RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CEP131Q9UPN4 1083 aa15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 GOLGA8BA8MQT2 603 aa15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 LMOD1P29536 600 aaPredicted RBP15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 CBX8Q9HC52 389 aa15.18■□□□□ 0.02
PCDHGB3-201ENST00000576222 MAGI2Q86UL8 1455 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 GTF2A1P52655 376 aaPredicted RBP15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 CCDC102BQ68D86 513 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 GIMAP7Q8NHV1 300 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 LRRC2Q9BYS8 371 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 USP16Q9Y5T5 823 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 CCDC57Q2TAC2 916 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 NACAP1Q9BZK3 213 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 ELF2Q15723 593 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 ODF2Q5BJF6 829 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 GPATCH11Q8N954 259 aa15.17■□□□□ 0.02
PCDHGB3-201ENST00000576222 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 SYKP43405 635 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 RUFY3Q7L099 469 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 KCNG4Q8TDN1 519 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 IFNKQ9P0W0 207 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 MSH6P52701 1360 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 CAPN2P17655 700 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 FAM173BQ6P4H8 233 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 CNNM1Q9NRU3 951 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 SYCP2Q9BX26 1530 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 IFIT1P09914 478 aaKnown RBP15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 CREB3L3Q68CJ9 461 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 RSPH14Q9UHP6 348 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 MAGI3Q5TCQ9 1506 aa15.16■□□□□ 0.02
PCDHGB3-201ENST00000576222 UTP14CQ5TAP6 766 aaKnown RBP15.15■□□□□ 0.02
PCDHGB3-201ENST00000576222 ABCC2Q92887 1545 aa15.15■□□□□ 0.02
PCDHGB3-201ENST00000576222 CTR9Q6PD62 1173 aa15.15■□□□□ 0.02
PCDHGB3-201ENST00000576222 C10orf67Q8IYJ2 551 aa15.15■□□□□ 0.02
PCDHGB3-201ENST00000576222 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB3-201ENST00000576222 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB3-201ENST00000576222 Q6ZUG5 572 aa15.15■□□□□ 0.02
PCDHGB3-201ENST00000576222 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
PCDHGB3-201ENST00000576222 TTC41PQ6P2S7 1318 aa15.15■□□□□ 0.02
PCDHGB3-201ENST00000576222 MTMR7Q9Y216 660 aa15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 RASSF4Q9H2L5 321 aa15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 MAP3K2Q9Y2U5 619 aa15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 A0A1W2PP64 1363 aa15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 CLSTN2Q9H4D0 955 aa15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 KDM5BQ9UGL1 1544 aa15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 ZNF608Q9ULD9 1512 aaPredicted RBP15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 ERLIN2O94905 339 aa15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 NMIQ13287 307 aaPredicted RBP15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 HSP90AB2PQ58FF8 381 aa15.14■□□□□ 0.01
PCDHGB3-201ENST00000576222 ANXA1P04083 346 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 MYD88Q99836 296 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 ADGRL1O94910 1474 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 YEATS4O95619 227 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 LIG1P18858 919 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 HSP90AA4PQ58FG1 418 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 UBAC1Q9BSL1 405 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 MNAT1P51948 309 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 SPA17Q15506 151 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 RTL1A6NKG5 1358 aa15.13■□□□□ 0.01
PCDHGB3-201ENST00000576222 CTAGE15A4D2H0 777 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 ZNF213O14771 459 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 CTAGE8P0CG41 777 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 CTAGE6Q86UF2 777 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 CTAGE4Q8IX94 777 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 USHBP1Q8N6Y0 703 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 SGSM2O43147 1006 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 IPO4Q8TEX9 1081 aaKnown RBP15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 CDK5RAP3Q96JB5 506 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 GOLIM4O00461 696 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 EVCP57679 992 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 HYPKQ9NX55 129 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 GOLGA6L7A0A1B0GV03 622 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 SLC26A8Q96RN1 970 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
PCDHGB3-201ENST00000576222 VPS18Q9P253 973 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 RAD50Q92878 1312 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 DTNBO60941 627 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 HSPA4P34932 840 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 TDO2P48775 406 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 EVA1CP58658 441 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 EIF4A2Q14240 407 aaKnown RBP15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 KRBA2Q6ZNG9 492 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 G2E3Q7L622 706 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 RAB11FIP4Q86YS3 637 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 ABCC4O15439 1325 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 SPTLC2O15270 562 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 ESCO1Q5FWF5 840 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 MICALCLQ6ZW33 695 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 CEP112Q8N8E3 955 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 UTP14AQ9BVJ6 771 aaKnown RBP15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 PYCARDQ9ULZ3 195 aa15.11■□□□□ 0.01
PCDHGB3-201ENST00000576222 IBSPP21815 317 aaPredicted RBP15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 LRMPQ12912 555 aa15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 RNF187Q5TA31 235 aaPredicted RBP15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 CCDC82Q8N4S0 544 aa15.1■□□□□ 0.01
PCDHGB3-201ENST00000576222 PTPRTO14522 1441 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms