RNA–Protein interactions for RNA: ENST00000567173.5

STUB1-209, Transcript of STIP1 homology and U-box containing protein 1, human

TSL 3

Gene STUB1, Length 743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STUB1-209	ENST00000567173	RIC3	Q7Z5B4	369 aa		32.9	■■■□□ 2.86
STUB1-209	ENST00000567173	NUTM1	Q86Y26	1132 aa		32.9	■■■□□ 2.86
STUB1-209	ENST00000567173	TTLL6	Q8N841	843 aa		32.9	■■■□□ 2.86
STUB1-209	ENST00000567173	UTP14A	Q9BVJ6	771 aa	Known RBP	32.9	■■■□□ 2.86
STUB1-209	ENST00000567173	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.89	■■■□□ 2.86
STUB1-209	ENST00000567173	TCERG1	O14776	1098 aa	Known RBP	32.89	■■■□□ 2.86
STUB1-209	ENST00000567173	STYK1	Q6J9G0	422 aa		32.89	■■■□□ 2.86
STUB1-209	ENST00000567173	SLC10A5	Q5PT55	438 aa		32.87	■■■□□ 2.85
STUB1-209	ENST00000567173	MASTL	Q96GX5	879 aa		32.87	■■■□□ 2.85
STUB1-209	ENST00000567173	KSR2	Q6VAB6	950 aa		32.86	■■■□□ 2.85
STUB1-209	ENST00000567173	G2E3	Q7L622	706 aa		32.86	■■■□□ 2.85
STUB1-209	ENST00000567173	CDCA7L	Q96GN5	454 aa		32.86	■■■□□ 2.85
STUB1-209	ENST00000567173	CRY2	Q49AN0	593 aa		32.85	■■■□□ 2.85
STUB1-209	ENST00000567173	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.85	■■■□□ 2.85
STUB1-209	ENST00000567173	NPR1	P16066	1061 aa		32.84	■■■□□ 2.85
STUB1-209	ENST00000567173	CNKSR1	Q969H4	720 aa		32.84	■■■□□ 2.85
STUB1-209	ENST00000567173	METTL22	Q9BUU2	404 aa	Predicted RBP	32.84	■■■□□ 2.85
STUB1-209	ENST00000567173	ADCY9	O60503	1353 aa		32.83	■■■□□ 2.85
STUB1-209	ENST00000567173	YY1	P25490	414 aa		32.83	■■■□□ 2.85
STUB1-209	ENST00000567173	FLII	Q13045	1269 aa		32.83	■■■□□ 2.85
STUB1-209	ENST00000567173	SLX4	Q8IY92	1834 aa		32.83	■■■□□ 2.85
STUB1-209	ENST00000567173	CACNA1S	Q13698	1873 aa		32.82	■■■□□ 2.85
STUB1-209	ENST00000567173	PI4KAP2	A4QPH2	592 aa		32.82	■■■□□ 2.84
STUB1-209	ENST00000567173	ATP5J2-PTCD1	G3V325	749 aa		32.82	■■■□□ 2.84
STUB1-209	ENST00000567173	PI4KAP1	Q8N8J0	262 aa		32.82	■■■□□ 2.84
STUB1-209	ENST00000567173	TRMT112	Q9UI30	125 aa	Known RBP	32.82	■■■□□ 2.84
STUB1-209	ENST00000567173	MAP3K2	Q9Y2U5	619 aa		32.82	■■■□□ 2.84
STUB1-209	ENST00000567173	SH3TC1	Q8TE82	1336 aa		32.81	■■■□□ 2.84
STUB1-209	ENST00000567173	ZNF428	Q96B54	188 aa		32.8	■■■□□ 2.84
STUB1-209	ENST00000567173	MYD88	Q99836	296 aa		32.8	■■■□□ 2.84
STUB1-209	ENST00000567173	LAMB2	P55268	1798 aa		32.79	■■■□□ 2.84
STUB1-209	ENST00000567173	HOXA10	P31260	410 aa	Predicted RBP	32.79	■■■□□ 2.84
STUB1-209	ENST00000567173	CCDC191	Q8NCU4	936 aa		32.79	■■■□□ 2.84
STUB1-209	ENST00000567173	ARHGAP27	Q6ZUM4	889 aa		32.78	■■■□□ 2.84
STUB1-209	ENST00000567173	NLRP3	Q96P20	1036 aa		32.78	■■■□□ 2.84
STUB1-209	ENST00000567173	DDX60	Q8IY21	1712 aa	Known RBP	32.77	■■■□□ 2.84
STUB1-209	ENST00000567173	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.76	■■■□□ 2.83
STUB1-209	ENST00000567173	PRPF40B	Q6NWY9	871 aa	Known RBP	32.76	■■■□□ 2.83
STUB1-209	ENST00000567173	SYNE4	Q8N205	404 aa		32.76	■■■□□ 2.83
STUB1-209	ENST00000567173	SBF1	O95248	1867 aa		32.76	■■■□□ 2.83
STUB1-209	ENST00000567173	CT47B1	P0C2W7	299 aa	Predicted RBP	32.75	■■■□□ 2.83
STUB1-209	ENST00000567173	ALDH1B1	P30837	517 aa		32.75	■■■□□ 2.83
STUB1-209	ENST00000567173	FKBP5	Q13451	457 aa	Predicted RBP	32.75	■■■□□ 2.83
STUB1-209	ENST00000567173	C3orf67	Q6ZVT6	689 aa		32.75	■■■□□ 2.83
STUB1-209	ENST00000567173	FER1L6	Q2WGJ9	1857 aa		32.74	■■■□□ 2.83
STUB1-209	ENST00000567173	CWC25	Q9NXE8	425 aa	Predicted RBP	32.74	■■■□□ 2.83
STUB1-209	ENST00000567173	IGKV5-2	P06315	115 aa		32.73	■■■□□ 2.83
STUB1-209	ENST00000567173	NEXN	Q0ZGT2	675 aa		32.73	■■■□□ 2.83
STUB1-209	ENST00000567173	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.73	■■■□□ 2.83
STUB1-209	ENST00000567173	C7orf43	Q8WVR3	580 aa		32.73	■■■□□ 2.83
STUB1-209	ENST00000567173	RPGR	Q92834	1020 aa	Known RBP	32.73	■■■□□ 2.83
STUB1-209	ENST00000567173	FAM89A	Q96GI7	184 aa		32.73	■■■□□ 2.83
STUB1-209	ENST00000567173	HCLS1	P14317	486 aa	Predicted RBP	32.72	■■■□□ 2.83
STUB1-209	ENST00000567173	CRAMP1	Q96RY5	1269 aa		32.72	■■■□□ 2.83
STUB1-209	ENST00000567173	DNAAF4	Q8WXU2	420 aa		32.71	■■■□□ 2.83
STUB1-209	ENST00000567173	C21orf2	O43822	256 aa		32.7	■■■□□ 2.83
STUB1-209	ENST00000567173	PCCA	P05165	728 aa	Predicted RBP	32.7	■■■□□ 2.83
STUB1-209	ENST00000567173	SOGA3	Q5TF21	947 aa		32.7	■■■□□ 2.83
STUB1-209	ENST00000567173	ALDH1L2	Q3SY69	923 aa		32.69	■■■□□ 2.82
STUB1-209	ENST00000567173	MRPL50	Q8N5N7	158 aa	Known RBP	32.69	■■■□□ 2.82
STUB1-209	ENST00000567173	RBM17	Q96I25	401 aa	Known RBP	32.69	■■■□□ 2.82
STUB1-209	ENST00000567173	NEURL1B	A8MQ27	555 aa		32.68	■■■□□ 2.82
STUB1-209	ENST00000567173	HSP90B1	P14625	803 aa	Known RBP	32.68	■■■□□ 2.82
STUB1-209	ENST00000567173	SSH1	Q8WYL5	1049 aa		32.68	■■■□□ 2.82
STUB1-209	ENST00000567173	IRS4	O14654	1257 aa	Predicted RBP	32.67	■■■□□ 2.82
STUB1-209	ENST00000567173	CCDC88A	Q3V6T2	1871 aa		32.66	■■■□□ 2.82
STUB1-209	ENST00000567173	SF3B3	Q15393	1217 aa	Known RBP	32.66	■■■□□ 2.82
STUB1-209	ENST00000567173	LINS1	Q8NG48	757 aa		32.66	■■■□□ 2.82
STUB1-209	ENST00000567173	ZBED9	Q6R2W3	1325 aa		32.66	■■■□□ 2.82
STUB1-209	ENST00000567173	NFKBIE	O00221	500 aa		32.65	■■■□□ 2.82
STUB1-209	ENST00000567173	CWF19L2	Q2TBE0	894 aa	Known RBP	32.65	■■■□□ 2.82
STUB1-209	ENST00000567173	LTBP3	Q9NS15	1303 aa		32.65	■■■□□ 2.82
STUB1-209	ENST00000567173	CDHR2	Q9BYE9	1310 aa		32.64	■■■□□ 2.82
STUB1-209	ENST00000567173	RTL5	Q5HYW3	569 aa	Predicted RBP	32.63	■■■□□ 2.81
STUB1-209	ENST00000567173	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.63	■■■□□ 2.81
STUB1-209	ENST00000567173	PTPRC	P08575	1304 aa		32.62	■■■□□ 2.81
STUB1-209	ENST00000567173		F6X3S4	739 aa		32.62	■■■□□ 2.81
STUB1-209	ENST00000567173	GCKR	Q14397	625 aa		32.62	■■■□□ 2.81
STUB1-209	ENST00000567173	CCDC93	Q567U6	631 aa		32.62	■■■□□ 2.81
STUB1-209	ENST00000567173	MYH3	P11055	1940 aa		32.61	■■■□□ 2.81
STUB1-209	ENST00000567173	ABCC4	O15439	1325 aa		32.61	■■■□□ 2.81
STUB1-209	ENST00000567173	RASSF7	Q02833	373 aa		32.61	■■■□□ 2.81
STUB1-209	ENST00000567173	BEND3	Q5T5X7	828 aa		32.61	■■■□□ 2.81
STUB1-209	ENST00000567173	C9orf131	Q5VYM1	1079 aa		32.61	■■■□□ 2.81
STUB1-209	ENST00000567173	CC2D2B	Q6DHV5	1058 aa		32.61	■■■□□ 2.81
STUB1-209	ENST00000567173	DICER1	Q9UPY3	1922 aa	Known RBP	32.61	■■■□□ 2.81
STUB1-209	ENST00000567173	TAF1	P21675	1872 aa		32.61	■■■□□ 2.81
STUB1-209	ENST00000567173	SNED1	Q8TER0	1413 aa		32.6	■■■□□ 2.81
STUB1-209	ENST00000567173		H7C1W4	665 aa		32.6	■■■□□ 2.81
STUB1-209	ENST00000567173	LMNB1	P20700	586 aa		32.6	■■■□□ 2.81
STUB1-209	ENST00000567173	BRPF1	P55201	1214 aa	Predicted RBP	32.6	■■■□□ 2.81
STUB1-209	ENST00000567173	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.6	■■■□□ 2.81
STUB1-209	ENST00000567173	PDE8A	O60658	829 aa		32.59	■■■□□ 2.81
STUB1-209	ENST00000567173	BBOX1	O75936	387 aa		32.59	■■■□□ 2.81
STUB1-209	ENST00000567173	DDX46	Q7L014	1031 aa	Known RBP	32.59	■■■□□ 2.81
STUB1-209	ENST00000567173	RTKN2	Q8IZC4	609 aa		32.59	■■■□□ 2.81
STUB1-209	ENST00000567173	PRELP	P51888	382 aa		32.58	■■■□□ 2.81
STUB1-209	ENST00000567173	GRIPAP1	Q4V328	841 aa		32.58	■■■□□ 2.81
STUB1-209	ENST00000567173	TAOK3	Q9H2K8	898 aa		32.58	■■■□□ 2.81
STUB1-209	ENST00000567173	PPEF1	O14829	653 aa	Predicted RBP	32.57	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms