RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 NUDCQ9Y266 331 aa13.32□□□□□ -0.28
CALCOCO2-227ENST00000575560 U2AF1L5P0DN76 240 aaPredicted RBP13.31□□□□□ -0.28
CALCOCO2-227ENST00000575560 SCNN1DP51172 638 aa13.31□□□□□ -0.28
CALCOCO2-227ENST00000575560 EIF6P56537 245 aaKnown RBP13.31□□□□□ -0.28
CALCOCO2-227ENST00000575560 U2AF1Q01081 240 aaKnown RBP eCLIP13.31□□□□□ -0.28
CALCOCO2-227ENST00000575560 GRIPAP1Q4V328 841 aa13.31□□□□□ -0.28
CALCOCO2-227ENST00000575560 NUTM1Q86Y26 1132 aa13.31□□□□□ -0.28
CALCOCO2-227ENST00000575560 NYXQ9GZU5 481 aa13.31□□□□□ -0.28
CALCOCO2-227ENST00000575560 ABT1Q9ULW3 272 aaKnown RBP13.31□□□□□ -0.28
CALCOCO2-227ENST00000575560 COL4A5P29400 1685 aa13.31□□□□□ -0.28
CALCOCO2-227ENST00000575560 EPS15P42566 896 aa13.3□□□□□ -0.28
CALCOCO2-227ENST00000575560 FMR1Q06787 632 aaKnown RBP eCLIP13.3□□□□□ -0.28
CALCOCO2-227ENST00000575560 CST9Q5W186 159 aa13.3□□□□□ -0.28
CALCOCO2-227ENST00000575560 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
CALCOCO2-227ENST00000575560 GJA3Q9Y6H8 435 aa13.3□□□□□ -0.28
CALCOCO2-227ENST00000575560 ABCC12Q96J65 1359 aa13.3□□□□□ -0.28
CALCOCO2-227ENST00000575560 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
CALCOCO2-227ENST00000575560 USP50Q70EL3 339 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO2-227ENST00000575560 CAPNS2Q96L46 248 aa13.29□□□□□ -0.28
CALCOCO2-227ENST00000575560 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
CALCOCO2-227ENST00000575560 MAP3K15Q6ZN16 1313 aa13.29□□□□□ -0.28
CALCOCO2-227ENST00000575560 LTBP1Q14766 1721 aa13.28□□□□□ -0.28
CALCOCO2-227ENST00000575560 LMOD1P29536 600 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO2-227ENST00000575560 TTLL7Q6ZT98 887 aa13.28□□□□□ -0.28
CALCOCO2-227ENST00000575560 LARGE2Q8N3Y3 721 aa13.28□□□□□ -0.28
CALCOCO2-227ENST00000575560 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
CALCOCO2-227ENST00000575560 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
CALCOCO2-227ENST00000575560 GPR101Q96P66 508 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO2-227ENST00000575560 UBN2Q6ZU65 1347 aa13.28□□□□□ -0.28
CALCOCO2-227ENST00000575560 RIC1Q4ADV7 1423 aa13.28□□□□□ -0.28
CALCOCO2-227ENST00000575560 TRAF5O00463 557 aa13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 SLC34A2O95436 690 aa13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 PPP2R1AP30153 589 aa13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 ECE1P42892 770 aa13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 SUSD4Q5VX71 490 aa13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 CYP4F22Q6NT55 531 aa13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 SLC51AQ86UW1 340 aa13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 ZNF34Q8IZ26 560 aa13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 RBM17Q96I25 401 aaKnown RBP13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 TLL2Q9Y6L7 1015 aa13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 IBTKQ9P2D0 1353 aaPredicted RBP13.27□□□□□ -0.29
CALCOCO2-227ENST00000575560 MAP2K2P36507 400 aa13.26□□□□□ -0.29
CALCOCO2-227ENST00000575560 RGS19P49795 217 aa13.26□□□□□ -0.29
CALCOCO2-227ENST00000575560 EIF4A1P60842 406 aaKnown RBP13.26□□□□□ -0.29
CALCOCO2-227ENST00000575560 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
CALCOCO2-227ENST00000575560 PNISRQ8TF01 805 aaKnown RBP13.26□□□□□ -0.29
CALCOCO2-227ENST00000575560 VPS33BQ9H267 617 aa13.26□□□□□ -0.29
CALCOCO2-227ENST00000575560 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
CALCOCO2-227ENST00000575560 PPEF1O14829 653 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO2-227ENST00000575560 NTSR2O95665 410 aa13.25□□□□□ -0.29
CALCOCO2-227ENST00000575560 GPTP24298 496 aa13.25□□□□□ -0.29
CALCOCO2-227ENST00000575560 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
CALCOCO2-227ENST00000575560 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
CALCOCO2-227ENST00000575560 NIM1KQ8IY84 436 aa13.25□□□□□ -0.29
CALCOCO2-227ENST00000575560 BEGAINQ9BUH8 593 aa13.25□□□□□ -0.29
CALCOCO2-227ENST00000575560 ADARB2Q9NS39 739 aaKnown RBP13.25□□□□□ -0.29
CALCOCO2-227ENST00000575560 GPRC5DQ9NZD1 345 aa13.25□□□□□ -0.29
CALCOCO2-227ENST00000575560 THSD7BQ9C0I4 1608 aa13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 MYL6BP14649 208 aa13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 CXCL9Q07325 125 aa13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 SLC10A5Q5PT55 438 aa13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 RTFDC1Q9BY42 306 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 PGAP2Q9UHJ9 254 aa13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 NUP98P52948 1817 aa13.24□□□□□ -0.29
CALCOCO2-227ENST00000575560 PPIP5K2O43314 1243 aa13.23□□□□□ -0.29
CALCOCO2-227ENST00000575560 AOC2O75106 756 aa13.23□□□□□ -0.29
CALCOCO2-227ENST00000575560 AOC3Q16853 763 aa13.23□□□□□ -0.29
CALCOCO2-227ENST00000575560 PAXIP1Q6ZW49 1069 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO2-227ENST00000575560 SAPCD2Q86UD0 394 aa13.23□□□□□ -0.29
CALCOCO2-227ENST00000575560 HHIPL1Q96JK4 782 aa13.23□□□□□ -0.29
CALCOCO2-227ENST00000575560 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
CALCOCO2-227ENST00000575560 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
CALCOCO2-227ENST00000575560 CCDC85CA6NKD9 419 aa13.22□□□□□ -0.29
CALCOCO2-227ENST00000575560 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
CALCOCO2-227ENST00000575560 GRM1Q13255 1194 aa13.22□□□□□ -0.29
CALCOCO2-227ENST00000575560 PARP10Q53GL7 1025 aa13.22□□□□□ -0.29
CALCOCO2-227ENST00000575560 LRP10Q7Z4F1 713 aa13.22□□□□□ -0.29
CALCOCO2-227ENST00000575560 PPP1R42Q7Z4L9 355 aa13.22□□□□□ -0.29
CALCOCO2-227ENST00000575560 PLEKHF1Q96S99 279 aa13.22□□□□□ -0.29
CALCOCO2-227ENST00000575560 LAMB4A4D0S4 1761 aa13.22□□□□□ -0.29
CALCOCO2-227ENST00000575560 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
CALCOCO2-227ENST00000575560 CELF2O95319 508 aaKnown RBP13.21□□□□□ -0.29
CALCOCO2-227ENST00000575560 MLLT1Q03111 559 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO2-227ENST00000575560 ZC3H15Q8WU90 426 aaKnown RBP13.21□□□□□ -0.29
CALCOCO2-227ENST00000575560 TMX4Q9H1E5 349 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO2-227ENST00000575560 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
CALCOCO2-227ENST00000575560 TRPM7Q96QT4 1865 aa13.21□□□□□ -0.3
CALCOCO2-227ENST00000575560 CA12O43570 354 aa13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 BBOX1O75936 387 aa13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 GMPSP49915 693 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 HIRAP54198 1017 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 PDIA6Q15084 440 aa13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 SP8Q8IXZ3 490 aa13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 SUPT20HQ8NEM7 779 aa13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 THUMPD2Q9BTF0 503 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms