211	ENST00000576761	SLC10A5	Q5PT55	438 aa		33.5	■■■□□ 2.95
PITPNA-211	ENST00000576761	NLRP10	Q86W26	655 aa		33.5	■■■□□ 2.95
PITPNA-211	ENST00000576761	PLBD2	Q8NHP8	589 aa		33.49	■■■□□ 2.95
PITPNA-211	ENST00000576761	CRAMP1	Q96RY5	1269 aa		33.49	■■■□□ 2.95
PITPNA-211	ENST00000576761	APLP1	P51693	650 aa		33.48	■■■□□ 2.95
PITPNA-211	ENST00000576761	CC2D2B	Q6DHV5	1058 aa		33.48	■■■□□ 2.95
PITPNA-211	ENST00000576761	ANKRD13D	Q6ZTN6	518 aa		33.48	■■■□□ 2.95
PITPNA-211	ENST00000576761	C3orf67	Q6ZVT6	689 aa		33.47	■■■□□ 2.95
PITPNA-211	ENST00000576761	MRS2	Q9HD23	443 aa		33.46	■■■□□ 2.95
PITPNA-211	ENST00000576761	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.46	■■■□□ 2.95
PITPNA-211	ENST00000576761	LAMB2	P55268	1798 aa		33.46	■■■□□ 2.95
PITPNA-211	ENST00000576761	SMC1B	Q8NDV3	1235 aa		33.45	■■■□□ 2.95
PITPNA-211	ENST00000576761	TRMT112	Q9UI30	125 aa	Known RBP	33.45	■■■□□ 2.95
PITPNA-211	ENST00000576761	SNED1	Q8TER0	1413 aa		33.45	■■■□□ 2.94
PITPNA-211	ENST00000576761	CCDC27	Q2M243	656 aa		33.44	■■■□□ 2.94
PITPNA-211	ENST00000576761	GRIPAP1	Q4V328	841 aa		33.44	■■■□□ 2.94
PITPNA-211	ENST00000576761	SYNE4	Q8N205	404 aa		33.44	■■■□□ 2.94
PITPNA-211	ENST00000576761	PSMD1	Q99460	953 aa		33.44	■■■□□ 2.94
PITPNA-211	ENST00000576761	ELL2	O00472	640 aa	Predicted RBP	33.43	■■■□□ 2.94
PITPNA-211	ENST00000576761	SH3TC1	Q8TE82	1336 aa		33.43	■■■□□ 2.94
PITPNA-211	ENST00000576761	POTEC	B2RU33	542 aa		33.42	■■■□□ 2.94
PITPNA-211	ENST00000576761	PPEF1	O14829	653 aa	Predicted RBP	33.42	■■■□□ 2.94
PITPNA-211	ENST00000576761	CHMP4A	Q9BY43	222 aa		33.42	■■■□□ 2.94
PITPNA-211	ENST00000576761	IARS	P41252	1262 aa	Known RBP	33.41	■■■□□ 2.94
PITPNA-211	ENST00000576761	DDN	O94850	711 aa	Predicted RBP	33.4	■■■□□ 2.94
PITPNA-211	ENST00000576761	HCLS1	P14317	486 aa	Predicted RBP	33.4	■■■□□ 2.94
PITPNA-211	ENST00000576761	C8orf58	Q8NAV2	365 aa		33.4	■■■□□ 2.94
PITPNA-211	ENST00000576761	ISCA1	Q9BUE6	129 aa		33.39	■■■□□ 2.94
PITPNA-211	ENST00000576761	WWC1	Q8IX03	1113 aa		33.38	■■■□□ 2.93
PITPNA-211	ENST00000576761	TMX4	Q9H1E5	349 aa	Predicted RBP	33.38	■■■□□ 2.93
PITPNA-211	ENST00000576761	GOLGA2	Q08379	1002 aa		33.37	■■■□□ 2.93
PITPNA-211	ENST00000576761	NCBP3	Q53F19	620 aa	Known RBP	33.37	■■■□□ 2.93
PITPNA-211	ENST00000576761	SCN4A	P35499	1836 aa		33.37	■■■□□ 2.93
PITPNA-211	ENST00000576761	DDX60	Q8IY21	1712 aa	Known RBP	33.36	■■■□□ 2.93
PITPNA-211	ENST00000576761	ABCC4	O15439	1325 aa		33.36	■■■□□ 2.93
PITPNA-211	ENST00000576761	TCERG1	O14776	1098 aa	Known RBP	33.36	■■■□□ 2.93
PITPNA-211	ENST00000576761	RIC3	Q7Z5B4	369 aa		33.36	■■■□□ 2.93
PITPNA-211	ENST00000576761	PHAX	Q9H814	394 aa	Known RBP	33.36	■■■□□ 2.93
PITPNA-211	ENST00000576761	ATP5J2-PTCD1	G3V325	749 aa		33.35	■■■□□ 2.93
PITPNA-211	ENST00000576761	CCDC30	Q5VVM6	783 aa		33.35	■■■□□ 2.93
PITPNA-211	ENST00000576761	ATP6V0A2	Q9Y487	856 aa		33.35	■■■□□ 2.93
PITPNA-211	ENST00000576761	TRIM28	Q13263	835 aa	Known RBP	33.34	■■■□□ 2.93
PITPNA-211	ENST00000576761	JDP2	Q8WYK2	163 aa		33.34	■■■□□ 2.93
PITPNA-211	ENST00000576761	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.34	■■■□□ 2.93
PITPNA-211	ENST00000576761	ZNF541	Q9H0D2	1346 aa		33.33	■■■□□ 2.93
PITPNA-211	ENST00000576761	FZD9	O00144	591 aa		33.33	■■■□□ 2.93
PITPNA-211	ENST00000576761	BBOX1	O75936	387 aa		33.33	■■■□□ 2.93
PITPNA-211	ENST00000576761	DDX46	Q7L014	1031 aa	Known RBP	33.33	■■■□□ 2.93
PITPNA-211	ENST00000576761	TSR2	Q969E8	191 aa	Known RBP	33.33	■■■□□ 2.93
PITPNA-211	ENST00000576761	ZNF428	Q96B54	188 aa		33.33	■■■□□ 2.93
PITPNA-211	ENST00000576761	IQCA1L	A6NCM1	817 aa		33.32	■■■□□ 2.92
PITPNA-211	ENST00000576761	IL16	Q14005	1332 aa		33.31	■■■□□ 2.92
PITPNA-211	ENST00000576761	TSPYL6	Q8N831	410 aa		33.31	■■■□□ 2.92
PITPNA-211	ENST00000576761	FAM89A	Q96GI7	184 aa		33.31	■■■□□ 2.92
PITPNA-211	ENST00000576761	SLC51A	Q86UW1	340 aa		33.3	■■■□□ 2.92
PITPNA-211	ENST00000576761	TAF1	P21675	1872 aa		33.29	■■■□□ 2.92
PITPNA-211	ENST00000576761	DDX58	O95786	925 aa	Known RBP	33.29	■■■□□ 2.92
PITPNA-211	ENST00000576761	GRAP	Q13588	217 aa		33.28	■■■□□ 2.92
PITPNA-211	ENST00000576761	SP8	Q8IXZ3	490 aa		33.28	■■■□□ 2.92
PITPNA-211	ENST00000576761	LARGE2	Q8N3Y3	721 aa		33.28	■■■□□ 2.92
PITPNA-211	ENST00000576761	GRAPL	Q8TC17	118 aa	Predicted RBP	33.28	■■■□□ 2.92
PITPNA-211	ENST00000576761	DNAJC5G	Q8N7S2	189 aa		33.27	■■■□□ 2.92
PITPNA-211	ENST00000576761	COL4A5	P29400	1685 aa		33.26	■■■□□ 2.92
PITPNA-211	ENST00000576761	GPC2	Q8N158	579 aa		33.26	■■■□□ 2.91
PITPNA-211	ENST00000576761	MYD88	Q99836	296 aa		33.26	■■■□□ 2.91
PITPNA-211	ENST00000576761	VPS33B	Q9H267	617 aa		33.26	■■■□□ 2.91
PITPNA-211	ENST00000576761	EIF6	P56537	245 aa	Known RBP	33.25	■■■□□ 2.91
PITPNA-211	ENST00000576761	SF3B3	Q15393	1217 aa	Known RBP	33.25	■■■□□ 2.91
PITPNA-211	ENST00000576761	RTL5	Q5HYW3	569 aa	Predicted RBP	33.25	■■■□□ 2.91
PITPNA-211	ENST00000576761	TMC4	Q7Z404	712 aa		33.25	■■■□□ 2.91
PITPNA-211	ENST00000576761	SUPT20H	Q8NEM7	779 aa		33.25	■■■□□ 2.91
PITPNA-211	ENST00000576761	STK31	Q9BXU1	1019 aa		33.25	■■■□□ 2.91
PITPNA-211	ENST00000576761	TWISTNB	Q3B726	338 aa	Predicted RBP	33.24	■■■□□ 2.91
PITPNA-211	ENST00000576761	CHADL	Q6NUI6	762 aa		33.24	■■■□□ 2.91
PITPNA-211	ENST00000576761	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.24	■■■□□ 2.91
PITPNA-211	ENST00000576761	HACL1	Q9UJ83	578 aa		33.24	■■■□□ 2.91
PITPNA-211	ENST00000576761	IRS4	O14654	1257 aa	Predicted RBP	33.23	■■■□□ 2.91

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms