RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 ERICH4A6NGS2 130 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 GOLIM4O00461 696 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 PRPF40AO75400 957 aaKnown RBP7.02□□□□□ -1.29
CNOT1-211ENST00000567188 IPO7O95373 1038 aaKnown RBP7.02□□□□□ -1.29
CNOT1-211ENST00000567188 ADAMTS13Q76LX8 1427 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 ABCC11Q96J66 1382 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 PDE3AQ14432 1141 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 AMOTQ4VCS5 1084 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 TSPYL6Q8N831 410 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 NKTRP30414 1462 aaKnown RBP7.02□□□□□ -1.29
CNOT1-211ENST00000567188 TNS3Q68CZ2 1445 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 FLT4P35916 1363 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 AKAP4Q5JQC9 854 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 C8orf58Q8NAV2 365 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 CCAR2Q8N163 923 aaKnown RBP7.01□□□□□ -1.29
CNOT1-211ENST00000567188 ANKRD20A12PQ8NF67 263 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 CCNL1Q9UK58 526 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-211ENST00000567188 MNAT1P51948 309 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 IQCEQ6IPM2 695 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 RIMBP2O15034 1052 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 DMTNQ08495 405 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 JAKMIP3Q5VZ66 844 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 UNC5CLQ8IV45 518 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 ROBO1Q9Y6N7 1651 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 SBNO1A3KN83 1393 aa7.01□□□□□ -1.29
CNOT1-211ENST00000567188 INTS3Q68E01 1043 aaKnown RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 ANKIB1Q9P2G1 1089 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 NSD2O96028 1365 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 IFIT2P09913 472 aaKnown RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 ATF5Q9Y2D1 282 aaPredicted RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 C1orf167Q5SNV9 1468 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 KIF1CO43896 1103 aaKnown RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 TUBB4BP68371 445 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 TMEM57Q8N5G2 664 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 FMNL2Q96PY5 1086 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 G3BP1Q13283 466 aaKnown RBP eCLIP7□□□□□ -1.291e-6■■■□□ 16.5
CNOT1-211ENST00000567188 RPGRQ92834 1020 aaKnown RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 LRCH2Q5VUJ6 765 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 SEPT12Q8IYM1 358 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 CCDC97Q96F63 343 aaPredicted RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 PHAXQ9H814 394 aaKnown RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 ARID4AP29374 1257 aaPredicted RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 EN1Q05925 392 aaPredicted RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 RNF168Q8IYW5 571 aaPredicted RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 PLCD3Q8N3E9 789 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 C22orf23Q9BZE7 217 aa7□□□□□ -1.29
CNOT1-211ENST00000567188 TRMT112Q9UI30 125 aaKnown RBP7□□□□□ -1.29
CNOT1-211ENST00000567188 SLFN5Q08AF3 891 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 ATP7BP35670 1465 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 PSDA5PKW4 1024 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-211ENST00000567188 ZKSCAN1P17029 563 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-211ENST00000567188 AP1ARQ63HQ0 302 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 UBXN4Q92575 508 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.99□□□□□ -1.29
CNOT1-211ENST00000567188 CPLX2Q6PUV4 134 aaKnown RBP6.99□□□□□ -1.29
CNOT1-211ENST00000567188 AMOTL1Q8IY63 956 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 DZIP3Q86Y13 1208 aaKnown RBP6.99□□□□□ -1.29
CNOT1-211ENST00000567188 AKAP17AQ02040 695 aaKnown RBP6.99□□□□□ -1.29
CNOT1-211ENST00000567188 TSHZ3Q63HK5 1081 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 ZNF772Q68DY9 489 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-211ENST00000567188 KRT27Q7Z3Y8 459 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 LNPKQ9C0E8 428 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 GTF2F1P35269 517 aaKnown RBP eCLIP6.99□□□□□ -1.296e-8■■■■□ 19.3
CNOT1-211ENST00000567188 KIAA1210Q9ULL0 1709 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 SPATA31A3Q5VYP0 1347 aa6.99□□□□□ -1.29
CNOT1-211ENST00000567188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-211ENST00000567188 A1BGP04217 495 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 GBP6Q6ZN66 633 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 CCDC50Q8IVM0 306 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 F8W031 263 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-211ENST00000567188 GRM1Q13255 1194 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 MAP9Q49MG5 647 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 CCDC43Q96MW1 224 aaKnown RBP6.98□□□□□ -1.29
CNOT1-211ENST00000567188 ST5P78524 1137 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 MAPK8IP2Q13387 824 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-211ENST00000567188 SEPT14Q6ZU15 432 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 XAGE3Q8WTP9 111 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 REREQ9P2R6 1566 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 HIP1O00291 1037 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 EZRP15311 586 aaKnown RBP6.98□□□□□ -1.29
CNOT1-211ENST00000567188 RASSF8Q8NHQ8 419 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 ASAP1Q9ULH1 1129 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 PARP3Q9Y6F1 533 aa6.98□□□□□ -1.29
CNOT1-211ENST00000567188 ERC1Q8IUD2 1116 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 PPM1EQ8WY54 764 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 RSRC1Q96IZ7 334 aaKnown RBP6.97□□□□□ -1.29
CNOT1-211ENST00000567188 NIP7Q9Y221 180 aaKnown RBP eCLIP6.97□□□□□ -1.29
CNOT1-211ENST00000567188 SBNO2Q9Y2G9 1366 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 A6NNZ2 444 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 ERC2O15083 957 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 TUBB8Q3ZCM7 444 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 DNAJC21Q5F1R6 531 aaKnown RBP6.97□□□□□ -1.29
CNOT1-211ENST00000567188 SLC52A2Q9HAB3 445 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 IL1RAPL2Q9NP60 686 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 TRPC5Q9UL62 973 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-211ENST00000567188 ZNF397Q8NF99 534 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-211ENST00000567188 TACO1Q9BSH4 297 aaKnown RBP6.97□□□□□ -1.29
CNOT1-211ENST00000567188 MAP2P11137 1827 aaKnown RBP6.97□□□□□ -1.29
CNOT1-211ENST00000567188 SPATA24Q86W54 205 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 POTEDQ86YR6 584 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms