RNA–Protein interactions for RNA: ENST00000568097.1

HERC2P4-206, Transcript of hect domain and RLD 2 pseudogene 4, humanhuman

TSL 5 BASIC

Gene HERC2P4, Length 1,062 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P4-206ENST00000568097 HOXA10P31260 410 aaPredicted RBP28.4■■■□□ 2.14
HERC2P4-206ENST00000568097 CCDC93Q567U6 631 aa28.4■■■□□ 2.14
HERC2P4-206ENST00000568097 NLRP10Q86W26 655 aa28.39■■■□□ 2.14
HERC2P4-206ENST00000568097 SYNE4Q8N205 404 aa28.39■■■□□ 2.14
HERC2P4-206ENST00000568097 RBM46Q8TBY0 533 aaKnown RBP28.39■■■□□ 2.14
HERC2P4-206ENST00000568097 UTP14AQ9BVJ6 771 aaKnown RBP28.38■■■□□ 2.13
HERC2P4-206ENST00000568097 CCDC88AQ3V6T2 1871 aa28.38■■■□□ 2.13
HERC2P4-206ENST00000568097 ALDH1B1P30837 517 aa28.37■■■□□ 2.13
HERC2P4-206ENST00000568097 TCIRG1Q13488 830 aa28.37■■■□□ 2.13
HERC2P4-206ENST00000568097 PPP1R42Q7Z4L9 355 aa28.37■■■□□ 2.13
HERC2P4-206ENST00000568097 FKBP4Q02790 459 aaKnown RBP eCLIP28.36■■■□□ 2.13
HERC2P4-206ENST00000568097 SLC10A5Q5PT55 438 aa28.36■■■□□ 2.13
HERC2P4-206ENST00000568097 ZNF277Q9NRM2 450 aaPredicted RBP28.36■■■□□ 2.13
HERC2P4-206ENST00000568097 GNAI1P63096 354 aa28.35■■■□□ 2.13
HERC2P4-206ENST00000568097 C8orf58Q8NAV2 365 aa28.35■■■□□ 2.13
HERC2P4-206ENST00000568097 ZNF428Q96B54 188 aa28.35■■■□□ 2.13
HERC2P4-206ENST00000568097 DBF4Q9UBU7 674 aaPredicted RBP28.35■■■□□ 2.13
HERC2P4-206ENST00000568097 ELL2O00472 640 aaPredicted RBP28.34■■■□□ 2.13
HERC2P4-206ENST00000568097 HSP90AB3PQ58FF7 597 aa28.33■■■□□ 2.13
HERC2P4-206ENST00000568097 C16orf71Q8IYS4 520 aaPredicted RBP28.33■■■□□ 2.13
HERC2P4-206ENST00000568097 PLBD2Q8NHP8 589 aa28.33■■■□□ 2.13
HERC2P4-206ENST00000568097 RPGRQ92834 1020 aaKnown RBP28.33■■■□□ 2.13
HERC2P4-206ENST00000568097 CRAMP1Q96RY5 1269 aa28.33■■■□□ 2.13
HERC2P4-206ENST00000568097 VEGFAP15692 232 aaPredicted RBP28.32■■■□□ 2.12
HERC2P4-206ENST00000568097 CALD1Q05682 793 aaKnown RBP28.32■■■□□ 2.12
HERC2P4-206ENST00000568097 RTKN2Q8IZC4 609 aa28.32■■■□□ 2.12
HERC2P4-206ENST00000568097 DICER1Q9UPY3 1922 aaKnown RBP28.31■■■□□ 2.12
HERC2P4-206ENST00000568097 DDNO94850 711 aaPredicted RBP28.31■■■□□ 2.12
HERC2P4-206ENST00000568097 HCLS1P14317 486 aaPredicted RBP28.31■■■□□ 2.12
HERC2P4-206ENST00000568097 ANKRD13DQ6ZTN6 518 aa28.31■■■□□ 2.12
HERC2P4-206ENST00000568097 MRS2Q9HD23 443 aa28.31■■■□□ 2.12
HERC2P4-206ENST00000568097 WDR90Q96KV7 1748 aa28.3■■■□□ 2.12
HERC2P4-206ENST00000568097 TSPYL6Q8N831 410 aa28.3■■■□□ 2.12
HERC2P4-206ENST00000568097 RBM17Q96I25 401 aaKnown RBP28.3■■■□□ 2.12
HERC2P4-206ENST00000568097 ISCA1Q9BUE6 129 aa28.3■■■□□ 2.12
HERC2P4-206ENST00000568097 HYPKQ9NX55 129 aa28.3■■■□□ 2.12
HERC2P4-206ENST00000568097 ANKRD36CQ5JPF3 1778 aa28.29■■■□□ 2.12
HERC2P4-206ENST00000568097 RNF123Q5XPI4 1314 aa28.29■■■□□ 2.12
HERC2P4-206ENST00000568097 FSTL1Q12841 308 aa28.29■■■□□ 2.12
HERC2P4-206ENST00000568097 DPY19L2Q6NUT2 758 aa28.29■■■□□ 2.12
HERC2P4-206ENST00000568097 WWC1Q8IX03 1113 aa28.29■■■□□ 2.12
HERC2P4-206ENST00000568097 NLRP3Q96P20 1036 aa28.29■■■□□ 2.12
HERC2P4-206ENST00000568097 PHAXQ9H814 394 aaKnown RBP28.29■■■□□ 2.12
HERC2P4-206ENST00000568097 COL4A5P29400 1685 aa28.29■■■□□ 2.12
HERC2P4-206ENST00000568097 ZNF541Q9H0D2 1346 aa28.28■■■□□ 2.12
HERC2P4-206ENST00000568097 ANP32CO43423 234 aa28.28■■■□□ 2.12
HERC2P4-206ENST00000568097 CCDC27Q2M243 656 aa28.28■■■□□ 2.12
HERC2P4-206ENST00000568097 TSR2Q969E8 191 aaKnown RBP28.28■■■□□ 2.12
HERC2P4-206ENST00000568097 PSMD1Q99460 953 aa28.28■■■□□ 2.12
HERC2P4-206ENST00000568097 TRMT112Q9UI30 125 aaKnown RBP28.28■■■□□ 2.12
HERC2P4-206ENST00000568097 ABCC4O15439 1325 aa28.27■■■□□ 2.12
HERC2P4-206ENST00000568097 ATP5J2-PTCD1G3V325 749 aa28.27■■■□□ 2.12
HERC2P4-206ENST00000568097 TCERG1O14776 1098 aaKnown RBP28.27■■■□□ 2.12
HERC2P4-206ENST00000568097 PPEF1O14829 653 aaPredicted RBP28.27■■■□□ 2.12
HERC2P4-206ENST00000568097 IARSP41252 1262 aaKnown RBP28.26■■■□□ 2.11
HERC2P4-206ENST00000568097 APLP1P51693 650 aa28.26■■■□□ 2.11
HERC2P4-206ENST00000568097 HTRA3P83110 453 aa28.26■■■□□ 2.11
HERC2P4-206ENST00000568097 SH3TC1Q8TE82 1336 aa28.25■■■□□ 2.11
HERC2P4-206ENST00000568097 CC2D2BQ6DHV5 1058 aa28.24■■■□□ 2.11
HERC2P4-206ENST00000568097 DNAJC5GQ8N7S2 189 aa28.24■■■□□ 2.11
HERC2P4-206ENST00000568097 SMC1BQ8NDV3 1235 aa28.24■■■□□ 2.11
HERC2P4-206ENST00000568097 FAM89AQ96GI7 184 aa28.23■■■□□ 2.11
HERC2P4-206ENST00000568097 FZD9O00144 591 aa28.22■■■□□ 2.11
HERC2P4-206ENST00000568097 POTEIP0CG38 1075 aa28.22■■■□□ 2.11
HERC2P4-206ENST00000568097 POTEJP0CG39 1038 aa28.22■■■□□ 2.11
HERC2P4-206ENST00000568097 L3MBTL3Q96JM7 780 aaPredicted RBP28.22■■■□□ 2.11
HERC2P4-206ENST00000568097 ATP6V0A2Q9Y487 856 aa28.22■■■□□ 2.11
HERC2P4-206ENST00000568097 TRIM28Q13263 835 aaKnown RBP28.21■■■□□ 2.11
HERC2P4-206ENST00000568097 LAMB2P55268 1798 aa28.2■■■□□ 2.11
HERC2P4-206ENST00000568097 NCBP3Q53F19 620 aaKnown RBP28.19■■■□□ 2.1
HERC2P4-206ENST00000568097 COL4A1P02462 1669 aa28.19■■■□□ 2.1
HERC2P4-206ENST00000568097 RTL5Q5HYW3 569 aaPredicted RBP28.18■■■□□ 2.1
HERC2P4-206ENST00000568097 RIC3Q7Z5B4 369 aa28.18■■■□□ 2.1
HERC2P4-206ENST00000568097 IL16Q14005 1332 aa28.18■■■□□ 2.1
HERC2P4-206ENST00000568097 GOLGA2Q08379 1002 aa28.17■■■□□ 2.1
HERC2P4-206ENST00000568097 CCDC30Q5VVM6 783 aa28.17■■■□□ 2.1
HERC2P4-206ENST00000568097 DDX60Q8IY21 1712 aaKnown RBP28.16■■■□□ 2.1
HERC2P4-206ENST00000568097 GRAPQ13588 217 aa28.16■■■□□ 2.1
HERC2P4-206ENST00000568097 GRIPAP1Q4V328 841 aa28.16■■■□□ 2.1
HERC2P4-206ENST00000568097 GRAPLQ8TC17 118 aaPredicted RBP28.16■■■□□ 2.1
HERC2P4-206ENST00000568097 SALL2Q9Y467 1007 aaPredicted RBP28.16■■■□□ 2.1
HERC2P4-206ENST00000568097 BBOX1O75936 387 aa28.15■■■□□ 2.1
HERC2P4-206ENST00000568097 MYD88Q99836 296 aa28.15■■■□□ 2.1
HERC2P4-206ENST00000568097 TAF1DQ9H5J8 278 aaPredicted RBP28.15■■■□□ 2.1
HERC2P4-206ENST00000568097 SF3B3Q15393 1217 aaKnown RBP28.14■■■□□ 2.1
HERC2P4-206ENST00000568097 DDX46Q7L014 1031 aaKnown RBP28.14■■■□□ 2.1
HERC2P4-206ENST00000568097 SP8Q8IXZ3 490 aa28.14■■■□□ 2.1
HERC2P4-206ENST00000568097 RTFDC1Q9BY42 306 aaPredicted RBP28.14■■■□□ 2.1
HERC2P4-206ENST00000568097 LARGE2Q8N3Y3 721 aa28.13■■■□□ 2.09
HERC2P4-206ENST00000568097 FANCIQ9NVI1 1328 aa28.13■■■□□ 2.09
HERC2P4-206ENST00000568097 IRS4O14654 1257 aaPredicted RBP28.12■■■□□ 2.09
HERC2P4-206ENST00000568097 AOC3Q16853 763 aa28.12■■■□□ 2.09
HERC2P4-206ENST00000568097 TWISTNBQ3B726 338 aaPredicted RBP28.12■■■□□ 2.09
HERC2P4-206ENST00000568097 G2E3Q7L622 706 aa28.12■■■□□ 2.09
HERC2P4-206ENST00000568097 JDP2Q8WYK2 163 aa28.12■■■□□ 2.09
HERC2P4-206ENST00000568097 CELF1Q92879 486 aaKnown RBP28.12■■■□□ 2.09
HERC2P4-206ENST00000568097 METTL22Q9BUU2 404 aaPredicted RBP28.12■■■□□ 2.09
HERC2P4-206ENST00000568097 SPINK5Q9NQ38 1064 aaPredicted RBP28.12■■■□□ 2.09
HERC2P4-206ENST00000568097 GPC2Q8N158 579 aa28.11■■■□□ 2.09
HERC2P4-206ENST00000568097 ZBTB38Q8NAP3 1195 aaPredicted RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms