RNA–Protein interactions for RNA: ENST00000574494.1

TRAP1-210, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-210ENST00000574494 CDHR2Q9BYE9 1310 aa17.31■□□□□ 0.36
TRAP1-210ENST00000574494 APBB1O00213 710 aa17.31■□□□□ 0.36
TRAP1-210ENST00000574494 PCCAP05165 728 aaPredicted RBP17.31■□□□□ 0.36
TRAP1-210ENST00000574494 AOX1Q06278 1338 aa17.3■□□□□ 0.36
TRAP1-210ENST00000574494 CASP7P55210 303 aa17.3■□□□□ 0.36
TRAP1-210ENST00000574494 C8orf34Q49A92 452 aa17.3■□□□□ 0.36
TRAP1-210ENST00000574494 PARP10Q53GL7 1025 aa17.3■□□□□ 0.36
TRAP1-210ENST00000574494 ZBTB38Q8NAP3 1195 aaPredicted RBP17.3■□□□□ 0.36
TRAP1-210ENST00000574494 LINC00116Q8NCU8 138 aa17.3■□□□□ 0.36
TRAP1-210ENST00000574494 UPF2Q9HAU5 1272 aaKnown RBP17.3■□□□□ 0.36
TRAP1-210ENST00000574494 AK9Q5TCS8 1911 aa17.29■□□□□ 0.36
TRAP1-210ENST00000574494 TUBGCP6Q96RT7 1819 aa17.29■□□□□ 0.36
TRAP1-210ENST00000574494 RXRBP28702 533 aa17.29■□□□□ 0.36
TRAP1-210ENST00000574494 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRAP1-210ENST00000574494 C4AP0C0L4 1744 aa17.29■□□□□ 0.36
TRAP1-210ENST00000574494 SLC27A3Q5K4L6 730 aa17.28■□□□□ 0.36
TRAP1-210ENST00000574494 FAM182BQ5T319 152 aa17.28■□□□□ 0.36
TRAP1-210ENST00000574494 PLEKHM2Q8IWE5 1019 aa17.28■□□□□ 0.36
TRAP1-210ENST00000574494 RHPN1Q8TCX5 695 aa17.28■□□□□ 0.36
TRAP1-210ENST00000574494 GPATCH3Q96I76 525 aa17.28■□□□□ 0.36
TRAP1-210ENST00000574494 KAZALD1Q96I82 304 aa17.28■□□□□ 0.36
TRAP1-210ENST00000574494 TBC1D2BQ9UPU7 963 aa17.28■□□□□ 0.36
TRAP1-210ENST00000574494 ANP32AP39687 249 aaKnown RBP17.27■□□□□ 0.36
TRAP1-210ENST00000574494 CLEC4GQ6UXB4 293 aa17.27■□□□□ 0.36
TRAP1-210ENST00000574494 NLRP10Q86W26 655 aa17.27■□□□□ 0.36
TRAP1-210ENST00000574494 CLASRPQ8N2M8 674 aaKnown RBP17.27■□□□□ 0.36
TRAP1-210ENST00000574494 AK7Q96M32 723 aa17.27■□□□□ 0.36
TRAP1-210ENST00000574494 PLA2G12BQ9BX93 195 aa17.27■□□□□ 0.36
TRAP1-210ENST00000574494 OSBPL3Q9H4L5 887 aa17.27■□□□□ 0.36
TRAP1-210ENST00000574494 COL24A1Q17RW2 1714 aa17.27■□□□□ 0.35
TRAP1-210ENST00000574494 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
TRAP1-210ENST00000574494 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
TRAP1-210ENST00000574494 CAMTA2O94983 1202 aa17.26■□□□□ 0.35
TRAP1-210ENST00000574494 MX1P20591 662 aa17.26■□□□□ 0.35
TRAP1-210ENST00000574494 TTC22Q5TAA0 569 aa17.26■□□□□ 0.35
TRAP1-210ENST00000574494 COPRSQ9NQ92 184 aa17.26■□□□□ 0.35
TRAP1-210ENST00000574494 CHMP3Q9Y3E7 222 aa17.26■□□□□ 0.35
TRAP1-210ENST00000574494 RTCBQ9Y3I0 505 aaKnown RBP17.26■□□□□ 0.35
TRAP1-210ENST00000574494 UBR3Q6ZT12 1888 aa17.26■□□□□ 0.35
TRAP1-210ENST00000574494 ADRA2BP18089 450 aa17.25■□□□□ 0.35
TRAP1-210ENST00000574494 GPTP24298 496 aa17.25■□□□□ 0.35
TRAP1-210ENST00000574494 HLFQ16534 295 aa17.25■□□□□ 0.35
TRAP1-210ENST00000574494 CASC1Q6TDU7 716 aa17.25■□□□□ 0.35
TRAP1-210ENST00000574494 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
TRAP1-210ENST00000574494 ZNF34Q8IZ26 560 aa17.25■□□□□ 0.35
TRAP1-210ENST00000574494 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
TRAP1-210ENST00000574494 GNPATO15228 680 aa17.24■□□□□ 0.35
TRAP1-210ENST00000574494 TRMT112Q9UI30 125 aaKnown RBP17.24■□□□□ 0.35
TRAP1-210ENST00000574494 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
TRAP1-210ENST00000574494 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
TRAP1-210ENST00000574494 SH3TC1Q8TE82 1336 aa17.23■□□□□ 0.35
TRAP1-210ENST00000574494 CDC45O75419 566 aa17.23■□□□□ 0.35
TRAP1-210ENST00000574494 PDE1AP54750 535 aa17.23■□□□□ 0.35
TRAP1-210ENST00000574494 FOXO4P98177 505 aa17.23■□□□□ 0.35
TRAP1-210ENST00000574494 EPHA10Q5JZY3 1008 aa17.23■□□□□ 0.35
TRAP1-210ENST00000574494 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
TRAP1-210ENST00000574494 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
TRAP1-210ENST00000574494 STAP2Q9UGK3 403 aa17.23■□□□□ 0.35
TRAP1-210ENST00000574494 TTC41PQ6P2S7 1318 aa17.22■□□□□ 0.35
TRAP1-210ENST00000574494 SALL3Q9BXA9 1300 aa17.22■□□□□ 0.35
TRAP1-210ENST00000574494 ERC2O15083 957 aa17.22■□□□□ 0.35
TRAP1-210ENST00000574494 ZPR1O75312 459 aa17.22■□□□□ 0.35
TRAP1-210ENST00000574494 IFIT2P09913 472 aaKnown RBP17.22■□□□□ 0.35
TRAP1-210ENST00000574494 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
TRAP1-210ENST00000574494 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
TRAP1-210ENST00000574494 NARFQ9UHQ1 456 aa17.22■□□□□ 0.35
TRAP1-210ENST00000574494 PDE8AO60658 829 aa17.21■□□□□ 0.35
TRAP1-210ENST00000574494 TRIM37O94972 964 aa17.21■□□□□ 0.35
TRAP1-210ENST00000574494 TAF7LQ5H9L4 462 aa17.21■□□□□ 0.35
TRAP1-210ENST00000574494 JARID2Q92833 1246 aaPredicted RBP17.21■□□□□ 0.35
TRAP1-210ENST00000574494 FAM89AQ96GI7 184 aa17.21■□□□□ 0.35
TRAP1-210ENST00000574494 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
TRAP1-210ENST00000574494 PA2G4Q9UQ80 394 aaKnown RBP17.21■□□□□ 0.35
TRAP1-210ENST00000574494 NIP7Q9Y221 180 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAP1-210ENST00000574494 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.34
TRAP1-210ENST00000574494 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.34
TRAP1-210ENST00000574494 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
TRAP1-210ENST00000574494 IRS4O14654 1257 aaPredicted RBP17.2■□□□□ 0.34
TRAP1-210ENST00000574494 CIAO1O76071 339 aa17.2■□□□□ 0.34
TRAP1-210ENST00000574494 RFX5P48382 616 aaPredicted RBP17.2■□□□□ 0.34
TRAP1-210ENST00000574494 CTSWP56202 376 aa17.2■□□□□ 0.34
TRAP1-210ENST00000574494 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
TRAP1-210ENST00000574494 RTL5Q5HYW3 569 aaPredicted RBP17.2■□□□□ 0.34
TRAP1-210ENST00000574494 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
TRAP1-210ENST00000574494 SIL1Q9H173 461 aa17.2■□□□□ 0.34
TRAP1-210ENST00000574494 LRP5O75197 1615 aa17.2■□□□□ 0.34
TRAP1-210ENST00000574494 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
TRAP1-210ENST00000574494 IFIT5Q13325 482 aaKnown RBP17.19■□□□□ 0.34
TRAP1-210ENST00000574494 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
TRAP1-210ENST00000574494 GLRX3O76003 335 aaKnown RBP17.18■□□□□ 0.34
TRAP1-210ENST00000574494 GSPT1P15170 499 aaKnown RBP17.18■□□□□ 0.34
TRAP1-210ENST00000574494 RFC4P35249 363 aa17.18■□□□□ 0.34
TRAP1-210ENST00000574494 AACSQ86V21 672 aa17.18■□□□□ 0.34
TRAP1-210ENST00000574494 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
TRAP1-210ENST00000574494 ANKRD18BA2A2Z9 1011 aa17.17■□□□□ 0.34
TRAP1-210ENST00000574494 PLSCR1O15162 318 aa17.17■□□□□ 0.34
TRAP1-210ENST00000574494 CSF1RP07333 972 aa17.17■□□□□ 0.34
TRAP1-210ENST00000574494 SSFA2P28290 1259 aa17.17■□□□□ 0.34
TRAP1-210ENST00000574494 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
TRAP1-210ENST00000574494 GPR108Q9NPR9 543 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms