RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ZFYVE16Q7Z3T8 1539 aa10.02□□□□□ -0.8
CNOT1-222ENST00000570139 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.8
CNOT1-222ENST00000570139 FZD6O60353 706 aa10.02□□□□□ -0.81
CNOT1-222ENST00000570139 WNT7BP56706 349 aa10.02□□□□□ -0.81
CNOT1-222ENST00000570139 PIK3R5Q8WYR1 880 aa10.02□□□□□ -0.81
CNOT1-222ENST00000570139 DUSP9Q99956 384 aaKnown RBP10.02□□□□□ -0.81
CNOT1-222ENST00000570139 C2orf49Q9BVC5 232 aaPredicted RBP10.02□□□□□ -0.81
CNOT1-222ENST00000570139 KDM5CP41229 1560 aa10.01□□□□□ -0.81
CNOT1-222ENST00000570139 GNRH1P01148 92 aa10.01□□□□□ -0.81
CNOT1-222ENST00000570139 PSMA6P60900 246 aaKnown RBP10.01□□□□□ -0.81
CNOT1-222ENST00000570139 PSMD2Q13200 908 aa10.01□□□□□ -0.81
CNOT1-222ENST00000570139 ETNK1Q9HBU6 452 aa10.01□□□□□ -0.81
CNOT1-222ENST00000570139 CYLDQ9NQC7 956 aa10.01□□□□□ -0.81
CNOT1-222ENST00000570139 SCHIP1Q9P0W5 487 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-222ENST00000570139 VTI1BQ9UEU0 232 aa10.01□□□□□ -0.81
CNOT1-222ENST00000570139 KDM5DQ9BY66 1539 aa10.01□□□□□ -0.81
CNOT1-222ENST00000570139 ARHGEF12Q9NZN5 1544 aa10.01□□□□□ -0.81
CNOT1-222ENST00000570139 KIF15Q9NS87 1388 aa10.01□□□□□ -0.81
CNOT1-222ENST00000570139 EIF2AK4Q9P2K8 1649 aaKnown RBP10□□□□□ -0.81
CNOT1-222ENST00000570139 ERBINQ96RT1 1412 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 A0A1W2PRU2 124 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 USP5P45974 858 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 DAB2P98082 770 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 FOXK2Q01167 660 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 TRIM32Q13049 653 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 COX20Q5RI15 118 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 SLC9A9Q8IVB4 645 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 KCTD12Q96CX2 325 aaKnown RBP10□□□□□ -0.81
CNOT1-222ENST00000570139 MYO19Q96H55 970 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 CCDC87Q9NVE4 849 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 ATP7AQ04656 1500 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 KIF13AQ9H1H9 1805 aa10□□□□□ -0.81
CNOT1-222ENST00000570139 POGZQ7Z3K3 1410 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 ANKRD50Q9ULJ7 1429 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 A6NJY4 79 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 HNRNPMP52272 730 aaKnown RBP eCLIP9.99□□□□□ -0.81
CNOT1-222ENST00000570139 ALG1LQ6GMV1 187 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 NT5DC4Q86YG4 428 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 RNF34Q969K3 372 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 SPATA32Q96LK8 384 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 UNC13BO14795 1591 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 HECW2Q9P2P5 1572 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 SCAPERQ9BY12 1400 aa9.99□□□□□ -0.81
CNOT1-222ENST00000570139 KDM6BO15054 1643 aa9.98□□□□□ -0.81
CNOT1-222ENST00000570139 TNFRSF10BO14763 440 aa9.98□□□□□ -0.81
CNOT1-222ENST00000570139 IGHA2P01877 340 aa9.98□□□□□ -0.81
CNOT1-222ENST00000570139 FSHRP23945 695 aa9.98□□□□□ -0.81
CNOT1-222ENST00000570139 BRD2P25440 801 aaKnown RBP9.98□□□□□ -0.81
CNOT1-222ENST00000570139 MTFR1Q15390 333 aa9.98□□□□□ -0.81
CNOT1-222ENST00000570139 C9orf131Q5VYM1 1079 aa9.98□□□□□ -0.81
CNOT1-222ENST00000570139 TGIF2Q9GZN2 237 aa9.98□□□□□ -0.81
CNOT1-222ENST00000570139 CCSER2Q9H7U1 834 aa9.98□□□□□ -0.81
CNOT1-222ENST00000570139 PPRC1Q5VV67 1664 aaKnown RBP9.97□□□□□ -0.81
CNOT1-222ENST00000570139 RICTORQ6R327 1708 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 GPR182O15218 404 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 SMTNP53814 917 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 MYT1Q01538 1121 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 RAD51AP2Q09MP3 1159 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 LDLRAD1Q5T700 205 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 NBPF15Q8N660 670 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 ZNF784Q8NCA9 323 aaPredicted RBP9.97□□□□□ -0.81
CNOT1-222ENST00000570139 FAM161BQ96MY7 647 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 CDK15Q96Q40 435 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 RRP7BPQ9NSQ0 103 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 TRAPPC8Q9Y2L5 1435 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 DENND4BO75064 1496 aaPredicted RBP9.97□□□□□ -0.81
CNOT1-222ENST00000570139 MLH3Q9UHC1 1453 aa9.97□□□□□ -0.81
CNOT1-222ENST00000570139 BCORL1Q5H9F3 1711 aa9.96□□□□□ -0.81
CNOT1-222ENST00000570139 STAU1O95793 577 aaKnown RBP9.96□□□□□ -0.82
CNOT1-222ENST00000570139 ZNF76P36508 570 aa9.96□□□□□ -0.82
CNOT1-222ENST00000570139 ENOX2Q16206 610 aaKnown RBP9.96□□□□□ -0.82
CNOT1-222ENST00000570139 METTL16Q86W50 562 aaKnown RBP9.96□□□□□ -0.82
CNOT1-222ENST00000570139 EHBP1Q8NDI1 1231 aa9.96□□□□□ -0.82
CNOT1-222ENST00000570139 TANGO6Q9C0B7 1094 aa9.96□□□□□ -0.82
CNOT1-222ENST00000570139 QTRT2Q9H974 415 aaKnown RBP9.96□□□□□ -0.82
CNOT1-222ENST00000570139 TMPRSS4Q9NRS4 437 aa9.96□□□□□ -0.82
CNOT1-222ENST00000570139 SPAG9O60271 1321 aaKnown RBP9.96□□□□□ -0.82
CNOT1-222ENST00000570139 MAGI2Q86UL8 1455 aa9.96□□□□□ -0.82
CNOT1-222ENST00000570139 ZMYM4Q5VZL5 1548 aa9.96□□□□□ -0.82
CNOT1-222ENST00000570139 SMARCA5O60264 1052 aaPredicted RBP9.95□□□□□ -0.82
CNOT1-222ENST00000570139 FANCCQ00597 558 aa9.95□□□□□ -0.82
CNOT1-222ENST00000570139 GNL2Q13823 731 aaKnown RBP9.95□□□□□ -0.82
CNOT1-222ENST00000570139 FBF1Q8TES7 1133 aa9.95□□□□□ -0.82
CNOT1-222ENST00000570139 DEPDC5O75140 1603 aa9.95□□□□□ -0.82
CNOT1-222ENST00000570139 IQGAP3Q86VI3 1631 aa9.95□□□□□ -0.82
CNOT1-222ENST00000570139 KIDINS220Q9ULH0 1771 aa9.95□□□□□ -0.82
CNOT1-222ENST00000570139 MZF1P28698 734 aaPredicted RBP9.94□□□□□ -0.82
CNOT1-222ENST00000570139 CCDC116Q8IYX3 515 aa9.94□□□□□ -0.82
CNOT1-222ENST00000570139 GJD3Q8N144 294 aa9.94□□□□□ -0.82
CNOT1-222ENST00000570139 SLC43A3Q8NBI5 491 aa9.94□□□□□ -0.82
CNOT1-222ENST00000570139 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
CNOT1-222ENST00000570139 FRMD6Q96NE9 622 aa9.94□□□□□ -0.82
CNOT1-222ENST00000570139 NLRP2Q9NX02 1062 aa9.94□□□□□ -0.82
CNOT1-222ENST00000570139 PNMA6FA0A0J9YX94 578 aa9.93□□□□□ -0.82
CNOT1-222ENST00000570139 CDK2AP1O14519 115 aa9.93□□□□□ -0.82
CNOT1-222ENST00000570139 GNA15P30679 374 aa9.93□□□□□ -0.82
CNOT1-222ENST00000570139 TBCELQ5QJ74 424 aa9.93□□□□□ -0.82
CNOT1-222ENST00000570139 POTEAQ6S8J7 498 aa9.93□□□□□ -0.82
CNOT1-222ENST00000570139 MPNDQ8N594 471 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms