RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 ZNF397Q8NF99 534 aaPredicted RBP23.37■■□□□ 1.33
AC009041.2-204ENST00000568394 NOL10Q9BSC4 688 aaKnown RBP23.37■■□□□ 1.33
AC009041.2-204ENST00000568394 FUCA2Q9BTY2 467 aa23.37■■□□□ 1.33
AC009041.2-204ENST00000568394 NLRP2Q9NX02 1062 aa23.37■■□□□ 1.33
AC009041.2-204ENST00000568394 ZRSR1Q15695 479 aaKnown RBP23.37■■□□□ 1.33
AC009041.2-204ENST00000568394 SETBP1Q9Y6X0 1596 aa23.37■■□□□ 1.33
AC009041.2-204ENST00000568394 FLIIQ13045 1269 aa23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 IL17REQ8NFR9 667 aa23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 EDC4Q6P2E9 1401 aaKnown RBP23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 NR1I2O75469 434 aa23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 ME3Q16798 604 aa23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 NBPF6Q5VWK0 638 aa23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 NBPF4Q96M43 638 aa23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 PPP1R42Q7Z4L9 355 aa23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 TMX1Q9H3N1 280 aa23.36■■□□□ 1.33
AC009041.2-204ENST00000568394 RIMBP3CA6NJZ7 1639 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 RIMBP3BA6NNM3 1639 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 MYO3AQ8NEV4 1616 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 RIMBP3Q9UFD9 1639 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 PTH1RQ03431 593 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 TMEM87AQ8NBN3 555 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 TMEM131LA2VDJ0 1609 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 HSPA2P54652 639 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 ERCC6LQ2NKX8 1250 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 PHF8Q9UPP1 1060 aa23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 PUS7Q96PZ0 661 aaKnown RBP23.35■■□□□ 1.33
AC009041.2-204ENST00000568394 RAD50Q92878 1312 aa23.34■■□□□ 1.33
AC009041.2-204ENST00000568394 SGSM2O43147 1006 aa23.34■■□□□ 1.33
AC009041.2-204ENST00000568394 ATP8B2P98198 1209 aa23.34■■□□□ 1.33
AC009041.2-204ENST00000568394 CCDC69A6NI79 296 aa23.34■■□□□ 1.33
AC009041.2-204ENST00000568394 GNL2Q13823 731 aaKnown RBP23.34■■□□□ 1.33
AC009041.2-204ENST00000568394 CHL1O00533 1208 aa23.33■■□□□ 1.33
AC009041.2-204ENST00000568394 PREX1Q8TCU6 1659 aa23.33■■□□□ 1.33
AC009041.2-204ENST00000568394 CCAR2Q8N163 923 aaKnown RBP23.33■■□□□ 1.33
AC009041.2-204ENST00000568394 GNAT3A8MTJ3 354 aa23.33■■□□□ 1.32
AC009041.2-204ENST00000568394 SMC2O95347 1197 aa23.33■■□□□ 1.32
AC009041.2-204ENST00000568394 HOXC9P31274 260 aa23.33■■□□□ 1.32
AC009041.2-204ENST00000568394 CHPF2Q9P2E5 772 aa23.33■■□□□ 1.32
AC009041.2-204ENST00000568394 TAF7Q15545 349 aaPredicted RBP23.32■■□□□ 1.32
AC009041.2-204ENST00000568394 COL3A1P02461 1466 aaPredicted RBP23.32■■□□□ 1.32
AC009041.2-204ENST00000568394 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
AC009041.2-204ENST00000568394 RHPN1Q8TCX5 695 aa23.32■■□□□ 1.32
AC009041.2-204ENST00000568394 HYPKQ9NX55 129 aa23.32■■□□□ 1.32
AC009041.2-204ENST00000568394 CALCOCO1Q9P1Z2 691 aa23.31■■□□□ 1.32
AC009041.2-204ENST00000568394 HTATSF1O43719 755 aaKnown RBP23.31■■□□□ 1.32
AC009041.2-204ENST00000568394 IFT172Q9UG01 1749 aa23.31■■□□□ 1.32
AC009041.2-204ENST00000568394 PA2G4Q9UQ80 394 aaKnown RBP23.31■■□□□ 1.32
AC009041.2-204ENST00000568394 PNPLA6Q8IY17 1366 aa23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 KIAA1210Q9ULL0 1709 aa23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 SYT10Q6XYQ8 523 aa23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 NEK11Q8NG66 645 aa23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 MAP2P11137 1827 aaKnown RBP23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 PI4KAP2A4QPH2 592 aa23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 PROSER2Q86WR7 435 aaPredicted RBP23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 PI4KAP1Q8N8J0 262 aa23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 KLHDC4Q8TBB5 520 aa23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 TPCN1Q9ULQ1 816 aa23.3■■□□□ 1.32
AC009041.2-204ENST00000568394 RUFY2Q8WXA3 655 aa23.29■■□□□ 1.32
AC009041.2-204ENST00000568394 MORC2Q9Y6X9 1032 aaPredicted RBP23.29■■□□□ 1.32
AC009041.2-204ENST00000568394 SLU7O95391 586 aaKnown RBP23.29■■□□□ 1.32
AC009041.2-204ENST00000568394 CWF19L2Q2TBE0 894 aaKnown RBP23.29■■□□□ 1.32
AC009041.2-204ENST00000568394 LSG1Q9H089 658 aaKnown RBP23.29■■□□□ 1.32
AC009041.2-204ENST00000568394 IFIT2P09913 472 aaKnown RBP23.28■■□□□ 1.32
AC009041.2-204ENST00000568394 GUCY1B3Q02153 619 aa23.28■■□□□ 1.32
AC009041.2-204ENST00000568394 LRRC8AQ8IWT6 810 aa23.28■■□□□ 1.32
AC009041.2-204ENST00000568394 RICTORQ6R327 1708 aa23.28■■□□□ 1.32
AC009041.2-204ENST00000568394 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
AC009041.2-204ENST00000568394 TTC14Q96N46 770 aa23.28■■□□□ 1.32
AC009041.2-204ENST00000568394 LRRC2Q9BYS8 371 aa23.28■■□□□ 1.32
AC009041.2-204ENST00000568394 NDUFB9Q9Y6M9 179 aa23.28■■□□□ 1.32
AC009041.2-204ENST00000568394 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
AC009041.2-204ENST00000568394 NBPF7P0C2Y1 421 aaPredicted RBP23.27■■□□□ 1.32
AC009041.2-204ENST00000568394 ARHGAP29Q52LW3 1261 aa23.27■■□□□ 1.32
AC009041.2-204ENST00000568394 ISM2Q6H9L7 571 aa23.27■■□□□ 1.32
AC009041.2-204ENST00000568394 PTPRUQ92729 1446 aa23.27■■□□□ 1.32
AC009041.2-204ENST00000568394 SNW1Q13573 536 aaKnown RBP23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 MNS1Q8NEH6 495 aa23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 SCAND2PQ9GZW5 306 aaPredicted RBP23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 COL9A3Q14050 684 aaPredicted RBP23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 PROSER3Q2NL68 480 aa23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 LEO1Q8WVC0 666 aaPredicted RBP23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 DDX19AQ9NUU7 478 aaKnown RBP23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 BIN1O00499 593 aa23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 CCDC30Q5VVM6 783 aa23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 BLOC1S2Q6QNY1 142 aa23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 C11orf57Q6ZUT1 292 aaPredicted RBP23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 ZSCAN31Q96LW9 406 aaPredicted RBP23.26■■□□□ 1.31
AC009041.2-204ENST00000568394 JAK2O60674 1132 aa23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 HNRNPH2P55795 449 aaKnown RBP23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 SDF4Q9BRK5 362 aa23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 RBM8AQ9Y5S9 174 aaKnown RBP23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 KIF24Q5T7B8 1368 aa23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 PDCP20941 246 aa23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 FTOQ9C0B1 505 aaKnown RBP eCLIP23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 SKIDA1Q1XH10 827 aa23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 AOPEPQ8N6M6 819 aa23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 SH2B1Q9NRF2 756 aaPredicted RBP23.25■■□□□ 1.31
AC009041.2-204ENST00000568394 RBM6P78332 1123 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms