RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 ERFEQ4G0M1 354 aa11.06□□□□□ -0.64
KLHDC4-220ENST00000568338 MBIPQ9NS73 344 aa11.06□□□□□ -0.64
KLHDC4-220ENST00000568338 BABAM1Q9NWV8 329 aa11.06□□□□□ -0.64
KLHDC4-220ENST00000568338 WBP1LQ9NX94 342 aa11.06□□□□□ -0.64
KLHDC4-220ENST00000568338 SBF1O95248 1867 aa11.06□□□□□ -0.64
KLHDC4-220ENST00000568338 ERVV-2B6SEH9 535 aa11.05□□□□□ -0.64
KLHDC4-220ENST00000568338 NFKBIEO00221 500 aa11.05□□□□□ -0.64
KLHDC4-220ENST00000568338 CHL1O00533 1208 aa11.05□□□□□ -0.64
KLHDC4-220ENST00000568338 ZPR1O75312 459 aa11.05□□□□□ -0.64
KLHDC4-220ENST00000568338 SLC39A7Q92504 469 aa11.05□□□□□ -0.64
KLHDC4-220ENST00000568338 LGR6Q9HBX8 967 aa11.05□□□□□ -0.64
KLHDC4-220ENST00000568338 TSPYL4Q9UJ04 414 aa11.05□□□□□ -0.64
KLHDC4-220ENST00000568338 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
KLHDC4-220ENST00000568338 TMEM88BA6NKF7 163 aa11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 HSPA8P11142 646 aaKnown RBP11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 TM4SF1P30408 202 aa11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 CABP4P57796 275 aa11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 EXOSC9Q06265 439 aaKnown RBP11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 TAF7Q15545 349 aaPredicted RBP11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 C2CD5Q86YS7 1000 aa11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 SUPT16HQ9Y5B9 1047 aaKnown RBP11.04□□□□□ -0.64
KLHDC4-220ENST00000568338 IQCA1LA6NCM1 817 aa11.03□□□□□ -0.64
KLHDC4-220ENST00000568338 H0YIN7 160 aa11.03□□□□□ -0.64
KLHDC4-220ENST00000568338 MAP2K1Q02750 393 aaPredicted RBP11.03□□□□□ -0.64
KLHDC4-220ENST00000568338 LDHDQ86WU2 507 aa11.03□□□□□ -0.64
KLHDC4-220ENST00000568338 TMEM106CQ9BVX2 250 aa11.03□□□□□ -0.64
KLHDC4-220ENST00000568338 SLC52A2Q9HAB3 445 aa11.03□□□□□ -0.64
KLHDC4-220ENST00000568338 NEFLP07196 543 aa11.02□□□□□ -0.65
KLHDC4-220ENST00000568338 C7P10643 843 aa11.02□□□□□ -0.65
KLHDC4-220ENST00000568338 USPL1Q5W0Q7 1092 aa11.02□□□□□ -0.65
KLHDC4-220ENST00000568338 ZNF428Q96B54 188 aa11.02□□□□□ -0.65
KLHDC4-220ENST00000568338 RNF123Q5XPI4 1314 aa11.02□□□□□ -0.65
KLHDC4-220ENST00000568338 PASKQ96RG2 1323 aa11.02□□□□□ -0.65
KLHDC4-220ENST00000568338 BTBD11A6QL63 1104 aa11.01□□□□□ -0.65
KLHDC4-220ENST00000568338 DDNO94850 711 aaPredicted RBP11.01□□□□□ -0.65
KLHDC4-220ENST00000568338 RGS19P49795 217 aa11.01□□□□□ -0.65
KLHDC4-220ENST00000568338 TWISTNBQ3B726 338 aaPredicted RBP11.01□□□□□ -0.65
KLHDC4-220ENST00000568338 BEGAINQ9BUH8 593 aa11.01□□□□□ -0.65
KLHDC4-220ENST00000568338 SOS1Q07889 1333 aaPredicted RBP11.01□□□□□ -0.65
KLHDC4-220ENST00000568338 DLEC1Q9Y238 1755 aa11□□□□□ -0.65
KLHDC4-220ENST00000568338 RASSF10A6NK89 507 aa11□□□□□ -0.65
KLHDC4-220ENST00000568338 SERPINB2P05120 415 aa11□□□□□ -0.65
KLHDC4-220ENST00000568338 RARSP54136 660 aaKnown RBP11□□□□□ -0.65
KLHDC4-220ENST00000568338 RRP1P56182 461 aaKnown RBP11□□□□□ -0.65
KLHDC4-220ENST00000568338 NFIXQ14938 502 aa11□□□□□ -0.65
KLHDC4-220ENST00000568338 DEFB115Q30KQ5 88 aa11□□□□□ -0.65
KLHDC4-220ENST00000568338 MIS18AQ9NYP9 233 aa11□□□□□ -0.65
KLHDC4-220ENST00000568338 UBR2Q8IWV8 1755 aa10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 C21orf2O43822 256 aa10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 ALDH1L2Q3SY69 923 aa10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 INTS5Q6P9B9 1019 aaKnown RBP10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 ZNF622Q969S3 477 aaKnown RBP eCLIP10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 TAOK3Q9H2K8 898 aa10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 ABT1Q9ULW3 272 aaKnown RBP10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 WDR33Q9C0J8 1336 aaKnown RBP10.99□□□□□ -0.65
KLHDC4-220ENST00000568338 VAMP4O75379 141 aa10.98□□□□□ -0.65
KLHDC4-220ENST00000568338 TSPYL6Q8N831 410 aa10.98□□□□□ -0.65
KLHDC4-220ENST00000568338 C8orf58Q8NAV2 365 aa10.98□□□□□ -0.65
KLHDC4-220ENST00000568338 NFATC2IPQ8NCF5 419 aa10.98□□□□□ -0.65
KLHDC4-220ENST00000568338 TAF1DQ9H5J8 278 aaPredicted RBP10.98□□□□□ -0.65
KLHDC4-220ENST00000568338 SMC4Q9NTJ3 1288 aa10.98□□□□□ -0.65
KLHDC4-220ENST00000568338 LTBP3Q9NS15 1303 aa10.98□□□□□ -0.65
KLHDC4-220ENST00000568338 TJP1Q07157 1748 aa10.98□□□□□ -0.65
KLHDC4-220ENST00000568338 POTEFA5A3E0 1075 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 ELL2O00472 640 aaPredicted RBP10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 EIF4A1P60842 406 aaKnown RBP10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 KRT24Q2M2I5 525 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 ZNF790Q6PG37 636 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 PAXIP1Q6ZW49 1069 aaPredicted RBP10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 TTC5Q8N0Z6 440 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 L3MBTL3Q96JM7 780 aaPredicted RBP10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 CHMP4AQ9BY43 222 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 NARFQ9UHQ1 456 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 PDZRN3Q9UPQ7 1066 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 KIF16BQ96L93 1317 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 COL15A1P39059 1388 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 CARMIL3Q8ND23 1372 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 NRXN2Q9P2S2 1712 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 LAMB4A4D0S4 1761 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 CACNA1FO60840 1977 aa10.97□□□□□ -0.65
KLHDC4-220ENST00000568338 BCAR3O75815 825 aa10.96□□□□□ -0.65
KLHDC4-220ENST00000568338 HOXB7P09629 217 aa10.96□□□□□ -0.65
KLHDC4-220ENST00000568338 CANXP27824 592 aaKnown RBP10.96□□□□□ -0.65
KLHDC4-220ENST00000568338 PDE6BP35913 854 aa10.96□□□□□ -0.65
KLHDC4-220ENST00000568338 SOGA3Q5TF21 947 aa10.96□□□□□ -0.65
KLHDC4-220ENST00000568338 SSH1Q8WYL5 1049 aa10.96□□□□□ -0.65
KLHDC4-220ENST00000568338 BCL2L13Q9BXK5 485 aa10.96□□□□□ -0.65
KLHDC4-220ENST00000568338 HEG1Q9ULI3 1381 aa10.95□□□□□ -0.66
KLHDC4-220ENST00000568338 ECE1P42892 770 aa10.95□□□□□ -0.66
KLHDC4-220ENST00000568338 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
KLHDC4-220ENST00000568338 GRM1Q13255 1194 aa10.95□□□□□ -0.66
KLHDC4-220ENST00000568338 IER5LQ5T953 404 aa10.95□□□□□ -0.66
KLHDC4-220ENST00000568338 BICDL1Q6ZP65 573 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms